Experiment set3IT018 for Agrobacterium fabrum C58

Compare to:

Glycine nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu0972 -7.8 -5.4 lipA protein compare
Atu0679 -6.7 -6.5 ATP phosphoribosyltransferase compare
Atu1750 -5.9 -7.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu0017 -5.7 -4.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2710 -5.5 -5.4 hypothetical protein compare
Atu2791 -5.5 -10.6 3-isopropylmalate dehydrogenase compare
Atu2289 -5.4 -20.0 anthranilate synthase component I and II compare
Atu0537 -5.4 -6.4 histidinol dehydrogenase compare
Atu0043 -5.3 -3.6 imidazoleglycerol-phosphate dehydratase compare
Atu1030 -5.2 -3.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1464 -5.1 -9.9 glycine cleavage system T protein, aminomethyltransferase compare
Atu0099 -4.9 -15.5 prephenate dehydratase compare
Atu1687 -4.9 -10.1 anthranilate phosphoribosyltransferase compare
Atu0678 -4.9 -8.2 histidyl-tRNA synthetase compare
Atu0400 -4.9 -7.4 orotate phosphoribosyltransferase compare
Atu1688 -4.7 -6.2 indole-3-glycerol-phosphate synthase compare
Atu2264 -4.6 -16.2 2-isopropylmalate synthase compare
Atu0432 -4.6 -12.5 O-succinylhomoserine sulfhydrylase compare
Atu1462 -4.6 -16.7 glycine cleavage system protein P2 compare
Atu1205 -4.5 -15.8 threonine dehydratase compare
Atu0039 -4.5 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu3469 -4.4 -4.3 phosphoglyceromutase compare
Atu2036 -4.4 -17.8 acetolactate synthase III, large subunit compare
Atu2709 -4.4 -18.9 3-isopropylmalate dehydratase, large subunit compare
Atu3739 -4.3 -4.5 phosphoglycerate kinase compare
Atu2718 -4.3 -10.7 homoserine O-succinyltransferase compare
Atu1446 -4.3 -5.0 two component response regulator compare
Atu0035 -4.2 -10.2 phosphoenolpyruvate carboxykinase compare
Atu3740 -4.2 -11.4 fructose bisphosphate aldolase compare
Atu1588 -4.2 -13.7 homoserine dehydrogenase compare
Atu0041 -4.1 -3.4 glutamine amidotransferase compare
Atu0399 -4.1 -8.8 dihydroorotase compare
Atu3885 -3.9 -12.8 inositol monophosphatase compare
Atu4505 -3.9 -10.5 LacI family transcriptional regulator compare
Atu1620 -3.9 -16.0 triosephosphate isomerase compare
Atu2650 -3.9 -16.8 glycerol-3-phosphate dehydrogenase compare
Atu0647 -3.8 -9.4 phosphoribosylamine--glycine ligase compare
Atu1463 -3.8 -9.0 glycine cleavage system component H compare
Atu0038 -3.3 -5.7 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0486 -3.3 -8.5 dihydroorotate dehydrogenase compare
Atu1307 -3.3 -9.4 dihydroorotase compare
Atu1844 -3.2 -4.3 Phosphoribosylformylglycinamidine synthetase compare
Atu2790 -3.2 -3.4 3-isopropylmalate dehydratase, small subunit compare
Atu1308 -3.2 -8.3 aspartate carbamoyl transferase catalytic subunit compare
Atu1075 -3.2 -8.5 amidophosphoribosyltransferase compare
Atu3754 -3.1 -9.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2747 -3.1 -14.6 hypothetical protein compare
Atu0030 -3.0 -2.5 phosphocarrier protein HPr compare
Atu1850 -3.0 -3.0 phosphoribosylformylglycinamidine synthetase II compare
Atu2115 -3.0 -9.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu1140 -2.8 -6.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0298 -2.8 -8.6 orotidine 5 compare
Atu3731 -2.7 -12.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu2155 -2.7 -17.8 methionine synthase compare
Atu3755 -2.7 -7.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1845 -2.6 -4.6 phosphoribosylformylglycinamidine synthase I compare
Atu0029 -2.6 -6.3 S-adenosylhomocysteine hydrolase compare
Atu2015 -2.6 -11.7 aminotransferase compare
Atu0332 -2.6 -14.1 RNA polymerase sigma-54 factor compare
Atu1141 -2.5 -8.3 Phosphoribosylglycinamide synthetase compare
Atu1686 -2.5 -14.3 peptidyl-prolyl cis-trans isomerse D compare
Atu1445 -2.4 -7.4 two component sensor kinase compare
Atu0346 -2.4 -2.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2801 -2.2 -5.1 precorrin-2 C20 methyltransferase compare
Atu1589 -2.2 -10.2 aminotransferase, class I compare
Atu1759 -2.2 -12.6 L-serine dehydratase conserved
Atu2800 -2.2 -6.8 precorrin-3B C17-methyltransferase compare
Atu3783 -2.1 -13.9 glutamate synthase subunit beta compare
Atu1891 -2.1 -4.3 cobalamin biosynthesis protein compare
Atu3784 -2.0 -15.6 glutamate synthase large subunit compare
Atu4018 -1.9 -11.7 two component sensor kinase compare
Atu1456 -1.9 -9.3 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu0040 -1.9 -1.3 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2798 -1.8 -5.2 precorrin-6y methyltransferase compare
Atu2796 -1.8 -7.5 precorrin-4 C11-methyltransferase compare
Atu2793 -1.8 -6.5 cobyrinic acid a,c-diamide synthase compare
Atu4217 -1.7 -3.1 TetR family transcriptional regulator compare
Atu4711 -1.7 -9.1 two component sensor kinase compare
Atu4019 -1.6 -7.1 two component response regulator compare
Atu2809 -1.6 -7.6 cobalamin biosynthesis protein compare
Atu2804 -1.6 -9.7 cobaltochelatase subunit compare
Atu2802 -1.6 -8.5 precorrin-8X methylmutase compare
Atu3707 -1.6 -3.4 phosphoserine aminotransferase compare
Atu2805 -1.5 -7.2 cobalamin synthesis protein compare
Atu0769 -1.5 -2.7 protoheme IX farnesyltransferase compare
Atu2799 -1.5 -4.3 precorrin-6x reductase compare
Atu1542 -1.4 -6.5 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2808 -1.4 -6.5 cobyric acid synthase compare
Atu2795 -1.4 -8.2 cobalamin biosynthetic protein compare
Atu1455 -1.4 -3.5 hypothetical protein compare
Atu4773 -1.4 -2.6 two component response regulator compare
Atu2807 -1.3 -5.8 cob(I)alamin adenosyltransferase compare
Atu1774 -1.3 -6.3 ABC transporter, substrate binding protein (peptide) compare
Atu2803 -1.3 -4.3 Cobalamin biosynthesis associated protein compare
Atu1359 -1.3 -1.4 dnaK deletion suppressor protein compare
Atu2548 -1.3 -9.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1454 -1.3 -5.3 siroheme synthase compare
Atu0422 -1.3 -2.1 ABC transporter, membrane spanning protein compare
Atu1579 -1.2 -7.8 ABC transporter, membrane spanning protein (amino acid) compare
Atu3296 -1.2 -7.7 two component response regulator for C4-dicarboxylate transport compare
Atu0190 -1.2 -5.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3468 -1.2 -1.2 hypothetical protein compare
Atu2131 -1.1 -6.1 hypothetical protein compare
Atu2416 -1.1 -6.9 glutamine synthetase compare
Atu3298 -1.1 -7.9 C4-dicarboxylate transporter DctA compare
Atu4609 -1.1 -8.1 glycosyltransferase compare
Atu1577 -1.1 -4.6 ABC transporter, substrate binding protein (amino acid) compare
Atu1580 -1.1 -6.5 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu3732 -1.1 -5.0 hemolysin compare
Atu4608 -1.1 -8.2 hypothetical protein compare
Atu3663 -1.0 -1.8 hypothetical protein compare
Atu3297 -1.0 -6.5 two component sensor kinase for C4-dicarboxylate transport compare
Atu1578 -1.0 -5.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu1028 -1.0 -2.1 hypothetical protein compare
Atu8115 -1.0 -4.0 Hypothetical Protein compare
Atu4610 -1.0 -7.2 sugar nucleotide epimerase/dehydratase compare
Atu0977 -1.0 -2.5 serine protease DO-like protease compare
Atu0777 -1.0 -1.1 hypothetical protein compare
Atu2207 -1.0 -3.0 two component sensor kinase compare
Atu2017 -0.9 -1.3 hypothetical protein compare
Atu2797 -0.9 -2.4 cobalamin biosynthesis protein compare
Atu3429 -0.9 -1.6 hypothetical protein compare
Atu3496 -0.9 -2.7 hypothetical protein compare
Atu8052 -0.9 -1.6 hypothetical protein compare
Atu0723 -0.9 -1.6 FAD dependent oxidoreductase compare
Atu4072 -0.9 -1.5 nodulation protein N compare
Atu1572 -0.9 -4.5 hydrolase compare
Atu4317 -0.9 -3.3 TetR family transcriptional regulator compare
Atu1457 -0.9 -1.7 hypothetical protein compare
Atu3009 -0.9 -1.2 exopolysaccharide production protein compare
Atu2215 -0.8 -4.4 hypothetical protein compare
Atu2376 -0.8 -0.6 hypothetical protein compare
Atu8088 -0.8 -2.1 hypothetical protein compare
Atu1373 -0.8 -4.2 hypothetical protein compare
Atu4166 -0.8 -2.0 UDP-glucose 4-epimerase compare
Atu0026 -0.8 -1.0 hypothetical protein compare
Atu2722 -0.8 -4.8 porin compare
Atu3668 -0.8 -2.8 siderophore biosynthesis protein compare
Atu0361 -0.8 -2.2 transcriptional regulator compare
Atu4173 -0.8 -2.2 phosphoenolpyruvate-protein phosphotransferase compare
Atu4346 -0.8 -3.2 hypothetical protein compare
Atu4882 -0.8 -1.8 hypothetical protein compare
Atu8167 -0.7 -5.1 putative transmembrane protein compare
Atu0641 -0.7 -2.6 hypothetical protein compare
Atu4888 -0.7 -3.1 hypothetical protein compare
Atu1573 -0.7 -1.0 hypothetical protein compare
Atu1163 -0.7 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3730 -0.7 -0.9 hypothetical protein compare
Atu0322 -0.7 -3.2 enoyl CoA hydratase compare
Atu6114 -0.7 -1.7 hypothetical protein compare
Atu1354 -0.7 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0845 -0.7 -3.3 hypothetical protein compare
Atu2762 -0.7 -2.7 hypothetical protein compare
Atu2209 -0.7 -2.6 pyrroline-5-carboxylate reductase compare
Atu3017 -0.7 -0.9 phosphoglyceromutase compare
Atu1764 -0.7 -4.5 methylenetetrahydrofolate reductase compare
Atu5115 -0.7 -0.8 hypothetical protein compare
Atu3483 -0.6 -2.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu5164 -0.6 -0.7 type IV secretion protein AvhB3 compare
Atu3006 -0.6 -2.4 hypothetical protein compare
Atu4890 -0.6 -1.3 IS426 transposase compare
Atu0188 -0.6 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu0079 -0.6 -3.8 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu2439 -0.6 -0.6 hypothetical protein compare
Atu0544 -0.6 -1.4 hypothetical protein compare
Atu4477 -0.6 -3.5 TetR family transcriptional regulator compare
Atu2067 -0.6 -0.7 hypothetical protein compare
Atu3482 -0.6 -3.5 pantoate--beta-alanine ligase compare
Atu2758 -0.6 -4.3 ammonium transporter compare
Atu3763 -0.6 -1.1 hypothetical protein compare
Atu3759 -0.6 -1.2 hypothetical protein compare
Atu2235 -0.6 -1.9 hypothetical protein compare
Atu4854 -0.6 -2.4 hypothetical protein compare
Atu3005 -0.6 -0.5 hypothetical protein compare
Atu3634 -0.6 -2.8 penicillin-binding protein dacf precursor compare
Atu2634 -0.6 -1.4 hypothetical protein compare
Atu0971 -0.6 -2.2 two component sensor kinase compare
Atu3020 -0.6 -2.6 GntR family transcriptional regulator compare
Atu3008 -0.6 -0.7 hypothetical protein compare
Atu4865 -0.5 -4.1 oxidoreductase compare
Atu1634 -0.5 -1.1 hypothetical protein compare
Atu3012 -0.5 -0.8 hypothetical protein compare
Atu3733 -0.5 -1.2 hypothetical protein compare
Atu0690 -0.5 -1.7 hypothetical protein compare
Atu4873 -0.5 -2.9 TetR family transcriptional regulator compare
Atu1546 -0.5 -1.4 transcriptional regulator, MerR family compare
Atu8046 -0.5 -1.6 hypothetical protein compare
Atu8093 -0.5 -2.3 hypothetical protein compare
Atu2043 -0.5 -3.1 htrA family protein compare
Atu0291 -0.5 -3.7 hypothetical protein compare
Atu0611 -0.5 -2.6 ABC transporter, membrane spanning protein compare
Atu2810 -0.5 -3.3 cobalamin biosynthetic protein compare
Atu0687 -0.5 -1.4 hypothetical protein compare
Atu2442 -0.5 -1.3 hypothetical protein compare
Atu3032 -0.5 -2.3 hypothetical protein compare
Atu0189 -0.5 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu3676 -0.5 -3.4 siderophore biosynthesis protein compare
Atu3034 -0.5 -2.3 ROK family transcriptional regulator compare
Atu0533 -0.5 -1.5 putative inhibitor of septum formation compare
Atu4868 -0.5 -3.6 oxidoreductase compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source Glycine in Agrobacterium fabrum C58

For nitrogen source Glycine across organisms