Experiment set3IT020 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Spectinomycin dihydrochloride pentahydrate 0.08 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_17500 +2.2 13.2 molecular chaperone DnaK compare
CA264_11135 +1.9 10.1 DUF2179 domain-containing protein compare
CA264_15850 +1.9 10.6 IclR family transcriptional regulator compare
CA264_04820 +1.7 10.5 deoxyhypusine synthase compare
CA264_01425 +1.7 11.4 RelA/SpoT family protein compare
CA264_07665 +1.6 13.3 sulfurtransferase compare
CA264_07660 +1.6 11.8 hypothetical protein compare
CA264_00015 +1.6 11.0 hypothetical protein compare
CA264_15150 +1.5 4.8 hypothetical protein compare
CA264_04605 +1.5 11.6 hypothetical protein compare
CA264_15520 +1.3 5.7 hypothetical protein compare
CA264_17020 +1.2 6.3 methyltransferase type 11 compare
CA264_01265 +1.2 3.3 50S ribosomal protein L9 compare
CA264_12415 +1.2 8.9 hypothetical protein compare
CA264_17640 +1.1 4.9 acyl-CoA dehydrogenase compare
CA264_08710 +1.1 6.9 sugar kinase compare
CA264_15160 +1.1 4.2 nucleoside triphosphate pyrophosphohydrolase compare
CA264_04600 +1.1 9.7 hypothetical protein compare
CA264_17505 +1.0 2.5 SMC-Scp complex subunit ScpB compare
CA264_20505 +1.0 5.1 hypothetical protein compare
CA264_01815 +1.0 2.8 N-acetyltransferase compare
CA264_16385 +1.0 5.7 DUF4271 domain-containing protein compare
CA264_05400 +1.0 5.4 MarR family transcriptional regulator compare
CA264_02720 +1.0 7.6 peroxiredoxin compare
CA264_17030 +0.9 7.4 hypothetical protein compare
CA264_20055 +0.9 1.9 peptidase M41 compare
CA264_12340 +0.9 3.8 acetyltransferase compare
CA264_08715 +0.9 6.8 glucosamine-6-phosphate deaminase compare
CA264_12390 +0.9 7.1 hypothetical protein compare
CA264_00660 +0.9 5.3 hypothetical protein compare
CA264_10005 +0.9 2.9 hypothetical protein compare
CA264_10930 +0.8 2.8 methylglutaconyl-CoA hydratase compare
CA264_14890 +0.8 2.9 triose-phosphate isomerase compare
CA264_07670 +0.8 6.4 hypothetical protein compare
CA264_04475 +0.8 1.9 cold-shock protein compare
CA264_14455 +0.8 3.1 ribosome maturation factor compare
CA264_05080 +0.8 5.3 tryptophan synthase subunit beta compare
CA264_04595 +0.7 6.2 hypothetical protein compare
CA264_05610 +0.7 4.5 rRNA methyltransferase compare
CA264_17305 +0.7 3.2 hypothetical protein compare
CA264_16490 +0.7 3.9 glucose-1-phosphate thymidylyltransferase compare
CA264_05170 +0.7 4.8 phosphohydrolase compare
CA264_10525 +0.7 1.9 molybdenum cofactor biosynthesis protein MoaE compare
CA264_12410 +0.7 1.9 serine acetyltransferase compare
CA264_20120 +0.7 1.6 hypothetical protein compare
CA264_06600 +0.7 5.4 glycosyltransferase compare
CA264_12400 +0.7 5.0 hypothetical protein compare
CA264_05650 +0.7 4.8 tryptophan 2,3-dioxygenase compare
CA264_18665 +0.7 3.4 prenyltransferase compare
CA264_03615 +0.7 3.7 cold-shock protein compare
CA264_15045 +0.7 4.5 acetyl-CoA acetyltransferase compare
CA264_04295 +0.7 5.6 hypothetical protein compare
CA264_06990 +0.7 5.6 PA-phosphatase compare
CA264_04300 +0.7 4.5 ABC transporter substrate-binding protein compare
CA264_19010 +0.7 6.0 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_04290 +0.7 4.5 ABC transporter permease compare
CA264_20555 +0.7 3.0 6-pyruvoyl tetrahydrobiopterin synthase compare
CA264_00665 +0.7 4.2 RNA polymerase subunit sigma-24 compare
CA264_15050 +0.7 5.8 3-hydroxyacyl-CoA dehydrogenase compare
CA264_17560 +0.6 4.7 hypothetical protein compare
CA264_06370 +0.6 5.3 MATE family efflux transporter conserved
CA264_11715 +0.6 1.6 hypothetical protein compare
CA264_01970 +0.6 3.3 multidrug ABC transporter ATP-binding protein compare
CA264_11915 +0.6 2.0 peptidoglycan synthetase compare
CA264_18860 +0.6 4.7 TIGR00374 family protein compare
CA264_21400 +0.6 5.5 hypothetical protein compare
CA264_12860 +0.6 1.8 hypothetical protein compare
CA264_20130 +0.6 3.6 hypothetical protein compare
CA264_04460 +0.6 1.9 ABC transporter compare
CA264_12195 +0.6 1.5 DoxX family protein compare
CA264_12405 +0.6 4.1 hypothetical protein compare
CA264_11295 +0.6 4.3 hypothetical protein compare
CA264_20690 +0.6 4.5 methylmalonyl-CoA mutase compare
CA264_07000 +0.6 4.1 DUF4833 domain-containing protein compare
CA264_09635 +0.6 3.9 hypothetical protein compare
CA264_01795 +0.6 2.4 hypothetical protein compare
CA264_04900 +0.6 2.8 bacillithiol biosynthesis deacetylase BshB1 compare
CA264_01560 +0.6 1.4 hypothetical protein compare
CA264_12430 +0.6 3.7 nucleotidyltransferase compare
CA264_12940 +0.6 2.7 alcohol dehydrogenase compare
CA264_15035 +0.6 4.0 acyl-CoA dehydrogenase compare
CA264_17735 +0.6 4.2 antibiotic ABC transporter ATP-binding protein compare
CA264_17545 +0.6 4.5 single-stranded-DNA-specific exonuclease RecJ compare
CA264_16360 +0.6 3.2 gliding motility protein GldM compare
CA264_21380 +0.6 2.3 hypothetical protein compare
CA264_11725 +0.6 1.4 hypothetical protein compare
CA264_15515 +0.6 2.5 peptidase compare
CA264_14450 +0.6 2.5 endonuclease/exonuclease/phosphatase compare
CA264_17290 +0.5 3.6 methyltransferase compare
CA264_21460 +0.5 1.6 hypothetical protein compare
CA264_00860 +0.5 3.7 CPBP family intramembrane metalloprotease compare
CA264_09810 +0.5 4.6 ABC transporter ATP-binding protein compare
CA264_10860 +0.5 1.2 hypothetical protein compare
CA264_13645 +0.5 2.3 hypothetical protein compare
CA264_17780 +0.5 1.4 hypothetical protein compare
CA264_21090 +0.5 2.5 hypothetical protein compare
CA264_19615 +0.5 1.8 hypothetical protein compare
CA264_16775 +0.5 2.8 metal-dependent hydrolase compare
CA264_19670 +0.5 2.0 NADPH:quinone oxidoreductase compare
CA264_01810 +0.5 2.3 hypothetical protein compare
CA264_18040 +0.5 3.5 kynurenine 3-monooxygenase compare
CA264_11300 +0.5 4.0 mechanosensitive ion channel protein MscS compare
CA264_01855 +0.5 2.5 carbonic anhydrase compare
CA264_01180 +0.5 2.0 hypothetical protein compare
CA264_14615 +0.5 2.9 MBL fold hydrolase compare
CA264_19005 +0.5 3.7 SusC/RagA family TonB-linked outer membrane protein compare
CA264_19555 +0.5 2.9 GNAT family N-acetyltransferase compare
CA264_05175 +0.5 1.6 hypothetical protein compare
CA264_15290 +0.5 3.9 alpha/beta hydrolase compare
CA264_00730 +0.5 1.7 hypothetical protein compare
CA264_21255 +0.5 2.6 hypothetical protein compare
CA264_20695 +0.5 4.1 methylmalonyl-CoA mutase compare
CA264_00295 +0.5 2.2 hypothetical protein compare
CA264_09730 +0.5 1.8 hypothetical protein compare
CA264_09805 +0.5 3.5 hypothetical protein compare
CA264_13765 +0.5 3.2 DNA-binding transcriptional regulator OxyR compare
CA264_03760 +0.5 3.1 hypothetical protein compare
CA264_04765 +0.5 2.8 chromosome partitioning protein ParA compare
CA264_20595 +0.5 2.8 acyl-CoA desaturase compare
CA264_07890 +0.5 1.8 hypothetical protein compare
CA264_20625 +0.5 3.5 methylcrotonoyl-CoA carboxylase compare
CA264_12600 +0.5 2.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
CA264_12425 +0.5 2.6 CMP-N-acetylneuraminic acid synthetase compare
CA264_02730 +0.5 3.7 hypothetical protein compare
CA264_05930 +0.5 1.6 glyoxalase compare
CA264_19970 +0.5 1.0 hypothetical protein compare
CA264_13085 +0.5 2.9 methylmalonyl-CoA carboxyltransferase compare
CA264_20930 +0.5 1.2 hypothetical protein compare
CA264_05085 +0.5 3.4 tryptophan synthase subunit alpha compare
CA264_13015 +0.5 3.6 sensor histidine kinase compare
CA264_12385 +0.5 3.1 glycosyl transferase compare
CA264_15025 +0.5 2.6 acyl-CoA thioesterase compare
CA264_15010 +0.5 2.2 gliding motility lipoprotein GldD compare
CA264_21225 +0.5 1.1 hypothetical protein compare
CA264_16375 +0.5 2.1 hypothetical protein compare
CA264_14505 +0.5 3.6 hypothetical protein compare
CA264_07645 +0.5 1.8 hypothetical protein compare
CA264_13030 +0.5 1.6 cysteine methyltransferase compare
CA264_20945 +0.5 1.7 hypothetical protein compare
CA264_15400 +0.5 1.8 short-chain dehydrogenase compare
CA264_21065 +0.5 1.2 transcriptional regulator compare
CA264_08780 +0.4 3.5 hypothetical protein compare
CA264_14910 +0.4 0.9 30S ribosomal protein THX compare
CA264_20000 +0.4 0.9 cold-shock protein compare
CA264_04415 +0.4 1.0 hypothetical protein compare
CA264_09765 +0.4 2.3 NAD(P)H-dependent oxidoreductase compare
CA264_14815 +0.4 0.7 transcriptional regulator compare
CA264_09225 +0.4 2.7 Fe-S oxidoreductase compare
CA264_06330 +0.4 1.1 cation:proton antiporter compare
CA264_15750 +0.4 1.8 hypothetical protein compare
CA264_03870 +0.4 1.1 transcription elongation factor GreA compare
CA264_05925 +0.4 3.6 hypothetical protein compare
CA264_08985 +0.4 2.8 glycosyl transferase family 2 compare
CA264_12155 +0.4 0.8 histidine phosphatase family protein compare
CA264_19785 +0.4 3.6 TonB-dependent receptor compare
CA264_10925 +0.4 1.8 fatty acid hydroxylase compare
CA264_06400 +0.4 3.1 hypothetical protein compare
CA264_09325 +0.4 1.5 methylglyoxal synthase compare
CA264_08640 +0.4 2.2 hypothetical protein compare
CA264_07260 +0.4 2.8 hypothetical protein compare
CA264_14785 +0.4 2.2 hypothetical protein compare
CA264_07185 +0.4 2.0 TetR family transcriptional regulator compare
CA264_04735 +0.4 3.4 hypothetical protein compare
CA264_08070 +0.4 2.5 gliding motility-associated ABC transporter substrate-binding protein GldG compare
CA264_16370 +0.4 2.6 gliding motility lipoprotein GldK compare
CA264_01800 +0.4 2.9 gluconate kinase compare
CA264_04585 +0.4 3.5 hypothetical protein compare
CA264_07155 +0.4 3.6 methylmalonyl-CoA mutase compare
CA264_09005 +0.4 1.8 hypothetical protein compare
CA264_15800 +0.4 2.7 hypothetical protein compare
CA264_04520 +0.4 2.1 DNA mismatch repair protein MutS compare
CA264_14345 +0.4 1.5 hypothetical protein compare
CA264_13690 +0.4 2.6 SAM-dependent methyltransferase compare
CA264_07270 +0.4 2.6 hypothetical protein compare
CA264_09330 +0.4 1.1 cold-shock protein compare
CA264_07205 +0.4 2.8 hypothetical protein compare
CA264_09190 +0.4 1.5 hypothetical protein compare
CA264_04120 +0.4 1.9 hypothetical protein compare
CA264_13505 +0.4 1.2 hypothetical protein compare
CA264_09630 +0.4 2.9 hypothetical protein compare
CA264_09790 +0.4 3.0 sensor histidine kinase compare
CA264_18005 +0.4 2.2 3-hydroxyanthranilate 3,4-dioxygenase compare
CA264_00905 +0.4 1.0 hypothetical protein compare
CA264_20495 +0.4 2.4 DNA polymerase/3'-5' exonuclease PolX compare
CA264_17240 +0.4 1.9 hypothetical protein compare
CA264_08080 +0.4 1.8 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
CA264_19740 +0.4 2.0 anti-sigma F factor antagonist compare
CA264_15510 +0.4 2.0 DUF4864 domain-containing protein compare
CA264_03610 +0.4 1.5 hypothetical protein compare
CA264_00855 +0.4 2.6 RNA helicase compare
CA264_11450 +0.4 2.9 serine/threonine protein phosphatase compare
CA264_11215 +0.4 1.7 N-acetyltransferase compare
CA264_21285 +0.4 1.0 hypothetical protein compare
CA264_05505 +0.4 2.8 hypothetical protein compare
CA264_14840 +0.4 3.5 hypothetical protein compare
CA264_13770 +0.4 1.0 DNA starvation/stationary phase protection protein compare
CA264_15885 +0.4 2.4 TetR family transcriptional regulator compare
CA264_16440 +0.4 0.9 hypothetical protein compare
CA264_02290 +0.4 2.2 hypothetical protein compare
CA264_03385 +0.4 1.6 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Spectinomycin dihydrochloride pentahydrate in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Spectinomycin dihydrochloride pentahydrate across organisms