Experiment set3IT020 for Agrobacterium fabrum C58

Compare to:

Beta-alanine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu1750 -5.6 -7.6 phosphoribosyl c-AMP cyclohydrolase compare
Atu0035 -5.5 -11.9 phosphoenolpyruvate carboxykinase compare
Atu3707 -5.4 -5.3 phosphoserine aminotransferase compare
Atu0679 -5.4 -9.0 ATP phosphoribosyltransferase compare
Atu0678 -5.2 -7.2 histidyl-tRNA synthetase compare
Atu2040 -5.2 -7.1 phosphoserine phosphatase compare
Atu3706 -5.1 -10.8 D-3-phosphoglycerate dehydrogenase compare
Atu1845 -5.0 -5.7 phosphoribosylformylglycinamidine synthase I compare
Atu3740 -4.8 -13.8 fructose bisphosphate aldolase compare
Atu2264 -4.8 -15.2 2-isopropylmalate synthase compare
Atu2650 -4.8 -15.0 glycerol-3-phosphate dehydrogenase compare
Atu1688 -4.8 -9.6 indole-3-glycerol-phosphate synthase compare
Atu2289 -4.7 -20.1 anthranilate synthase component I and II compare
Atu2791 -4.7 -10.8 3-isopropylmalate dehydrogenase compare
Atu0017 -4.7 -4.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0099 -4.6 -16.3 prephenate dehydratase compare
Atu1687 -4.6 -13.3 anthranilate phosphoribosyltransferase compare
Atu0537 -4.6 -8.2 histidinol dehydrogenase compare
Atu2790 -4.5 -3.8 3-isopropylmalate dehydratase, small subunit compare
Atu1446 -4.5 -4.2 two component response regulator compare
Atu2709 -4.5 -21.2 3-isopropylmalate dehydratase, large subunit compare
Atu4505 -4.3 -11.8 LacI family transcriptional regulator compare
Atu0041 -4.3 -4.1 glutamine amidotransferase compare
Atu3293 -4.1 -10.7 D-amino acid dehydrogenase small subunit conserved
Atu1620 -4.1 -14.1 triosephosphate isomerase compare
Atu1205 -4.1 -15.2 threonine dehydratase compare
Atu2036 -4.1 -17.6 acetolactate synthase III, large subunit compare
Atu1140 -4.1 -6.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0769 -4.1 -3.8 protoheme IX farnesyltransferase compare
Atu3469 -4.0 -3.9 phosphoglyceromutase compare
Atu1307 -4.0 -8.2 dihydroorotase compare
Atu0432 -3.9 -11.2 O-succinylhomoserine sulfhydrylase compare
Atu0298 -3.9 -9.2 orotidine 5 compare
Atu2747 -3.9 -18.1 hypothetical protein compare
Atu2115 -3.8 -13.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0038 -3.8 -5.3 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3754 -3.8 -8.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1075 -3.7 -9.9 amidophosphoribosyltransferase compare
Atu0647 -3.7 -8.8 phosphoribosylamine--glycine ligase compare
Atu1588 -3.7 -11.6 homoserine dehydrogenase compare
Atu0039 -3.7 -3.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu0400 -3.7 -7.0 orotate phosphoribosyltransferase compare
Atu0205 -3.6 -14.0 methylmalonate-semialdehyde dehydrogenase compare
Atu0399 -3.6 -7.8 dihydroorotase compare
Atu3328 -3.6 -7.7 aldehyde dehydrogenase compare
Atu0486 -3.6 -5.5 dihydroorotate dehydrogenase compare
Atu2718 -3.5 -12.2 homoserine O-succinyltransferase compare
Atu1141 -3.5 -10.0 Phosphoribosylglycinamide synthetase compare
Atu1850 -3.5 -5.6 phosphoribosylformylglycinamidine synthetase II compare
Atu0043 -3.5 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu1308 -3.5 -8.8 aspartate carbamoyl transferase catalytic subunit compare
Atu3291 -3.5 -8.4 Lpr family transcriptional regulator compare
Atu3739 -3.4 -4.5 phosphoglycerate kinase compare
Atu3885 -3.4 -10.1 inositol monophosphatase compare
Atu0346 -3.3 -6.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3329 -3.2 -13.3 beta alanine--pyruvate transaminase conserved
Atu3755 -3.1 -7.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0030 -3.0 -2.5 phosphocarrier protein HPr compare
Atu2015 -3.0 -14.5 aminotransferase compare
Atu1030 -3.0 -3.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1844 -2.9 -2.9 Phosphoribosylformylglycinamidine synthetase compare
Atu0207 -2.9 -15.8 transcriptional regulator, LysR family compare
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0332 -2.8 -11.1 RNA polymerase sigma-54 factor compare
Atu3292 -2.8 -14.0 alanine racemase compare
Atu1359 -2.8 -2.0 dnaK deletion suppressor protein compare
Atu3783 -2.6 -15.5 glutamate synthase subunit beta compare
Atu1686 -2.5 -15.2 peptidyl-prolyl cis-trans isomerse D compare
Atu1445 -2.4 -7.5 two component sensor kinase compare
Atu3784 -2.4 -18.3 glutamate synthase large subunit compare
Atu3763 -2.3 -2.6 hypothetical protein compare
Atu6114 -2.2 -2.5 hypothetical protein compare
Atu4096 -2.2 -10.7 nicotinate-nucleotide pyrophosphorylase compare
Atu1456 -2.0 -11.9 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3482 -2.0 -11.7 pantoate--beta-alanine ligase compare
Atu4098 -1.9 -11.0 quinolinate synthetase compare
Atu0723 -1.9 -2.7 FAD dependent oxidoreductase compare
Atu4711 -1.8 -7.1 two component sensor kinase compare
Atu1748 -1.8 -8.0 NIFU-like protein compare
Atu2155 -1.8 -14.2 methionine synthase compare
Atu1577 -1.7 -6.7 ABC transporter, substrate binding protein (amino acid) compare
Atu1579 -1.6 -8.8 ABC transporter, membrane spanning protein (amino acid) compare
Atu1580 -1.6 -8.5 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu2548 -1.6 -11.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu3483 -1.6 -6.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu4097 -1.6 -9.1 L-aspartate oxidase compare
Atu1454 -1.6 -5.5 siroheme synthase compare
Atu1464 -1.6 -6.6 glycine cleavage system T protein, aminomethyltransferase compare
Atu6098 -1.6 -0.9 transcriptional regulator, HTH family compare
Atu1589 -1.6 -4.6 aminotransferase, class I compare
Atu3289 -1.5 -3.3 thiamine-phosphate pyrophosphorylase compare
Atu4173 -1.5 -3.5 phosphoenolpyruvate-protein phosphotransferase compare
Atu1457 -1.4 -2.2 hypothetical protein compare
Atu1455 -1.4 -2.5 hypothetical protein compare
Atu3298 -1.4 -9.3 C4-dicarboxylate transporter DctA compare
Atu3468 -1.4 -1.3 hypothetical protein compare
Atu0141 -1.4 -1.9 cytochrome O ubiquinol oxidase subunit I compare
Atu1463 -1.3 -7.4 glycine cleavage system component H compare
Atu3288 -1.3 -7.4 hydroxyethylthiazole kinase compare
Atu1462 -1.3 -8.5 glycine cleavage system protein P2 compare
Atu0026 -1.3 -1.4 hypothetical protein compare
Atu0189 -1.3 -3.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1578 -1.3 -7.3 ABC transporter, membrane spanning protein (amino acid) compare
Atu2376 -1.3 -1.4 hypothetical protein compare
Atu2569 -1.2 -8.7 thiamine biosynthesis protein compare
Atu2207 -1.2 -2.1 two component sensor kinase compare
Atu3297 -1.2 -8.6 two component sensor kinase for C4-dicarboxylate transport compare
Atu3290 -1.2 -7.0 phosphomethylpyrimidine kinase compare
Atu2163 -1.1 -1.8 hypothetical protein compare
Atu3908 -1.1 -8.7 GntR family transcriptional regulator compare
Atu1028 -1.1 -2.6 hypothetical protein compare
Atu0086 -1.1 -1.4 ribosome-binding factor A compare
Atu3731 -1.1 -6.3 5-formyltetrahydrofolate cyclo-ligase compare
Atu2640 -1.1 -3.8 hypothetical protein compare
Atu3912 -1.1 -6.0 hypothetical protein compare
Atu0837 -1.0 -3.9 transcriptional regulator, MarR family compare
Atu8115 -1.0 -3.3 Hypothetical Protein compare
Atu4773 -1.0 -2.0 two component response regulator compare
Atu0190 -1.0 -6.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0641 -1.0 -3.3 hypothetical protein compare
Atu0361 -1.0 -2.6 transcriptional regulator compare
Atu3296 -1.0 -6.6 two component response regulator for C4-dicarboxylate transport compare
Atu3120 -1.0 -1.7 hypothetical protein compare
Atu5160 -1.0 -2.4 transcriptional regulator protein compare
Atu2425 -0.9 -6.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu0803 -0.9 -7.2 pyruvate,orthophosphate dikinase compare
Atu0536 -0.9 -4.3 hypothetical protein compare
Atu0029 -0.9 -4.5 S-adenosylhomocysteine hydrolase compare
Atu1774 -0.9 -5.5 ABC transporter, substrate binding protein (peptide) compare
Atu0422 -0.9 -2.1 ABC transporter, membrane spanning protein compare
Atu0421 -0.9 -1.4 ABC transporter, membrane spanning protein compare
Atu0031 -0.9 -1.3 PTS system, IIA component compare
Atu8162 -0.9 -1.5 hypothetical protein compare
Atu0894 -0.8 -1.8 ABC transporter, membrane spanning protein compare
Atu0876 -0.8 -1.9 superoxide dismutase compare
Atu4217 -0.8 -1.5 TetR family transcriptional regulator compare
Atu0977 -0.8 -2.6 serine protease DO-like protease compare
Atu3910 -0.8 -4.5 LamB/YcsF family protein compare
Atu3561 -0.8 -1.1 hypothetical protein compare
Atu5010 -0.8 -1.8 hypothetical protein compare
Atu4166 -0.8 -2.3 UDP-glucose 4-epimerase compare
Atu1163 -0.8 -1.4 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2831 -0.8 -2.9 glucose inhibited division protein A compare
Atu3663 -0.8 -1.3 hypothetical protein compare
Atu1219 -0.8 -1.0 hypothetical protein compare
Atu2796 -0.7 -3.7 precorrin-4 C11-methyltransferase compare
Atu3121 -0.7 -1.1 cold shock protein compare
Atu2057 -0.7 -2.0 DNA helicase II compare
Atu8088 -0.7 -1.1 hypothetical protein compare
Atu4317 -0.7 -2.8 TetR family transcriptional regulator compare
Atu6153 -0.7 -2.1 conserved hypothetical protein compare
Atu3012 -0.7 -1.0 hypothetical protein compare
Atu2426 -0.7 -5.1 ABC transporter, membrane spanning protein (branched chain amino acid) compare
Atu2424 -0.7 -3.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu2824 -0.7 -2.6 hypothetical protein compare
Atu2427 -0.7 -4.7 ABC transporter, membrane spanning protein compare
Atu3913 -0.7 -4.6 biotin carboxylase compare
Atu3183 -0.7 -0.8 hypothetical protein compare
Atu1364 -0.7 -3.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4477 -0.7 -3.9 TetR family transcriptional regulator compare
Atu4702 -0.7 -2.7 GntR family transcriptional regulator compare
Atu2758 -0.7 -4.2 ammonium transporter compare
Atu2439 -0.7 -1.0 hypothetical protein compare
Atu5470 -0.6 -1.1 hypothetical protein compare
Atu5145 -0.6 -1.5 acetyltransferase compare
Atu2067 -0.6 -0.7 hypothetical protein compare
Atu1685 -0.6 -0.8 hypothetical protein compare
Atu0971 -0.6 -2.1 two component sensor kinase compare
Atu3668 -0.6 -2.4 siderophore biosynthesis protein compare
Atu3036 -0.6 -2.6 dipeptide ABC transporter permease compare
Atu8056 -0.6 -0.9 hypothetical protein compare
Atu1653 -0.6 -2.6 hypothetical protein compare
Atu4176 -0.6 -2.7 hypothetical protein compare
Atu0533 -0.6 -1.6 putative inhibitor of septum formation compare
Atu5125 -0.6 -1.6 GntR family transcriptional regulator compare
Atu1232 -0.5 -1.1 hypothetical protein compare
Atu3492 -0.5 -2.4 sugar kinase compare
Atu0861 -0.5 -1.5 hypothetical protein compare
Atu2123 -0.5 -1.6 methylenetetrahydrofolate reductase compare
Atu2416 -0.5 -3.7 glutamine synthetase compare
Atu1689 -0.5 -2.1 molybdenum cofactor biosynthesis protein C compare
Atu0893 -0.5 -2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu1573 -0.5 -0.9 hypothetical protein compare
Atu4686 -0.5 -1.4 hypothetical protein compare
Atu2804 -0.5 -3.6 cobaltochelatase subunit compare
Atu1439 -0.5 -1.2 hypothetical protein compare
Atu8096 -0.5 -1.2 hypothetical protein compare
Atu2205 -0.5 -2.3 transcriptional regulator, MarR family compare
Atu1779 -0.5 -1.3 hypothetical protein compare
Atu2772 -0.5 -2.8 Invasion protein A compare
Atu2808 -0.5 -2.5 cobyric acid synthase compare
Atu0795 -0.5 -1.4 hypothetical protein compare
Atu2077 -0.5 -1.2 DNA polymerase III, epsilon subunit compare
Atu1149 -0.5 -0.9 adenylate cyclase compare
Atu0703 -0.5 -1.7 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu1634 -0.5 -1.2 hypothetical protein compare
Atu4873 -0.5 -3.3 TetR family transcriptional regulator compare
Atu0836 -0.5 -1.6 Glutathione-S-transferase compare
Atu0636 -0.5 -3.0 hypothetical protein compare
Atu1770 -0.5 -2.9 glutamine synthetase compare


Specific Phenotypes

For 12 genes in this experiment

For nitrogen source Beta-alanine in Agrobacterium fabrum C58

For nitrogen source Beta-alanine across organisms