Experiment set3IT020 for Pseudomonas syringae pv. syringae B728a ΔmexB
KB with Mitomycin C 0.05 ug/ml
Group: stressMedia: KB + Mitomycin C (0.05 ug/ml)
Culturing: SyringaeB728a_mexBdelta_ML3, 24 well microplate, Aerobic, at 28 (C), shaken=250 rpm
By: Tyler Helmann on 2/15/18
Media components: 10 g/L Bacto Peptone, 1.5 g/L Potassium phosphate dibasic, 15 g/L Glycerol, 0.6 g/L Magnesium sulfate
Specific Phenotypes
For 54 genes in this experiment
For stress Mitomycin C in Pseudomonas syringae pv. syringae B728a ΔmexB
For stress Mitomycin C across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| DNA repair, UvrABC system | 3 |
| DNA-replication | 1 |
| DNA repair, bacterial | 1 |
| Ribosome biogenesis bacterial | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Purine metabolism
- Pyrimidine metabolism
- Methionine metabolism
- Lipopolysaccharide biosynthesis
- Folate biosynthesis
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| pseudouridine degradation | 2 | 1 | 1 |