Experiment set3IT015 for Pseudomonas simiae WCS417

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N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
PS417_01575 -9.6 -5.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_01855 -7.5 -4.7 phosphoribosyl-AMP cyclohydrolase compare
PS417_04415 -7.0 -6.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_25720 -6.6 -7.8 anthranilate synthase component II compare
PS417_23805 -6.5 -6.3 acetolactate synthase 3 regulatory subunit compare
PS417_18560 -6.5 -9.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_26740 -6.3 -12.9 homoserine acetyltransferase compare
PS417_25725 -6.3 -17.8 anthranilate synthase component I compare
PS417_18585 -6.2 -7.4 3-isopropylmalate dehydrogenase compare
PS417_23800 -6.2 -9.5 ketol-acid reductoisomerase compare
PS417_18595 -5.9 -4.6 3-isopropylmalate dehydratase compare
PS417_00185 -5.9 -5.7 tryptophan synthase subunit beta compare
PS417_04420 -5.9 -13.1 histidinol dehydrogenase compare
PS417_18600 -5.8 -4.8 isopropylmalate isomerase compare
PS417_12855 -5.8 -4.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_23810 -5.6 -14.0 acetolactate synthase 3 catalytic subunit compare
PS417_01565 -5.6 -4.6 imidazole glycerol phosphate synthase compare
PS417_22980 -5.4 -6.3 GntR family transcriptional regulator conserved
PS417_16465 -5.4 -10.8 sirohydrochlorin ferrochelatase compare
PS417_23545 -5.3 -5.2 gamma-glutamyl kinase compare
PS417_20125 -5.3 -5.2 phosphoribosylglycinamide formyltransferase compare
PS417_24745 -5.3 -6.3 gamma-glutamyl phosphate reductase compare
PS417_02510 -5.1 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
PS417_27795 -5.1 -2.0 orotate phosphoribosyltransferase compare
PS417_27040 -5.0 -5.8 3-phosphoglycerate dehydrogenase compare
PS417_01850 -5.0 -8.8 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_23995 -4.8 -1.9 preprotein translocase subunit SecG compare
PS417_03925 -4.8 -10.4 nicotinate-nucleotide pyrophosphorylase compare
PS417_23110 -4.7 -10.1 2-isopropylmalate synthase compare
PS417_18530 -4.6 -5.4 O-succinylhomoserine sulfhydrylase compare
PS417_01210 -4.6 -8.7 hypothetical protein compare
PS417_23000 -4.5 -8.9 PTS N-acetyl-D-glucosamine transporter conserved
PS417_02005 -4.4 -10.3 glutamate synthase compare
PS417_02415 -4.3 -8.0 phosphoserine phosphatase compare
PS417_02000 -4.3 -17.5 glutamate synthase compare
PS417_27195 -4.2 -2.2 N-acetylglutamate synthase compare
PS417_22995 -4.2 -7.3 PTS N-acetyl-D-glucosamine transporter conserved
PS417_08125 -4.2 -2.3 prephenate dehydratase compare
PS417_25710 -4.1 -2.3 indole-3-glycerol-phosphate synthase compare
PS417_12290 -4.1 -6.0 sulfite reductase compare
PS417_28220 -4.1 -4.0 LysR family transcriptional regulator compare
PS417_09725 -4.0 -10.4 transporter compare
PS417_01580 -4.0 -2.0 imidazole glycerol phosphate synthase compare
PS417_16570 -4.0 -6.6 isocitrate lyase compare
PS417_21035 -3.8 -11.1 multidrug transporter compare
PS417_22985 -3.8 -8.8 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) conserved
PS417_20160 -3.7 -6.3 cysteine synthase compare
PS417_01605 -3.7 -3.5 phosphoglycerate mutase compare
PS417_26995 -3.6 -9.8 phosphoserine phosphatase compare
PS417_24155 -3.5 -4.7 ATP-binding protein compare
PS417_22990 -3.5 -2.8 iron dicitrate transport regulator FecR compare
PS417_24765 -3.5 -7.6 membrane protein compare
PS417_22690 -3.5 -5.4 phosphogluconate dehydratase compare
PS417_05595 -3.4 -5.9 ornithine carbamoyltransferase compare
PS417_22385 -3.4 -14.4 quinolinate synthase A compare
PS417_21750 -3.3 -21.7 acetyl-CoA synthetase compare
PS417_25715 -3.3 -4.3 anthranilate phosphoribosyltransferase compare
PS417_26040 -3.3 -4.0 malate synthase compare
PS417_20985 -3.3 -5.8 porin compare
PS417_26745 -3.2 -3.0 methionine biosynthesis protein MetW compare
PS417_00180 -3.1 -4.7 tryptophan synthase subunit alpha compare
PS417_20610 -3.1 -2.3 hypothetical protein compare
PS417_27435 -3.0 -9.0 polyphosphate kinase compare
PS417_06375 -3.0 -2.0 deoxycytidine triphosphate deaminase compare
PS417_26890 -2.9 -4.1 dihydroxy-acid dehydratase compare
PS417_26730 -2.7 -1.9 pyrroline-5-carboxylate reductase compare
PS417_14940 -2.7 -3.9 LysR family transcriptional regulator compare
PS417_23770 -2.6 -4.0 exodeoxyribonuclease V subunit alpha compare
PS417_01560 -2.4 -2.9 imidazoleglycerol-phosphate dehydratase compare
PS417_01710 -2.4 -4.8 histidine utilization repressor compare
PS417_21020 -2.4 -14.1 phosphoenolpyruvate synthase conserved
PS417_27875 -2.4 -9.9 histidine kinase compare
PS417_17490 -2.4 -3.8 ABC transporter ATP-binding protein compare
PS417_22695 -2.2 -12.9 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_24100 -2.2 -9.3 transcriptional regulator PdhR compare
PS417_05165 -2.2 -4.6 cytosol aminopeptidase compare
PS417_23775 -2.1 -2.7 exodeoxyribonuclease V subunit beta compare
PS417_28100 -2.0 -8.0 glucose-6-phosphate 1-epimerase [EC: 5.1.3.15] (from data) conserved
PS417_08155 -2.0 -3.0 integration host factor subunit beta compare
PS417_04180 -2.0 -2.9 GntR family transcriptional regulator compare
PS417_01570 -1.9 -1.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_08225 -1.8 -5.4 acetolactate synthase compare
PS417_26985 -1.8 -4.9 phosphoenolpyruvate-protein phosphotransferase compare
PS417_21705 -1.8 -6.1 arginine N-succinyltransferase compare
PS417_11430 -1.8 -8.1 EamA compare
PS417_16990 -1.8 -8.9 acyl-CoA dehydrogenase compare
PS417_25730 -1.8 -4.4 phosphoglycolate phosphatase compare
PS417_20855 -1.7 -1.3 hypothetical protein compare
PS417_25920 -1.7 -7.6 pyrroloquinoline quinone biosynthesis protein PqqF conserved
PS417_17485 -1.7 -8.0 membrane protein compare
PS417_27535 -1.7 -8.3 chemotaxis protein CheY compare
PS417_17495 -1.7 -7.8 multidrug ABC transporter permease compare
PS417_27305 -1.7 -6.4 5-formyltetrahydrofolate cyclo-ligase compare
PS417_02225 -1.7 -3.6 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_08205 -1.6 -4.9 acetyltransferase compare
PS417_24835 -1.6 -7.2 hypothetical protein compare
PS417_07115 -1.6 -10.8 L-aspartate oxidase compare
PS417_27835 -1.6 -5.7 endoribonuclease compare
PS417_22520 -1.6 -2.8 histidine kinase compare
PS417_27010 -1.6 -7.1 threonine dehydratase compare
PS417_27035 -1.6 -6.9 FAD-linked oxidase compare
PS417_08245 -1.6 -1.6 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_04365 -1.6 -1.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_17480 -1.5 -5.0 branched-chain amino acid ABC transporter substrate-binding protein compare
PS417_27135 -1.5 -1.5 glutamine synthetase compare
PS417_09695 -1.5 -3.1 hydrolase compare
PS417_11845 -1.5 -5.4 RpiR family transcriptional regulator compare
PS417_25940 -1.5 -6.8 pyrroloquinoline quinone biosynthesis protein PqqE compare
PS417_09705 -1.5 -4.6 hypothetical protein compare
PS417_17455 -1.5 -5.4 cytochrome C compare
PS417_08135 -1.4 -5.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_20635 -1.4 -1.4 ABC transporter ATP-binding protein compare
PS417_05695 -1.4 -6.2 transcriptional regulator compare
PS417_08230 -1.4 -2.0 lipopolysaccharide biosynthesis protein RfbH compare
PS417_17450 -1.4 -5.2 amino acid ABC transporter substrate-binding protein compare
PS417_05840 -1.3 -4.1 LuxR family transcriptional regulator compare
PS417_12310 -1.3 -7.5 methionine synthase compare
PS417_08195 -1.3 -7.5 hypothetical protein compare
PS417_10405 -1.3 -1.8 filamentous hemagglutinin compare
PS417_04410 -1.3 -1.3 hypothetical protein compare
PS417_17415 -1.3 -4.2 histidine kinase compare
PS417_09210 -1.3 -2.0 TetR family transcriptional regulator compare
PS417_08220 -1.3 -1.2 epimerase compare
PS417_17505 -1.3 -3.9 LuxR family transcriptional regulator compare
PS417_27595 -1.3 -3.5 recombinase XerC compare
PS417_25930 -1.3 -5.8 pyrroloquinoline quinone biosynthesis protein PqqC compare
PS417_01195 -1.3 -2.9 RNA-binding protein S4 compare
PS417_08200 -1.2 -2.5 hypothetical protein compare
PS417_11530 -1.2 -2.7 amidase compare
PS417_16510 -1.2 -3.6 Clp protease ClpX compare
PS417_08430 -1.2 -6.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
PS417_04650 -1.2 -2.0 D-alanine--D-alanine ligase compare
PS417_17435 -1.2 -7.0 dehydrogenase compare
PS417_17565 -1.2 -4.3 branched-chain amino acid aminotransferase compare
PS417_26510 -1.2 -7.2 5,10-methylenetetrahydrofolate reductase compare
PS417_21010 -1.2 -6.0 ribonuclease activity regulator protein RraA compare
PS417_12840 -1.2 -3.2 TetR family transcriptional regulator compare
PS417_21125 -1.1 -5.9 phosphoadenosine phosphosulfate reductase compare
PS417_20025 -1.1 -1.1 alpha-ribazole phosphatase compare
PS417_17425 -1.1 -3.8 hypothetical protein compare
PS417_23900 -1.1 -6.8 poly(A) polymerase compare
PS417_06200 -1.1 -3.7 protein-PII uridylyltransferase compare
PS417_09235 -1.1 -1.3 molecular chaperone compare
PS417_17420 -1.1 -6.2 ethanol oxidation regulatory protein ercA (from data) compare
PS417_22570 -1.0 -1.3 H-NS histone compare
PS417_04585 -1.0 -1.5 hypothetical protein compare
PS417_08730 -1.0 -1.7 cytochrome C compare
PS417_19965 -1.0 -6.5 histidine kinase compare
PS417_09710 -1.0 -2.5 dehydrogenase compare
PS417_20665 -1.0 -4.9 hypothetical protein compare
PS417_08580 -1.0 -5.8 histidine kinase compare
PS417_11440 -1.0 -1.1 hypothetical protein compare
PS417_17945 -1.0 -1.4 hypothetical protein compare
PS417_28510 -1.0 -3.4 chromosome partitioning protein compare
PS417_22445 -1.0 -2.5 ATP-dependent DNA helicase RuvB compare
PS417_03935 -1.0 -3.7 N-acetyl-anhydromuranmyl-L-alanine amidase compare
PS417_23490 -0.9 -1.6 dihydrofolate reductase compare
PS417_16715 -0.9 -1.8 DoxX family protein compare
PS417_21655 -0.9 -1.4 aspartate kinase compare
PS417_15135 -0.9 -1.3 hypothetical protein compare
PS417_22450 -0.9 -1.3 ATP-dependent DNA helicase RuvA compare
PS417_18730 -0.9 -3.4 ABC transporter permease compare
PS417_07170 -0.9 -3.7 hypothetical protein compare
PS417_26005 -0.9 -5.1 biotin synthase compare
PS417_13510 -0.9 -1.3 polyketide cyclase compare
PS417_27930 -0.9 -1.2 type VI secretion protein compare
PS417_26120 -0.9 -2.1 hypothetical protein compare
PS417_21700 -0.9 -3.8 arginine N-succinyltransferase compare
PS417_12805 -0.8 -5.8 glycogen branching protein compare
PS417_05815 -0.8 -3.8 recombinase RecA compare
PS417_27870 -0.8 -2.7 ATP-dependent DNA helicase RecG compare
PS417_13140 -0.8 -1.6 oxidoreductase compare
PS417_09930 -0.8 -1.7 hypothetical protein compare
PS417_20140 -0.8 -2.8 nucleoprotein/polynucleotide-associated enzyme compare
PS417_09470 -0.8 -1.5 hypothetical protein compare
PS417_02805 -0.8 -1.4 urease subunit gamma compare
PS417_14920 -0.8 -3.0 CoA-transferase compare
PS417_08025 -0.8 -1.2 acetylornithine aminotransferase compare
PS417_08990 -0.8 -1.7 ABC transporter substrate-binding protein compare
PS417_00845 -0.8 -1.3 transcriptional regulator compare
PS417_05540 -0.8 -2.4 histidine kinase compare
PS417_10425 -0.8 -1.9 hypothetical protein compare
PS417_21210 -0.8 -1.5 amidotransferase compare
PS417_10715 -0.8 -2.0 Cro/Cl family transcriptional regulator compare
PS417_27155 -0.8 -1.5 aliphatic sulfonates transport ATP-binding subunit compare
PS417_18420 -0.8 -2.1 deoxyribonuclease compare
PS417_11435 -0.7 -3.6 asparagine synthase compare
PS417_17980 -0.7 -1.8 ABC transporter permease compare
PS417_05455 -0.7 -4.3 XRE family transcriptional regulator compare
PS417_03260 -0.7 -2.2 5S ribosomal RNA compare
PS417_04595 -0.7 -2.4 cell division protein MraZ compare
PS417_11930 -0.7 -4.4 hypothetical protein compare
PS417_04270 -0.7 -3.1 ribonuclease G compare
PS417_13855 -0.7 -1.2 acetyl-CoA acetyltransferase compare
PS417_19335 -0.7 -2.2 isochorismatase compare
PS417_03785 -0.7 -1.1 pilus assembly protein PilV compare
PS417_07940 -0.7 -1.4 hypothetical protein compare
PS417_26695 -0.7 -1.1 uracil phosphoribosyltransferase compare
PS417_06195 -0.7 -3.0 succinyldiaminopimelate aminotransferase compare
PS417_10995 -0.7 -1.3 GntR family transcriptional regulator compare


Specific Phenotypes

For 17 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Pseudomonas simiae WCS417

For carbon source N-Acetyl-D-Glucosamine across organisms