Experiment set3IT018 for Pseudomonas simiae WCS417

Compare to:

Inosine carbon source

200 most important genes:

  gene name fitness t score description  
PS417_01855 -7.6 -4.8 phosphoribosyl-AMP cyclohydrolase compare
PS417_01575 -7.4 -6.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_04415 -6.5 -11.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_18560 -6.2 -10.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_23805 -6.2 -7.4 acetolactate synthase 3 regulatory subunit compare
PS417_23545 -6.1 -4.2 gamma-glutamyl kinase compare
PS417_02005 -6.0 -14.5 glutamate synthase compare
PS417_26740 -5.9 -10.3 homoserine acetyltransferase compare
PS417_23800 -5.8 -13.0 ketol-acid reductoisomerase compare
PS417_04420 -5.7 -14.2 histidinol dehydrogenase compare
PS417_18585 -5.7 -8.6 3-isopropylmalate dehydrogenase compare
PS417_25725 -5.6 -16.6 anthranilate synthase component I compare
PS417_01850 -5.6 -10.8 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_12855 -5.6 -5.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_27040 -5.5 -5.0 3-phosphoglycerate dehydrogenase compare
PS417_26745 -5.5 -7.2 methionine biosynthesis protein MetW compare
PS417_08125 -5.5 -2.2 prephenate dehydratase compare
PS417_00185 -5.4 -5.2 tryptophan synthase subunit beta compare
PS417_25720 -5.2 -9.2 anthranilate synthase component II compare
PS417_27795 -5.1 -2.0 orotate phosphoribosyltransferase compare
PS417_18600 -5.1 -5.6 isopropylmalate isomerase compare
PS417_24745 -4.9 -4.9 gamma-glutamyl phosphate reductase compare
PS417_16465 -4.8 -12.7 sirohydrochlorin ferrochelatase compare
PS417_23995 -4.8 -1.9 preprotein translocase subunit SecG compare
PS417_18595 -4.8 -4.4 3-isopropylmalate dehydratase compare
PS417_02510 -4.7 -2.6 ATP phosphoribosyltransferase regulatory subunit compare
PS417_01565 -4.7 -8.2 imidazole glycerol phosphate synthase compare
PS417_02000 -4.6 -17.0 glutamate synthase compare
PS417_25715 -4.6 -6.3 anthranilate phosphoribosyltransferase compare
PS417_18530 -4.5 -5.1 O-succinylhomoserine sulfhydrylase compare
PS417_23110 -4.2 -9.5 2-isopropylmalate synthase compare
PS417_23810 -4.2 -10.5 acetolactate synthase 3 catalytic subunit compare
PS417_27195 -4.2 -2.3 N-acetylglutamate synthase compare
PS417_19420 -4.2 -5.0 OHCU decarboxylase conserved
PS417_25710 -4.2 -2.3 indole-3-glycerol-phosphate synthase compare
PS417_12290 -4.0 -8.4 sulfite reductase compare
PS417_05595 -3.9 -7.1 ornithine carbamoyltransferase compare
PS417_02415 -3.7 -5.9 phosphoserine phosphatase compare
PS417_26730 -3.7 -2.0 pyrroline-5-carboxylate reductase compare
PS417_26995 -3.6 -11.4 phosphoserine phosphatase compare
PS417_22690 -3.6 -7.9 phosphogluconate dehydratase compare
PS417_01580 -3.6 -2.7 imidazole glycerol phosphate synthase compare
PS417_18400 -3.6 -6.2 D-ribose ABC transporter, ATPase component RbsA (from data) compare
PS417_08805 -3.5 -9.7 hydroxypyruvate isomerase conserved
PS417_19425 -3.5 -1.9 allantoicase compare
PS417_19415 -3.5 -2.0 allantoinase compare
PS417_26890 -3.2 -5.3 dihydroxy-acid dehydratase compare
PS417_18395 -3.2 -3.5 D-ribose ABC transporter, permease component RbsC (from data) compare
PS417_23900 -3.1 -10.5 poly(A) polymerase compare
PS417_21395 -3.1 -10.5 radical SAM protein compare
PS417_01710 -3.0 -6.6 histidine utilization repressor compare
PS417_04875 -2.8 -3.1 molybdenum cofactor biosynthesis protein MoaE compare
PS417_08810 -2.8 -11.2 glyoxylate carboligase (EC 4.1.1.47) (from data) conserved
PS417_23770 -2.8 -4.4 exodeoxyribonuclease V subunit alpha compare
PS417_14940 -2.7 -4.0 LysR family transcriptional regulator compare
PS417_04865 -2.7 -4.7 molybdenum cofactor biosynthesis protein MoaC compare
PS417_00180 -2.6 -3.5 tryptophan synthase subunit alpha compare
PS417_08670 -2.6 -6.7 molybdopterin biosynthesis protein B compare
PS417_06375 -2.6 -2.0 deoxycytidine triphosphate deaminase compare
PS417_08675 -2.5 -6.8 molybdenum cofactor biosynthesis protein MoaA compare
PS417_11845 -2.5 -5.3 RpiR family transcriptional regulator compare
PS417_20160 -2.4 -2.9 cysteine synthase compare
PS417_20985 -2.4 -4.5 porin compare
PS417_03925 -2.4 -12.3 nicotinate-nucleotide pyrophosphorylase compare
PS417_20895 -2.4 -15.7 molybdenum cofactor sulfurylase conserved
PS417_19430 -2.3 -5.7 ureidoglycolate hydrolase conserved
PS417_24155 -2.3 -3.9 ATP-binding protein compare
PS417_01570 -2.3 -1.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_20885 -2.3 -7.4 Xanthine dehydrogenase (EC 1.17.1.4) (from data) conserved
PS417_01605 -2.3 -2.8 phosphoglycerate mutase compare
PS417_22565 -2.3 -2.4 formyltetrahydrofolate deformylase compare
PS417_22570 -2.2 -2.0 H-NS histone compare
PS417_22385 -2.2 -9.9 quinolinate synthase A compare
PS417_20890 -2.1 -13.4 Xanthine dehydrogenase (EC 1.17.1.4) (from data) conserved
PS417_27010 -2.1 -11.0 threonine dehydratase compare
PS417_26985 -2.1 -5.2 phosphoenolpyruvate-protein phosphotransferase compare
PS417_06200 -2.1 -6.1 protein-PII uridylyltransferase compare
PS417_27835 -2.1 -11.2 endoribonuclease compare
PS417_09725 -2.1 -10.2 transporter compare
PS417_19435 -2.0 -6.5 urate hydroxylase (1.7.3.3) (from data) conserved
PS417_21705 -1.9 -7.5 arginine N-succinyltransferase compare
PS417_19395 -1.9 -9.0 guanine permease conserved
PS417_18390 -1.9 -6.7 LacI family transcriptional regulator compare
PS417_01560 -1.8 -2.1 imidazoleglycerol-phosphate dehydratase compare
PS417_04180 -1.7 -3.2 GntR family transcriptional regulator compare
PS417_16990 -1.7 -7.2 acyl-CoA dehydrogenase compare
PS417_21125 -1.6 -5.4 phosphoadenosine phosphosulfate reductase compare
PS417_06710 -1.5 -2.1 beta-ketoadipyl CoA thiolase compare
PS417_02555 -1.5 -10.5 exoribonuclease R compare
PS417_06680 -1.5 -9.3 nuclease PIN compare
PS417_08580 -1.4 -6.6 histidine kinase compare
PS417_13510 -1.4 -1.9 polyketide cyclase compare
PS417_21750 -1.4 -11.2 acetyl-CoA synthetase compare
PS417_22520 -1.4 -3.9 histidine kinase compare
PS417_17565 -1.4 -4.0 branched-chain amino acid aminotransferase compare
PS417_20340 -1.4 -1.3 hypothetical protein compare
PS417_10995 -1.4 -3.1 GntR family transcriptional regulator compare
PS417_08155 -1.3 -2.6 integration host factor subunit beta compare
PS417_09210 -1.3 -2.0 TetR family transcriptional regulator compare
PS417_21320 -1.3 -6.1 transcriptional regulator compare
PS417_26175 -1.3 -1.4 sarcosine oxidase subunit gamma compare
PS417_27875 -1.3 -6.2 histidine kinase compare
PS417_28220 -1.3 -3.1 LysR family transcriptional regulator compare
PS417_12310 -1.2 -7.9 methionine synthase compare
PS417_24835 -1.2 -3.6 hypothetical protein compare
PS417_10245 -1.2 -1.8 hypothetical protein compare
PS417_08200 -1.2 -4.1 hypothetical protein compare
PS417_17515 -1.1 -6.0 GfdT protein compare
PS417_08205 -1.1 -4.0 acetyltransferase compare
PS417_07115 -1.1 -7.3 L-aspartate oxidase compare
PS417_27035 -1.1 -4.2 FAD-linked oxidase compare
PS417_18690 -1.1 -2.6 aromatic amino acid aminotransferase compare
PS417_01590 -1.1 -2.3 polysaccharide deacetylase compare
PS417_20665 -1.1 -6.1 hypothetical protein compare
PS417_24585 -1.1 -7.4 AMP nucleosidase compare
PS417_09715 -1.1 -3.1 hypothetical protein compare
PS417_06685 -1.1 -1.4 beta-ketoadipyl CoA thiolase compare
PS417_21655 -1.1 -1.8 aspartate kinase compare
PS417_08045 -1.0 -2.4 uracil permease compare
PS417_21035 -1.0 -6.5 multidrug transporter compare
PS417_08225 -1.0 -4.4 acetolactate synthase compare
PS417_12075 -1.0 -5.6 DNA-binding protein compare
PS417_23950 -1.0 -2.6 polynucleotide phosphorylase/polyadenylase compare
PS417_23380 -0.9 -2.8 cytochrome o ubiquinol oxidase subunit III compare
PS417_06500 -0.9 -2.0 hypothetical protein compare
PS417_20025 -0.9 -2.0 alpha-ribazole phosphatase compare
PS417_21630 -0.9 -2.1 magnesium transporter compare
PS417_22445 -0.9 -3.7 ATP-dependent DNA helicase RuvB compare
PS417_09695 -0.9 -1.2 hydrolase compare
PS417_06205 -0.9 -5.9 methionine aminopeptidase compare
PS417_08135 -0.9 -4.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_20855 -0.9 -1.8 hypothetical protein compare
PS417_08380 -0.9 -5.4 ABC transporter ATP-binding protein compare
PS417_17705 -0.9 -2.1 LacI family transcriptional regulator compare
PS417_18590 -0.9 -1.9 SAM-dependent methyltransferase compare
PS417_28230 -0.8 -1.9 transcriptional regulator compare
PS417_25030 -0.8 -2.5 hypothetical protein compare
PS417_01635 -0.8 -5.9 nitrogen regulation protein NR(I) compare
PS417_08685 -0.8 -1.8 flagellar hook-length control protein FliK compare
PS417_08195 -0.8 -5.2 hypothetical protein compare
PS417_22060 -0.8 -1.5 hypothetical protein compare
PS417_26005 -0.8 -5.0 biotin synthase compare
PS417_08220 -0.8 -0.9 epimerase compare
PS417_17240 -0.8 -3.5 trigger factor compare
PS417_01640 -0.8 -3.3 histidine kinase compare
PS417_05540 -0.8 -3.5 histidine kinase compare
PS417_26295 -0.8 -2.6 gamma-butyrobetaine dioxygenase compare
PS417_03260 -0.8 -2.2 5S ribosomal RNA compare
PS417_01290 -0.8 -0.7 ADP-ribose diphosphatase compare
PS417_17015 -0.8 -2.9 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) compare
PS417_08025 -0.8 -1.4 acetylornithine aminotransferase compare
PS417_19400 -0.8 -2.4 amino acid transporter LysE compare
PS417_07560 -0.8 -1.5 universal stress protein UspA compare
PS417_21700 -0.8 -3.2 arginine N-succinyltransferase compare
PS417_04270 -0.8 -5.1 ribonuclease G compare
PS417_12840 -0.8 -3.2 TetR family transcriptional regulator compare
PS417_26040 -0.7 -2.2 malate synthase compare
PS417_09705 -0.7 -1.6 hypothetical protein compare
PS417_23375 -0.7 -1.3 cytochrome C oxidase compare
PS417_04410 -0.7 -0.9 hypothetical protein compare
PS417_02805 -0.7 -1.7 urease subunit gamma compare
PS417_02710 -0.7 -2.8 Urease maturation and nickel insertion protein UreE (from data) compare
PS417_02895 -0.7 -2.0 precorrin-6Y C5,15-methyltransferase compare
PS417_13055 -0.7 -0.7 aminotransferase compare
PS417_17510 -0.7 -4.3 histidine kinase compare
PS417_22620 -0.7 -1.8 pyruvate kinase compare
PS417_08430 -0.7 -2.4 phospho-2-dehydro-3-deoxyheptonate aldolase compare
PS417_23475 -0.7 -1.4 hypothetical protein compare
PS417_27490 -0.7 -1.6 hypothetical protein compare
PS417_08230 -0.7 -1.2 lipopolysaccharide biosynthesis protein RfbH compare
PS417_05165 -0.7 -1.5 cytosol aminopeptidase compare
PS417_08410 -0.7 -2.3 hypothetical protein compare
PS417_17945 -0.7 -1.1 hypothetical protein compare
PS417_20620 -0.7 -3.6 glycosyl transferase family 2 compare
PS417_03045 -0.7 -1.1 hypothetical protein compare
PS417_00485 -0.7 -2.6 ABC transporter permease compare
PS417_24370 -0.7 -0.7 (2Fe-2S)-binding protein compare
PS417_17485 -0.7 -3.7 membrane protein compare
PS417_00295 -0.7 -3.2 hypothetical protein compare
PS417_08990 -0.7 -1.7 ABC transporter substrate-binding protein compare
PS417_19675 -0.7 -3.1 chemotaxis protein CheY compare
PS417_18060 -0.7 -1.8 general secretion pathway protein GspJ compare
PS417_27675 -0.7 -2.5 xanthine phosphoribosyltransferase compare
PS417_08945 -0.6 -4.1 heat shock protein 90 compare
PS417_11485 -0.6 -1.5 AraC family transcriptional regulator compare
PS417_00455 -0.6 -1.2 hypothetical protein compare
PS417_22715 -0.6 -1.3 heme oxygenase compare
PS417_16255 -0.6 -2.7 RNA polymerase sigma factor compare
PS417_12870 -0.6 -1.3 enoyl-CoA hydratase compare
PS417_08575 -0.6 -2.1 MarR family transcriptional regulator compare
PS417_16920 -0.6 -2.0 multidrug RND transporter compare
PS417_27305 -0.6 -3.7 5-formyltetrahydrofolate cyclo-ligase compare
PS417_05815 -0.6 -2.9 recombinase RecA compare
PS417_27595 -0.6 -1.3 recombinase XerC compare
PS417_13425 -0.6 -1.3 cupin compare
PS417_27815 -0.6 -1.3 hypothetical protein compare
PS417_11930 -0.6 -3.1 hypothetical protein compare
PS417_23205 -0.6 -1.3 transcriptional regulator compare
PS417_17305 -0.6 -1.2 hypothetical protein compare
PS417_11670 -0.6 -2.2 multidrug transporter MATE compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source Inosine in Pseudomonas simiae WCS417

For carbon source Inosine across organisms