Experiment set3IT014 for Agrobacterium fabrum C58

Compare to:

Carnitine Hydrochloride nitrogen source

200 most important genes:

  gene name fitness t score description  
Atu6189 -2.3 -1.1 protein secretion chaperone compare
Atu0041 -2.0 -1.9 glutamine amidotransferase compare
Atu0225 -1.9 -1.3 hypothetical protein compare
Atu5475 -1.8 -2.3 hypothetical protein compare
Atu5430 -1.8 -1.4 hypothetical protein compare
Atu1446 -1.7 -3.2 two component response regulator compare
Atu1714 -1.6 -2.1 exonuclease III compare
Atu1750 -1.5 -6.6 phosphoribosyl c-AMP cyclohydrolase compare
Atu0678 -1.4 -3.6 histidyl-tRNA synthetase compare
Atu0679 -1.4 -4.4 ATP phosphoribosyltransferase compare
Atu2335 -1.4 -2.5 hypothetical protein compare
Atu2684 -1.4 -1.6 hypothetical protein compare
Atu3739 -1.3 -3.1 phosphoglycerate kinase compare
Atu1687 -1.3 -6.0 anthranilate phosphoribosyltransferase compare
Atu1219 -1.2 -0.8 hypothetical protein compare
Atu1688 -1.2 -3.6 indole-3-glycerol-phosphate synthase compare
Atu0346 -1.2 -1.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3120 -1.1 -1.7 hypothetical protein compare
Atu8056 -1.1 -1.2 hypothetical protein compare
Atu0025 -1.1 -1.9 hypothetical protein compare
Atu0332 -1.1 -5.3 RNA polymerase sigma-54 factor compare
Atu1754 -1.1 -1.9 hypothetical protein compare
Atu0043 -1.1 -1.6 imidazoleglycerol-phosphate dehydratase compare
Atu0421 -1.1 -1.3 ABC transporter, membrane spanning protein compare
Atu2040 -1.0 -3.7 phosphoserine phosphatase compare
Atu2289 -1.0 -7.2 anthranilate synthase component I and II compare
Atu8046 -1.0 -1.0 hypothetical protein compare
Atu3469 -1.0 -2.6 phosphoglyceromutase compare
Atu0354 -1.0 -1.9 ferric uptake regulator compare
Atu0723 -1.0 -1.6 FAD dependent oxidoreductase compare
Atu6106 -0.9 -1.1 conserved hypothetical protein compare
Atu6098 -0.9 -0.4 transcriptional regulator, HTH family compare
Atu5034 -0.9 -1.3 hypothetical protein compare
Atu5186 -0.9 -1.2 hypothetical protein compare
Atu5155 -0.9 -1.9 MarR family transcriptional regulator compare
Atu0977 -0.9 -2.5 serine protease DO-like protease compare
Atu0188 -0.9 -1.7 ABC transporter, membrane spanning protein (peptide) compare
Atu3707 -0.9 -1.5 phosphoserine aminotransferase compare
Atu4173 -0.9 -2.0 phosphoenolpyruvate-protein phosphotransferase compare
Atu1291 -0.8 -1.7 hypothetical protein compare
Atu0026 -0.8 -0.8 hypothetical protein compare
Atu1810 -0.8 -1.1 hypothetical protein compare
Atu3706 -0.8 -3.9 D-3-phosphoglycerate dehydrogenase compare
Atu0585 -0.8 -1.8 hypothetical protein compare
Atu1163 -0.8 -1.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0971 -0.8 -2.3 two component sensor kinase compare
Atu5046 -0.8 -1.4 hypothetical protein compare
Atu0537 -0.8 -4.0 histidinol dehydrogenase compare
Atu2718 -0.8 -3.5 homoserine O-succinyltransferase compare
Atu0470 -0.8 -1.3 hypothetical protein compare
Atu0861 -0.8 -2.4 hypothetical protein compare
Atu0130 -0.8 -2.0 cytidine deaminase compare
Atu1629 -0.8 -1.0 transcriptional regulator, ArsR family compare
Atu8161 -0.8 -0.8 hypothetical protein compare
Atu2442 -0.8 -1.4 hypothetical protein compare
Atu1457 -0.8 -2.9 hypothetical protein compare
Atu4773 -0.8 -1.0 two component response regulator compare
Atu0035 -0.7 -4.5 phosphoenolpyruvate carboxykinase compare
Atu0040 -0.7 -0.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0017 -0.7 -1.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu8034 -0.7 -1.9 hypothetical protein compare
Atu4139 -0.7 -1.7 hypothetical protein compare
Atu8181 -0.7 -1.1 hypothetical protein compare
Atu0836 -0.7 -1.5 Glutathione-S-transferase compare
Atu1620 -0.7 -3.9 triosephosphate isomerase compare
Atu4217 -0.7 -1.1 TetR family transcriptional regulator compare
Atu6119 -0.7 -3.0 conserved hypothetical protein compare
Atu0966 -0.7 -1.5 hypothetical protein compare
Atu0030 -0.7 -0.9 phosphocarrier protein HPr compare
Atu2680 -0.7 -2.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu6111 -0.6 -2.3 conserved hypothetical protein compare
Atu5462 -0.6 -1.8 ABC transporter nucleotide binding/ATPase compare
Atu2059 -0.6 -3.7 transcriptional regulator, TetR family compare
Atu8156 -0.6 -1.6 hypothetical protein compare
Atu4019 -0.6 -3.5 two component response regulator compare
Atu2192 -0.6 -0.9 hypothetical protein compare
Atu2827 -0.6 -2.4 hypothetical protein compare
Atu2790 -0.6 -0.9 3-isopropylmalate dehydratase, small subunit compare
Atu5166 -0.6 -2.5 type IV secretion protein AvhB5 compare
Atu2236 -0.6 -2.1 adenine phosphoribosyltransferase compare
Atu8087 -0.6 -0.7 putative peptidoglycan binding protein compare
Atu6096 -0.6 -1.8 conserved hypothetical protein compare
Atu1123 -0.6 -2.4 hypothetical protein compare
Atu5070 -0.6 -3.4 ABC transporter membrane spanning protein (oligopeptide) compare
Atu1254 -0.6 -1.1 transcriptional regulator, ArsR family compare
Atu2433 -0.6 -0.8 hypothetical protein compare
Atu1058 -0.6 -3.3 hypothetical protein compare
Atu2432 -0.6 -1.3 hypothetical protein compare
Atu1774 -0.6 -2.5 ABC transporter, substrate binding protein (peptide) compare
Atu2264 -0.6 -3.7 2-isopropylmalate synthase compare
Atu2115 -0.6 -2.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu5415 -0.6 -2.2 hypothetical protein compare
Atu0039 -0.5 -0.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu2376 -0.5 -1.3 hypothetical protein compare
Atu4018 -0.5 -3.0 two component sensor kinase compare
Atu3466 -0.5 -1.5 ArsR family transcriptional regulator compare
Atu4711 -0.5 -2.2 two component sensor kinase compare
Atu3783 -0.5 -3.9 glutamate synthase subunit beta compare
Atu0448 -0.5 -1.8 hypothetical protein compare
Atu5467 -0.5 -1.4 hypothetical protein compare
Atu2791 -0.5 -2.7 3-isopropylmalate dehydrogenase compare
Atu0755 -0.5 -2.0 hypothetical protein compare
Atu3468 -0.5 -0.6 hypothetical protein compare
Atu2672 -0.5 -2.0 hypothetical protein compare
Atu6114 -0.5 -0.9 hypothetical protein compare
Atu3008 -0.5 -0.6 hypothetical protein compare
Atu5114 -0.5 -0.6 hypothetical protein compare
Atu2758 -0.5 -3.7 ammonium transporter compare
Atu2770 -0.5 -2.0 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu0894 -0.5 -1.4 ABC transporter, membrane spanning protein compare
Atu0099 -0.5 -2.2 prephenate dehydratase compare
Atu5061 -0.5 -1.0 glycerophosphoryl diester phosphodiesterase compare
Atu2428 -0.5 -2.8 exopolysaccharide production protein PssB compare
Atu0895 -0.5 -1.7 ABC transporter, substrate binding protein compare
Atu0435 -0.5 -0.7 tRNA-Gly compare
Atu0184 -0.5 -1.2 glucokinase compare
Atu8063 -0.5 -0.8 hypothetical protein compare
Atu1039 -0.5 -1.4 DNA repair protein RecO compare
Atu4586 -0.5 -2.0 choloylglycine hydrolase family protein compare
Atu0885 -0.5 -1.4 hypothetical protein compare
Atu1804 -0.5 -2.7 hypothetical protein compare
Atu4582 -0.5 -1.5 ferredoxin compare
Atu2319 -0.5 -2.4 quaternary ammonium compound-resistance protein compare
Atu5207 -0.5 -1.6 hypothetical protein compare
Atu1302 -0.5 -1.3 hypothetical protein compare
Atu6130 -0.5 -1.7 conserved hypothetical protein compare
Atu5030 -0.5 -2.0 hypothetical protein compare
Atu0190 -0.5 -2.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3264 -0.5 -1.9 IclR family transcriptional regulator compare
Atu1475 -0.5 -1.1 hypothetical protein compare
Atu0300 -0.5 -2.1 methyltransferase compare
Atu2396 -0.5 -1.8 urease accessory protein compare
Atu6145 -0.5 -2.2 arabinose phosphate phosphatase compare
Atu4061 -0.5 -1.6 exopolysaccharide production repressor protein compare
Atu2683 -0.5 -0.8 hypothetical protein compare
Atu4407 -0.5 -1.4 periplasmic nitrate reductase, NapD protein compare
Atu6009 -0.5 -1.3 indole-3-lactate synthase compare
Atu6085 -0.5 -2.2 ABC transporter, substrate binding protein (nitrate/sulfonate) compare
Atu8162 -0.5 -0.5 hypothetical protein compare
Atu6168 -0.5 -2.0 component of type IV secretion system, pilin subunit compare
Atu2709 -0.5 -3.3 3-isopropylmalate dehydratase, large subunit compare
Atu3317 -0.5 -2.0 hypothetical protein compare
Atu0536 -0.5 -2.2 hypothetical protein compare
Atu5179 -0.5 -1.6 hypothetical protein compare
Atu0369 -0.5 -1.7 hypothetical protein compare
Atu0303 -0.5 -1.8 hypothetical protein compare
Atu4630 -0.5 -1.2 hypothetical protein compare
Atu0577 -0.5 -1.6 FLAF protein compare
Atu3423 -0.5 -1.1 hypothetical protein compare
Atu0152 -0.4 -0.9 hypothetical protein compare
Atu0361 -0.4 -0.9 transcriptional regulator compare
Atu2044 -0.4 -1.5 HFLC protein compare
Atu0690 -0.4 -0.7 hypothetical protein compare
Atu5441 -0.4 -2.1 ABC transporter substrate binding protein compare
Atu2124 -0.4 -2.3 transcriptional regulator, ArsR family compare
Atu4748 -0.4 -2.5 D-tagatose 3-epimerase compare
Atu2052 -0.4 -1.9 hypothetical protein compare
Atu0496 -0.4 -1.1 hypothetical protein compare
Atu1456 -0.4 -2.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1782 -0.4 -1.8 hypothetical protein compare
Atu5545 -0.4 -1.3 hypothetical protein compare
Atu1634 -0.4 -0.8 hypothetical protein compare
Atu5468 -0.4 -0.7 hypothetical protein compare
Atu2308 -0.4 -2.0 d-beta-hydroxybutyrate dehydrogenase compare
Atu3371 -0.4 -2.3 sugar ABC transporter ATPase compare
Atu4643 -0.4 -1.4 hypothetical protein compare
Atu5489 -0.4 -1.1 hypothetical protein compare
Atu1734 -0.4 -1.0 hypothetical protein compare
Atu1023 -0.4 -0.9 hypothetical protein compare
Atu0638 -0.4 -1.0 hypothetical protein compare
Atu8091 -0.4 -2.5 hypothetical protein compare
Atu5542 -0.4 -1.7 hypothetical protein compare
Atu5102 -0.4 -1.2 hypothetical protein compare
Atu0422 -0.4 -1.0 ABC transporter, membrane spanning protein compare
Atu2204 -0.4 -0.9 hypothetical protein compare
Atu4176 -0.4 -1.9 hypothetical protein compare
Atu4411 -0.4 -2.2 LysR family transcriptional regulator compare
Atu8183 -0.4 -2.1 hypothetical protein compare
Atu3740 -0.4 -2.3 fructose bisphosphate aldolase compare
Atu4702 -0.4 -1.9 GntR family transcriptional regulator compare
Atu0769 -0.4 -0.6 protoheme IX farnesyltransferase compare
Atu5014 -0.4 -1.3 plasmid stabilization protein compare
Atu5159 -0.4 -1.0 hypothetical protein compare
Atu3973 -0.4 -1.4 hypothetical protein compare
Atu1462 -0.4 -2.5 glycine cleavage system protein P2 compare
Atu5080 -0.4 -1.3 ABC transporter membrane spanning protein (sugar) compare
Atu0784 -0.4 -1.4 hypothetical protein compare
Atu0142 -0.4 -1.1 cytochrome o ubiquinol oxidase subunit II compare
Atu0999 -0.4 -2.1 magnesium transport protein compare
Atu3110 -0.4 -2.0 hypothetical protein compare
Atu1699 -0.4 -0.9 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu1439 -0.4 -0.5 hypothetical protein compare
Atu2033 -0.4 -1.7 hypothetical protein compare
Atu0322 -0.4 -1.8 enoyl CoA hydratase compare
Atu0562 -0.4 -1.1 flagellar motor switch protein FliN compare
Atu1503 -0.4 -0.5 hypothetical protein compare
Atu5448 -0.4 -1.8 hypothetical protein compare
Atu1032 -0.4 -1.5 hypothetical protein compare
Atu5099 -0.4 -2.3 hypothetical protein compare
Atu1527 -0.4 -1.4 nitrogen fixation protein FixS compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Carnitine Hydrochloride in Agrobacterium fabrum C58

For nitrogen source Carnitine Hydrochloride across organisms