Experiment set3IT021 for Pseudomonas simiae WCS417

Compare to:

Sodium octanoate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PS417_00725 -5.7 -7.8 RND transporter conserved
PS417_22065 -5.6 -10.6 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) conserved
PS417_00710 -5.1 -14.6 fusaric acid resistance protein conserved
PS417_25960 -4.2 -12.7 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) conserved
PS417_00720 -4.1 -10.4 membrane protein conserved
PS417_00715 -3.6 -7.8 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) (from data) conserved
PS417_17390 -3.6 -6.3 DSBA oxidoreductase compare
PS417_21010 -3.5 -7.6 ribonuclease activity regulator protein RraA conserved
PS417_17395 -3.2 -11.3 MFS transporter compare
PS417_25975 -3.1 -7.4 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) conserved
PS417_24810 -3.0 -9.1 aldehyde dehydrogenase compare
PS417_24805 -2.9 -13.8 Fis family transcriptional regulator compare
PS417_04735 -2.5 -7.5 LysR family transcriptional regulator conserved
PS417_08430 -2.5 -9.3 phospho-2-dehydro-3-deoxyheptonate aldolase conserved
PS417_08665 -2.4 -5.9 molybdopterin-guanine dinucleotide biosynthesis protein A compare
PS417_02725 -2.4 -5.1 hypothetical protein compare
PS417_19965 -2.3 -11.7 histidine kinase compare
PS417_06060 -2.3 -11.3 phosphoenolpyruvate carboxylase conserved
PS417_07270 -2.2 -6.0 LysR family transcriptional regulator conserved
PS417_11700 -1.9 -11.3 ligand-gated channel compare
PS417_13120 -1.8 -7.1 aspartyl beta-hydroxylase conserved
PS417_03625 -1.8 -7.2 lipid A 3-O-deacylase compare
PS417_01265 -1.8 -10.6 CbbBc protein conserved
PS417_17420 -1.7 -7.5 ethanol oxidation regulatory protein ercA (from data) compare
PS417_25920 -1.6 -7.3 pyrroloquinoline quinone biosynthesis protein PqqF compare
PS417_21395 -1.6 -7.7 radical SAM protein compare
PS417_10815 -1.2 -5.6 TetR family transcriptional regulator compare
PS417_04485 +1.0 6.2 hypothetical protein compare
PS417_23890 +1.4 6.3 ATPase compare
PS417_19995 +1.9 9.3 Long-chain fatty acid transport protein compare


Specific phenotypes for carbon source Sodium octanoate across organisms