Experiment set3IT019 for Agrobacterium fabrum C58

Compare to:

Glycine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu0972 -6.3 -7.4 lipA protein compare
Atu2710 -6.1 -4.2 hypothetical protein compare
Atu1687 -6.1 -10.8 anthranilate phosphoribosyltransferase compare
Atu0679 -5.9 -8.0 ATP phosphoribosyltransferase compare
Atu0017 -5.8 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0038 -5.5 -7.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2289 -5.4 -18.9 anthranilate synthase component I and II compare
Atu0035 -5.4 -14.2 phosphoenolpyruvate carboxykinase compare
Atu1463 -5.2 -7.7 glycine cleavage system component H compare
Atu0537 -5.1 -6.9 histidinol dehydrogenase compare
Atu1446 -5.0 -4.8 two component response regulator compare
Atu3469 -4.9 -3.4 phosphoglyceromutase compare
Atu1205 -4.8 -16.6 threonine dehydratase compare
Atu2036 -4.8 -18.8 acetolactate synthase III, large subunit compare
Atu1688 -4.8 -10.1 indole-3-glycerol-phosphate synthase compare
Atu2718 -4.6 -10.3 homoserine O-succinyltransferase compare
Atu0043 -4.6 -4.4 imidazoleglycerol-phosphate dehydratase compare
Atu0432 -4.6 -11.0 O-succinylhomoserine sulfhydrylase compare
Atu1750 -4.6 -6.4 phosphoribosyl c-AMP cyclohydrolase compare
Atu1464 -4.5 -8.1 glycine cleavage system T protein, aminomethyltransferase compare
Atu2790 -4.5 -3.8 3-isopropylmalate dehydratase, small subunit compare
Atu1462 -4.5 -17.3 glycine cleavage system protein P2 compare
Atu0099 -4.4 -15.3 prephenate dehydratase compare
Atu2264 -4.4 -14.5 2-isopropylmalate synthase compare
Atu3739 -4.3 -4.5 phosphoglycerate kinase compare
Atu2791 -4.3 -11.3 3-isopropylmalate dehydrogenase compare
Atu2650 -4.1 -17.1 glycerol-3-phosphate dehydrogenase compare
Atu0678 -4.0 -8.8 histidyl-tRNA synthetase compare
Atu2709 -4.0 -21.1 3-isopropylmalate dehydratase, large subunit compare
Atu3885 -3.9 -12.0 inositol monophosphatase compare
Atu1307 -3.9 -7.5 dihydroorotase compare
Atu3740 -3.8 -11.7 fructose bisphosphate aldolase compare
Atu0399 -3.8 -10.1 dihydroorotase compare
Atu0400 -3.7 -7.1 orotate phosphoribosyltransferase compare
Atu1308 -3.7 -9.1 aspartate carbamoyl transferase catalytic subunit compare
Atu0298 -3.6 -7.8 orotidine 5 compare
Atu1620 -3.6 -13.7 triosephosphate isomerase compare
Atu1141 -3.5 -8.0 Phosphoribosylglycinamide synthetase compare
Atu4505 -3.5 -10.2 LacI family transcriptional regulator compare
Atu2747 -3.3 -17.9 hypothetical protein compare
Atu0029 -3.3 -8.9 S-adenosylhomocysteine hydrolase compare
Atu1588 -3.3 -11.7 homoserine dehydrogenase compare
Atu3754 -3.2 -8.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0039 -3.2 -3.7 imidazoleglycerol-phosphate synthase cyclase compare
Atu0486 -3.1 -4.8 dihydroorotate dehydrogenase compare
Atu1030 -3.1 -2.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2015 -3.0 -14.5 aminotransferase compare
Atu0647 -3.0 -10.2 phosphoribosylamine--glycine ligase compare
Atu1140 -2.9 -5.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0040 -2.9 -1.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2115 -2.9 -13.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1844 -2.8 -5.3 Phosphoribosylformylglycinamidine synthetase compare
Atu3731 -2.8 -12.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu1075 -2.7 -6.5 amidophosphoribosyltransferase compare
Atu1845 -2.7 -4.8 phosphoribosylformylglycinamidine synthase I compare
Atu1686 -2.6 -15.9 peptidyl-prolyl cis-trans isomerse D compare
Atu1445 -2.5 -7.4 two component sensor kinase compare
Atu0332 -2.5 -9.3 RNA polymerase sigma-54 factor compare
Atu2155 -2.5 -15.7 methionine synthase compare
Atu0030 -2.4 -2.5 phosphocarrier protein HPr compare
Atu0346 -2.4 -3.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu6098 -2.4 -1.4 transcriptional regulator, HTH family compare
Atu4217 -2.4 -3.1 TetR family transcriptional regulator compare
Atu2798 -2.3 -5.6 precorrin-6y methyltransferase compare
Atu1589 -2.3 -6.7 aminotransferase, class I compare
Atu3755 -2.2 -6.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1685 -2.2 -1.8 hypothetical protein compare
Atu5540 -2.2 -1.6 hypothetical protein compare
Atu3783 -2.1 -13.3 glutamate synthase subunit beta compare
Atu2793 -2.1 -8.1 cobyrinic acid a,c-diamide synthase compare
Atu1850 -2.1 -3.0 phosphoribosylformylglycinamidine synthetase II compare
Atu1354 -2.1 -2.2 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu3784 -2.0 -15.8 glutamate synthase large subunit compare
Atu2800 -1.9 -5.1 precorrin-3B C17-methyltransferase compare
Atu1759 -1.9 -10.8 L-serine dehydratase conserved
Atu2799 -1.9 -4.7 precorrin-6x reductase compare
Atu2809 -1.8 -7.3 cobalamin biosynthesis protein compare
Atu4773 -1.8 -2.9 two component response regulator compare
Atu0041 -1.7 -1.4 glutamine amidotransferase compare
Atu4019 -1.7 -9.7 two component response regulator compare
Atu2804 -1.7 -9.2 cobaltochelatase subunit compare
Atu1456 -1.6 -9.3 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2807 -1.6 -8.8 cob(I)alamin adenosyltransferase compare
Atu2796 -1.6 -7.3 precorrin-4 C11-methyltransferase compare
Atu0876 -1.6 -2.0 superoxide dismutase compare
Atu2802 -1.6 -9.0 precorrin-8X methylmutase compare
Atu1577 -1.6 -5.7 ABC transporter, substrate binding protein (amino acid) compare
Atu2207 -1.6 -2.3 two component sensor kinase compare
Atu4018 -1.6 -8.0 two component sensor kinase compare
Atu4173 -1.5 -3.4 phosphoenolpyruvate-protein phosphotransferase compare
Atu2808 -1.5 -9.5 cobyric acid synthase compare
Atu2795 -1.5 -6.2 cobalamin biosynthetic protein compare
Atu1454 -1.4 -8.3 siroheme synthase compare
Atu1163 -1.4 -2.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1542 -1.4 -5.9 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3707 -1.4 -3.1 phosphoserine aminotransferase compare
Atu0687 -1.4 -3.0 hypothetical protein compare
Atu4166 -1.4 -3.0 UDP-glucose 4-epimerase compare
Atu2439 -1.4 -2.2 hypothetical protein compare
Atu4711 -1.4 -4.8 two component sensor kinase compare
Atu2548 -1.4 -9.3 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2801 -1.3 -3.5 precorrin-2 C20 methyltransferase compare
Atu1457 -1.3 -3.0 hypothetical protein compare
Atu2803 -1.3 -3.6 Cobalamin biosynthesis associated protein compare
Atu1579 -1.3 -9.3 ABC transporter, membrane spanning protein (amino acid) compare
Atu2416 -1.2 -9.1 glutamine synthetase compare
Atu0026 -1.2 -1.4 hypothetical protein compare
Atu0925 -1.2 -2.7 hypothetical protein compare
Atu0322 -1.2 -4.6 enoyl CoA hydratase compare
Atu0188 -1.1 -3.7 ABC transporter, membrane spanning protein (peptide) compare
Atu3298 -1.1 -6.8 C4-dicarboxylate transporter DctA compare
Atu3296 -1.1 -6.4 two component response regulator for C4-dicarboxylate transport compare
Atu1580 -1.0 -6.8 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu0641 -1.0 -3.4 hypothetical protein compare
Atu3732 -1.0 -5.2 hemolysin compare
Atu0941 -1.0 -1.1 hypothetical protein compare
Atu8115 -1.0 -4.0 Hypothetical Protein compare
Atu1455 -1.0 -4.3 hypothetical protein compare
Atu2215 -1.0 -5.1 hypothetical protein compare
Atu3297 -1.0 -6.6 two component sensor kinase for C4-dicarboxylate transport compare
Atu2805 -1.0 -4.2 cobalamin synthesis protein compare
Atu1572 -1.0 -5.5 hydrolase compare
Atu0769 -1.0 -2.0 protoheme IX farnesyltransferase compare
Atu1774 -1.0 -4.7 ABC transporter, substrate binding protein (peptide) compare
Atu0107 -1.0 -2.6 hypothetical protein compare
Atu0190 -0.9 -5.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4609 -0.9 -6.7 glycosyltransferase compare
Atu0977 -0.9 -3.5 serine protease DO-like protease compare
Atu3496 -0.9 -2.3 hypothetical protein compare
Atu3763 -0.9 -1.5 hypothetical protein compare
Atu6114 -0.9 -1.5 hypothetical protein compare
Atu1028 -0.9 -2.3 hypothetical protein compare
Atu8167 -0.9 -6.6 putative transmembrane protein compare
Atu0189 -0.9 -2.2 ABC transporter, membrane spanning protein (peptide) compare
Atu1373 -0.9 -5.4 hypothetical protein compare
Atu0723 -0.9 -1.8 FAD dependent oxidoreductase compare
Atu3759 -0.9 -1.6 hypothetical protein compare
Atu0079 -0.8 -4.5 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu2797 -0.8 -2.4 cobalamin biosynthesis protein compare
Atu1359 -0.8 -1.1 dnaK deletion suppressor protein compare
Atu0291 -0.8 -5.1 hypothetical protein compare
Atu3031 -0.8 -1.3 hypothetical protein compare
Atu4616 -0.8 -1.3 dTDP-4-dehydrorhamnose reductase compare
Atu0931 -0.8 -6.4 penicillin binding protein compare
Atu1578 -0.8 -3.7 ABC transporter, membrane spanning protein (amino acid) compare
Atu4608 -0.8 -6.5 hypothetical protein compare
Atu2131 -0.8 -4.4 hypothetical protein compare
Atu4884 -0.8 -2.4 hypothetical protein compare
Atu1891 -0.8 -2.6 cobalamin biosynthesis protein compare
Atu0361 -0.7 -1.7 transcriptional regulator compare
Atu3353 -0.7 -5.0 mannose-1-phosphate guanylyltransferase compare
Atu4306 -0.7 -2.6 two component response regulator compare
Atu0525 -0.7 -2.8 transcriptional regulator, LuxR family compare
Atu0422 -0.7 -1.6 ABC transporter, membrane spanning protein compare
Atu2758 -0.7 -5.0 ammonium transporter compare
Atu1754 -0.7 -1.0 hypothetical protein compare
Atu2376 -0.7 -0.5 hypothetical protein compare
Atu4618 -0.7 -5.0 dTDP-rhamnose-3,5-epimerase compare
Atu3345 -0.7 -2.3 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu4610 -0.7 -4.7 sugar nucleotide epimerase/dehydratase compare
Atu3429 -0.6 -1.2 hypothetical protein compare
Atu4050 -0.6 -1.6 UTP-glucose-1-phosphate uridylyltransferase compare
Atu3482 -0.6 -3.7 pantoate--beta-alanine ligase compare
Atu0141 -0.6 -0.7 cytochrome O ubiquinol oxidase subunit I compare
Atu4617 -0.6 -3.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2464 -0.6 -1.5 formyltetrahydrofolate deformylase compare
Atu1810 -0.6 -1.1 hypothetical protein compare
Atu4346 -0.6 -2.5 hypothetical protein compare
Atu0627 -0.6 -2.8 carboxymethylenebutenolidase compare
Atu2183 -0.6 -3.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0702 -0.6 -1.5 calcium-binding protein, regucalcin compare
Atu2344 -0.6 -1.2 lactoylglutathione lyase compare
Atu1573 -0.6 -1.3 hypothetical protein compare
Atu3628 -0.6 -3.5 hypothetical protein compare
Atu3012 -0.6 -1.3 hypothetical protein compare
Atu3311 -0.6 -4.5 phosphomannose isomerase compare
Atu4477 -0.6 -2.7 TetR family transcriptional regulator compare
Atu1804 -0.5 -2.9 hypothetical protein compare
Atu2722 -0.5 -3.1 porin compare
Atu8159 -0.5 -1.5 hypothetical protein compare
Atu3122 -0.5 -1.5 cold shock protein compare
Atu3289 -0.5 -1.7 thiamine-phosphate pyrophosphorylase compare
Atu0631 -0.5 -2.8 molybdenum cofactor biosynthesis protein B compare
Atu2633 -0.5 -0.8 RhtB family transporter compare
Atu2810 -0.5 -3.3 cobalamin biosynthetic protein compare
Atu0565 -0.5 -1.9 hypothetical protein compare
Atu4882 -0.5 -1.1 hypothetical protein compare
Atu3032 -0.5 -2.5 hypothetical protein compare
Atu1904 -0.5 -0.8 transcriptional regulator compare
Atu4866 -0.5 -3.8 hypothetical protein compare
Atu4870 -0.5 -3.4 NADP-dependent quinone oxidoreductase compare
Atu3011 -0.5 -1.4 ArsR family transcriptional regulator compare
Atu0837 -0.5 -2.5 transcriptional regulator, MarR family compare
Atu4161 -0.5 -1.3 hypothetical protein compare
Atu4614 -0.5 -3.0 glycosyltransferase compare
Atu0777 -0.5 -0.6 hypothetical protein compare
Atu4290 -0.5 -1.3 hypothetical protein compare
Atu3121 -0.5 -1.0 cold shock protein compare
Atu3015 -0.5 -2.0 hypothetical protein compare
Atu2640 -0.5 -1.8 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source Glycine in Agrobacterium fabrum C58

For nitrogen source Glycine across organisms