Experiment set3IT021 for Agrobacterium fabrum C58

Compare to:

Beta-alanine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu2040 -6.3 -4.4 phosphoserine phosphatase compare
Atu0035 -6.3 -12.1 phosphoenolpyruvate carboxykinase compare
Atu3707 -6.2 -4.2 phosphoserine aminotransferase compare
Atu1446 -5.8 -4.0 two component response regulator compare
Atu3706 -5.4 -10.3 D-3-phosphoglycerate dehydrogenase compare
Atu0679 -5.4 -8.2 ATP phosphoribosyltransferase compare
Atu2791 -5.2 -8.9 3-isopropylmalate dehydrogenase compare
Atu0043 -5.1 -3.5 imidazoleglycerol-phosphate dehydratase compare
Atu1750 -5.1 -5.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu3740 -4.9 -11.4 fructose bisphosphate aldolase compare
Atu2264 -4.9 -16.0 2-isopropylmalate synthase compare
Atu0099 -4.8 -12.1 prephenate dehydratase compare
Atu3469 -4.8 -3.3 phosphoglyceromutase compare
Atu2718 -4.7 -9.1 homoserine O-succinyltransferase compare
Atu1845 -4.6 -5.0 phosphoribosylformylglycinamidine synthase I compare
Atu2709 -4.6 -17.3 3-isopropylmalate dehydratase, large subunit compare
Atu4505 -4.6 -10.4 LacI family transcriptional regulator compare
Atu3291 -4.6 -8.8 Lpr family transcriptional regulator compare
Atu0678 -4.6 -7.6 histidyl-tRNA synthetase compare
Atu2650 -4.6 -12.2 glycerol-3-phosphate dehydrogenase compare
Atu1844 -4.5 -4.8 Phosphoribosylformylglycinamidine synthetase compare
Atu1687 -4.5 -13.2 anthranilate phosphoribosyltransferase compare
Atu2036 -4.5 -17.3 acetolactate synthase III, large subunit compare
Atu0038 -4.4 -4.9 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2289 -4.4 -18.4 anthranilate synthase component I and II compare
Atu1688 -4.4 -7.9 indole-3-glycerol-phosphate synthase compare
Atu1588 -4.4 -11.6 homoserine dehydrogenase compare
Atu0039 -4.4 -3.0 imidazoleglycerol-phosphate synthase cyclase compare
Atu0486 -4.4 -6.6 dihydroorotate dehydrogenase compare
Atu2790 -4.3 -3.8 3-isopropylmalate dehydratase, small subunit compare
Atu3328 -4.2 -12.6 aldehyde dehydrogenase compare
Atu0041 -4.1 -4.0 glutamine amidotransferase compare
Atu1620 -4.1 -12.8 triosephosphate isomerase compare
Atu0298 -4.1 -9.5 orotidine 5 compare
Atu1205 -4.1 -15.1 threonine dehydratase compare
Atu0432 -4.1 -9.5 O-succinylhomoserine sulfhydrylase compare
Atu0537 -4.0 -8.5 histidinol dehydrogenase compare
Atu0400 -4.0 -6.2 orotate phosphoribosyltransferase compare
Atu0017 -4.0 -4.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1075 -3.9 -9.4 amidophosphoribosyltransferase compare
Atu2747 -3.9 -16.1 hypothetical protein compare
Atu0647 -3.9 -9.9 phosphoribosylamine--glycine ligase compare
Atu3739 -3.8 -4.5 phosphoglycerate kinase compare
Atu3329 -3.7 -14.7 beta alanine--pyruvate transaminase conserved
Atu3293 -3.6 -11.4 D-amino acid dehydrogenase small subunit conserved
Atu1030 -3.6 -3.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1307 -3.6 -8.0 dihydroorotase compare
Atu3885 -3.5 -10.9 inositol monophosphatase compare
Atu3755 -3.4 -7.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1140 -3.4 -4.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3754 -3.3 -10.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0205 -3.3 -12.7 methylmalonate-semialdehyde dehydrogenase compare
Atu0723 -3.3 -3.1 FAD dependent oxidoreductase compare
Atu0030 -3.3 -2.5 phosphocarrier protein HPr compare
Atu0399 -3.3 -7.9 dihydroorotase compare
Atu3292 -3.1 -15.2 alanine racemase compare
Atu1308 -3.1 -8.3 aspartate carbamoyl transferase catalytic subunit compare
Atu0346 -3.1 -4.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2115 -3.1 -11.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1141 -3.0 -7.4 Phosphoribosylglycinamide synthetase compare
Atu2015 -3.0 -12.8 aminotransferase compare
Atu1850 -2.9 -2.6 phosphoribosylformylglycinamidine synthetase II compare
Atu1445 -2.9 -7.1 two component sensor kinase compare
Atu0040 -2.8 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0207 -2.8 -13.2 transcriptional regulator, LysR family compare
Atu1686 -2.7 -15.9 peptidyl-prolyl cis-trans isomerse D compare
Atu1359 -2.6 -1.9 dnaK deletion suppressor protein compare
Atu3783 -2.6 -16.2 glutamate synthase subunit beta compare
Atu1577 -2.5 -7.1 ABC transporter, substrate binding protein (amino acid) compare
Atu4096 -2.5 -7.2 nicotinate-nucleotide pyrophosphorylase compare
Atu3784 -2.4 -19.9 glutamate synthase large subunit compare
Atu0332 -2.4 -11.0 RNA polymerase sigma-54 factor compare
Atu6114 -2.3 -2.6 hypothetical protein compare
Atu1456 -2.2 -11.2 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1589 -2.1 -5.5 aminotransferase, class I compare
Atu3482 -2.0 -8.4 pantoate--beta-alanine ligase compare
Atu0876 -2.0 -2.7 superoxide dismutase compare
Atu4097 -1.9 -9.6 L-aspartate oxidase compare
Atu4173 -1.8 -3.6 phosphoenolpyruvate-protein phosphotransferase compare
Atu1463 -1.8 -8.4 glycine cleavage system component H compare
Atu2155 -1.8 -13.5 methionine synthase compare
Atu4098 -1.8 -9.5 quinolinate synthetase compare
Atu1454 -1.8 -6.3 siroheme synthase compare
Atu1579 -1.7 -9.9 ABC transporter, membrane spanning protein (amino acid) compare
Atu0029 -1.7 -6.7 S-adenosylhomocysteine hydrolase compare
Atu2548 -1.7 -11.5 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1464 -1.7 -6.1 glycine cleavage system T protein, aminomethyltransferase compare
Atu1455 -1.7 -2.6 hypothetical protein compare
Atu1580 -1.7 -8.8 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu3663 -1.6 -2.1 hypothetical protein compare
Atu4711 -1.6 -4.7 two component sensor kinase compare
Atu3483 -1.6 -6.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1748 -1.5 -8.9 NIFU-like protein compare
Atu1462 -1.5 -9.3 glycine cleavage system protein P2 compare
Atu1163 -1.5 -2.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1578 -1.5 -5.7 ABC transporter, membrane spanning protein (amino acid) compare
Atu8115 -1.4 -5.1 Hypothetical Protein compare
Atu5430 -1.4 -1.3 hypothetical protein compare
Atu1457 -1.4 -1.8 hypothetical protein compare
Atu3296 -1.3 -7.7 two component response regulator for C4-dicarboxylate transport compare
Atu1439 -1.3 -2.7 hypothetical protein compare
Atu3298 -1.3 -7.5 C4-dicarboxylate transporter DctA compare
Atu3290 -1.3 -6.6 phosphomethylpyrimidine kinase compare
Atu6098 -1.3 -0.8 transcriptional regulator, HTH family compare
Atu3731 -1.3 -6.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu3120 -1.3 -1.6 hypothetical protein compare
Atu0809 -1.2 -2.0 hypothetical protein compare
Atu3297 -1.2 -8.2 two component sensor kinase for C4-dicarboxylate transport compare
Atu2569 -1.2 -7.8 thiamine biosynthesis protein compare
Atu0086 -1.2 -1.5 ribosome-binding factor A compare
Atu0641 -1.1 -3.4 hypothetical protein compare
Atu2207 -1.1 -2.0 two component sensor kinase compare
Atu3908 -1.1 -7.0 GntR family transcriptional regulator compare
Atu3468 -1.1 -1.1 hypothetical protein compare
Atu0188 -1.1 -3.4 ABC transporter, membrane spanning protein (peptide) compare
Atu0189 -1.1 -3.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0536 -1.1 -5.6 hypothetical protein compare
Atu1573 -1.1 -2.1 hypothetical protein compare
Atu3712 -1.1 -1.6 hypothetical protein compare
Atu8034 -1.1 -3.6 hypothetical protein compare
Atu8138 -1.0 -1.9 hypothetical protein compare
Atu3288 -1.0 -5.1 hydroxyethylthiazole kinase compare
Atu1570 -1.0 -1.0 hypothetical protein compare
Atu3912 -1.0 -4.9 hypothetical protein compare
Atu3008 -1.0 -1.0 hypothetical protein compare
Atu6036 -1.0 -0.7 entry-exclusion protein compare
Atu3763 -1.0 -1.8 hypothetical protein compare
Atu0190 -0.9 -5.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1062 -0.9 -1.6 phosphatidylserine synthase compare
Atu0141 -0.9 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu0690 -0.9 -2.7 hypothetical protein compare
Atu0413 -0.9 -0.9 stress induced protein compare
Atu1219 -0.9 -1.0 hypothetical protein compare
Atu3009 -0.9 -1.1 exopolysaccharide production protein compare
Atu0434 -0.8 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2426 -0.8 -5.3 ABC transporter, membrane spanning protein (branched chain amino acid) compare
Atu3287 -0.8 -3.1 thiamine biosynthesis associated protein compare
Atu4873 -0.8 -4.7 TetR family transcriptional regulator compare
Atu0837 -0.8 -3.7 transcriptional regulator, MarR family compare
Atu0142 -0.8 -2.0 cytochrome o ubiquinol oxidase subunit II compare
Atu2800 -0.8 -2.2 precorrin-3B C17-methyltransferase compare
Atu4217 -0.8 -1.8 TetR family transcriptional regulator compare
Atu0803 -0.8 -6.6 pyruvate,orthophosphate dikinase compare
Atu2205 -0.8 -2.4 transcriptional regulator, MarR family compare
Atu2376 -0.8 -0.6 hypothetical protein compare
Atu0031 -0.8 -1.2 PTS system, IIA component compare
Atu8052 -0.8 -1.0 hypothetical protein compare
Atu2427 -0.8 -3.9 ABC transporter, membrane spanning protein compare
Atu0953 -0.8 -0.7 hypothetical protein compare
Atu4702 -0.8 -4.9 GntR family transcriptional regulator compare
Atu5045 -0.8 -1.5 hypothetical protein compare
Atu4773 -0.7 -1.6 two component response regulator compare
Atu2710 -0.7 -4.4 hypothetical protein compare
Atu3913 -0.7 -4.3 biotin carboxylase compare
Atu0961 -0.7 -2.6 hypothetical protein compare
Atu2424 -0.7 -4.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0354 -0.7 -1.6 ferric uptake regulator compare
Atu0845 -0.7 -2.7 hypothetical protein compare
Atu2425 -0.7 -4.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0361 -0.7 -1.2 transcriptional regulator compare
Atu0977 -0.7 -2.1 serine protease DO-like protease compare
Atu1774 -0.7 -3.1 ABC transporter, substrate binding protein (peptide) compare
Atu6159 -0.7 -1.5 hypothetical protein compare
Atu2808 -0.7 -3.6 cobyric acid synthase compare
Atu2762 -0.7 -2.6 hypothetical protein compare
Atu0331 -0.7 -1.5 sigma-54 modulation protein compare
Atu2017 -0.7 -0.8 hypothetical protein compare
Atu2433 -0.7 -1.1 hypothetical protein compare
Atu2163 -0.7 -1.1 hypothetical protein compare
Atu1619 -0.7 -2.0 protein-export membrane protein SECG compare
Atu1364 -0.7 -2.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1447 -0.7 -1.9 two component sensor kinase compare
Atu1444 -0.7 -3.3 nitrogen regulation protein compare
Atu5448 -0.7 -2.2 hypothetical protein compare
Atu3773 -0.6 -2.2 hypothetical protein compare
Atu2801 -0.6 -1.7 precorrin-2 C20 methyltransferase compare
Atu2200 -0.6 -2.1 cold shock protein compare
Atu0170 -0.6 -3.2 hypothetical protein compare
Atu4391 -0.6 -1.2 nitric oxide reductase NorE protein compare
Atu1028 -0.6 -1.2 hypothetical protein compare
Atu2694 -0.6 -1.9 hypothetical protein compare
Atu3759 -0.6 -1.2 hypothetical protein compare
Atu3031 -0.6 -1.0 hypothetical protein compare
Atu3289 -0.6 -1.5 thiamine-phosphate pyrophosphorylase compare
Atu0025 -0.6 -1.6 hypothetical protein compare
Atu2758 -0.6 -4.7 ammonium transporter compare
Atu0280 -0.6 -1.5 hypothetical protein compare
Atu1149 -0.6 -0.9 adenylate cyclase compare
Atu0149 -0.6 -2.2 enoyl-(acyl-carrier-protein) reductase compare
Atu2416 -0.6 -4.0 glutamine synthetase compare
Atu4469 -0.6 -1.4 iron ABC transporter permease compare
Atu2809 -0.6 -3.9 cobalamin biosynthesis protein compare
Atu2793 -0.6 -2.5 cobyrinic acid a,c-diamide synthase compare
Atu8203 -0.6 -1.7 hypothetical protein compare
Atu0846 -0.6 -2.0 transcriptional regulator, MarR family compare
Atu1469 -0.6 -1.7 hypothetical protein compare
Atu2832 -0.5 -2.0 tRNA modification GTPase compare
Atu5142 -0.5 -0.8 hypothetical protein compare
Atu4346 -0.5 -3.1 hypothetical protein compare
Atu4317 -0.5 -1.7 TetR family transcriptional regulator compare


Specific Phenotypes

For 13 genes in this experiment

For nitrogen source Beta-alanine in Agrobacterium fabrum C58

For nitrogen source Beta-alanine across organisms