Experiment set3IT013 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Ceftazidime hydrate 0.0005 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_12335 +2.0 12.2 pyridoxal phosphate-dependent aminotransferase compare
CA264_12405 +1.6 12.6 hypothetical protein compare
CA264_06600 +1.6 13.2 glycosyltransferase compare
CA264_19925 +1.6 9.2 peptidyl-prolyl cis-trans isomerase compare
CA264_15235 +1.6 12.3 hypothetical protein compare
CA264_03905 +1.5 7.2 polysaccharide deacetylase family protein compare
CA264_12400 +1.5 12.1 hypothetical protein compare
CA264_12365 +1.5 13.0 asparagine synthetase B compare
CA264_04300 +1.5 10.0 ABC transporter substrate-binding protein compare
CA264_17110 +1.5 9.8 radical SAM protein compare
CA264_12455 +1.5 11.1 hypothetical protein compare
CA264_03910 +1.4 10.3 family 2 glycosyl transferase compare
CA264_03890 +1.4 9.3 family 2 glycosyl transferase compare
CA264_04290 +1.4 10.2 ABC transporter permease compare
CA264_02415 +1.4 4.9 dethiobiotin synthase compare
CA264_14365 +1.4 5.3 radical SAM protein compare
CA264_04985 +1.4 10.3 hypothetical protein compare
CA264_12325 +1.4 11.0 polysaccharide biosynthesis protein compare
CA264_12355 +1.3 9.3 polysaccharide deacetylase compare
CA264_12370 +1.3 10.4 hypothetical protein compare
CA264_06345 +1.3 11.6 hypothetical protein compare
CA264_12350 +1.3 9.9 glycosyltransferase family 1 protein compare
CA264_04295 +1.3 10.3 hypothetical protein compare
CA264_01995 +1.3 10.1 SH3 domain-containing protein compare
CA264_14765 +1.2 9.8 hypothetical protein compare
CA264_06395 +1.2 9.1 DUF58 domain-containing protein compare
CA264_11010 +1.2 10.9 hypothetical protein compare
CA264_18080 +1.2 5.3 hypothetical protein compare
CA264_05250 +1.2 10.7 hypothetical protein compare
CA264_08005 +1.2 2.5 phosphonate ABC transporter ATP-binding protein compare
CA264_18665 +1.2 6.6 prenyltransferase compare
CA264_06095 +1.2 3.6 hypothetical protein compare
CA264_11800 +1.2 9.3 aerotolerance protein compare
CA264_20380 +1.2 9.2 lytic transglycosylase compare
CA264_12375 +1.1 7.7 hypothetical protein compare
CA264_01370 +1.1 10.5 hypothetical protein compare
CA264_18765 +1.1 8.7 ATPase compare
CA264_04305 +1.1 10.0 hypothetical protein compare
CA264_06400 +1.1 7.9 hypothetical protein compare
CA264_20650 +1.1 5.0 diviva domain containing protein compare
CA264_19730 +1.1 9.6 peptidylprolyl isomerase compare
CA264_11015 +1.1 7.6 hypothetical protein compare
CA264_06610 +1.1 3.1 iron-dependent repressor compare
CA264_21460 +1.1 1.7 hypothetical protein compare
CA264_19245 +1.1 7.8 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
CA264_04895 +1.1 6.9 peptidase M23 compare
CA264_17345 +1.1 6.0 ABC transporter ATP-binding protein compare
CA264_16760 +1.1 9.2 hypothetical protein compare
CA264_14480 +1.1 6.2 large-conductance mechanosensitive channel compare
CA264_06405 +1.1 8.9 VWA domain-containing protein compare
CA264_16335 +1.1 4.1 hypothetical protein compare
CA264_00285 +1.1 7.9 glycosyl transferase compare
CA264_12385 +1.1 7.8 glycosyl transferase compare
CA264_15255 +1.1 6.7 alpha/beta hydrolase compare
CA264_12345 +1.1 5.8 lipid carrier--UDP-N-acetylgalactosaminyltransferase compare
CA264_00660 +1.0 6.8 hypothetical protein compare
CA264_11795 +1.0 6.7 aerotolerance regulator BatB compare
CA264_12260 +1.0 7.7 hypothetical protein compare
CA264_16680 +1.0 8.0 hypothetical protein compare
CA264_18695 +1.0 7.4 glycogen synthase compare
CA264_04525 +1.0 6.9 DUF2279 domain-containing protein compare
CA264_17650 +1.0 4.7 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase compare
CA264_21445 +1.0 2.3 metal transporter compare
CA264_04285 +1.0 3.0 hypothetical protein compare
CA264_12390 +1.0 7.8 hypothetical protein compare
CA264_00275 +1.0 6.4 hypothetical protein compare
CA264_18860 +1.0 7.3 TIGR00374 family protein compare
CA264_08780 +0.9 7.0 hypothetical protein compare
CA264_00160 +0.9 8.2 hypothetical protein compare
CA264_19920 +0.9 6.3 alanine glycine permease compare
CA264_20615 +0.9 5.3 N-acetylmuramoyl-L-alanine amidase compare
CA264_17050 +0.9 8.8 hypothetical protein compare
CA264_04700 +0.9 7.8 cyanophycin synthetase compare
CA264_13430 +0.9 3.3 hypothetical protein compare
CA264_17845 +0.9 6.3 GNAT family N-acetyltransferase compare
CA264_17905 +0.9 5.5 UDP-glucose 4-epimerase GalE compare
CA264_10005 +0.9 2.0 hypothetical protein compare
CA264_08070 +0.9 4.8 gliding motility-associated ABC transporter substrate-binding protein GldG compare
CA264_14290 +0.9 4.7 glycosyl transferase family 2 compare
CA264_00280 +0.9 6.2 DegT/DnrJ/EryC1/StrS aminotransferase compare
CA264_01405 +0.9 6.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
CA264_15520 +0.9 3.9 hypothetical protein compare
CA264_14965 +0.9 6.0 glycosyltransferase WbuB compare
CA264_08320 +0.9 3.6 hypothetical protein compare
CA264_20560 +0.9 5.0 DNA repair ATPase compare
CA264_04655 +0.9 5.5 cell division protein compare
CA264_17925 +0.8 5.2 chromate transporter compare
CA264_13770 +0.8 2.5 DNA starvation/stationary phase protection protein compare
CA264_16415 +0.8 2.0 hypothetical protein compare
CA264_06450 +0.8 5.1 hypothetical protein compare
CA264_06030 +0.8 4.7 cell envelope biogenesis protein OmpA compare
CA264_19010 +0.8 7.4 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_19830 +0.8 5.2 hypothetical protein compare
CA264_19885 +0.8 4.7 uridine kinase compare
CA264_16370 +0.8 4.6 gliding motility lipoprotein GldK compare
CA264_16150 +0.8 1.5 acyl carrier protein compare
CA264_16360 +0.8 4.5 gliding motility protein GldM compare
CA264_05300 +0.8 5.1 hypothetical protein compare
CA264_13295 +0.8 5.1 rhomboid family intramembrane serine protease compare
CA264_16710 +0.8 2.6 transcriptional regulator compare
CA264_15010 +0.8 3.2 gliding motility lipoprotein GldD compare
CA264_03805 +0.8 5.3 serine protease compare
CA264_00235 +0.8 2.7 hypothetical protein compare
CA264_12435 +0.8 3.6 GlcNAc-PI de-N-acetylase compare
CA264_19135 +0.7 1.8 hypothetical protein compare
CA264_17790 +0.7 3.0 hypothetical protein compare
CA264_20120 +0.7 1.3 hypothetical protein compare
CA264_10955 +0.7 1.3 phenylacetate-CoA oxygenase subunit PaaJ compare
CA264_15970 +0.7 3.1 hypothetical protein compare
CA264_20845 +0.7 0.9 hypothetical protein compare
CA264_04765 +0.7 3.6 chromosome partitioning protein ParA compare
CA264_04835 +0.7 5.6 ABC transporter ATP-binding protein compare
CA264_10970 +0.7 4.5 ferredoxin compare
CA264_04770 +0.7 4.3 metal-dependent hydrolase compare
CA264_01065 +0.7 1.5 MarR family transcriptional regulator compare
CA264_17240 +0.7 3.5 hypothetical protein compare
CA264_01595 +0.7 3.1 hypothetical protein compare
CA264_09330 +0.7 1.7 cold-shock protein compare
CA264_18780 +0.7 3.8 hypothetical protein compare
CA264_19970 +0.7 2.4 hypothetical protein compare
CA264_20275 +0.7 3.1 DNA-binding protein compare
CA264_12075 +0.7 5.2 PAS domain S-box protein compare
CA264_05010 +0.7 5.2 hypothetical protein compare
CA264_01185 +0.7 3.4 hypothetical protein compare
CA264_19320 +0.7 0.9 hypothetical protein compare
CA264_03870 +0.7 2.7 transcription elongation factor GreA compare
CA264_15515 +0.7 3.2 peptidase compare
CA264_00040 +0.7 4.9 hypothetical protein compare
CA264_16330 +0.7 3.1 hypothetical protein compare
CA264_14515 +0.7 3.8 peptidase M23 compare
CA264_00915 +0.6 4.6 hypothetical protein compare
CA264_08080 +0.6 2.8 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
CA264_13405 +0.6 3.8 NAD-dependent dehydratase compare
CA264_12430 +0.6 4.3 nucleotidyltransferase compare
CA264_20945 +0.6 1.8 hypothetical protein compare
CA264_12465 +0.6 3.8 NAD-dependent dehydratase compare
CA264_04760 +0.6 3.6 chromosome partitioning protein ParB compare
CA264_20325 +0.6 3.1 cell envelope biogenesis protein OmpA compare
CA264_05175 +0.6 2.3 hypothetical protein compare
CA264_12415 +0.6 5.0 hypothetical protein compare
CA264_14395 +0.6 2.1 endonuclease III compare
CA264_02160 +0.6 4.1 hypothetical protein compare
CA264_00835 +0.6 2.4 hypothetical protein compare
CA264_11215 +0.6 3.0 N-acetyltransferase compare
CA264_08105 +0.6 2.7 NupC/NupG family nucleoside CNT transporter compare
CA264_12300 +0.6 1.7 RNase III inhibitor compare
CA264_13170 +0.6 2.7 hypothetical protein compare
CA264_13130 +0.6 2.9 peptidase S1 compare
CA264_19555 +0.6 3.3 GNAT family N-acetyltransferase compare
CA264_14510 +0.6 3.9 hypothetical protein compare
CA264_06605 +0.6 2.3 ketoacyl-ACP synthase III compare
CA264_18295 +0.6 4.2 iron-sulfur cluster-binding protein compare
CA264_20505 +0.6 2.2 hypothetical protein compare
CA264_09285 +0.6 2.6 anti-anti-sigma factor compare
CA264_17915 +0.6 1.8 LPS biosynthesis protein WbpP compare
CA264_12160 +0.6 1.4 transcriptional regulator compare
CA264_15965 +0.6 2.2 hypothetical protein compare
CA264_14315 +0.6 2.7 hypothetical protein compare
CA264_12285 +0.6 3.6 hypothetical protein compare
CA264_09185 +0.6 2.0 hypothetical protein compare
CA264_05930 +0.6 1.6 glyoxalase compare
CA264_20375 +0.6 2.2 hypothetical protein compare
CA264_15335 +0.6 5.2 SusC/RagA family TonB-linked outer membrane protein compare
CA264_17095 +0.6 1.1 FeoB-associated Cys-rich membrane protein compare
CA264_10920 +0.6 3.4 helix-turn-helix-type transcriptional regulator compare
CA264_20700 +0.6 3.7 hypothetical protein compare
CA264_20565 +0.6 3.4 hypothetical protein compare
CA264_20830 +0.6 2.8 hypothetical protein compare
CA264_00515 +0.6 3.7 hypothetical protein compare
CA264_11715 +0.6 2.0 hypothetical protein compare
CA264_16355 +0.6 2.2 gliding motility protein GldN compare
CA264_03950 +0.6 2.6 4-carboxymuconolactone decarboxylase compare
CA264_07335 +0.6 2.4 transcriptional regulator compare
CA264_02255 +0.6 2.4 hypothetical protein compare
CA264_10930 +0.5 1.3 methylglutaconyl-CoA hydratase compare
CA264_14300 +0.5 2.5 four helix bundle protein compare
CA264_07920 +0.5 4.0 response regulator compare
CA264_16440 +0.5 1.3 hypothetical protein compare
CA264_21120 +0.5 2.4 ZIP family zinc transporter compare
CA264_12965 +0.5 2.2 hypothetical protein compare
CA264_00420 +0.5 3.3 fructose-bisphosphatase class I compare
CA264_11135 +0.5 2.5 DUF2179 domain-containing protein compare
CA264_17800 +0.5 1.6 tRNA-Val compare
CA264_20330 +0.5 3.4 hypothetical protein compare
CA264_02220 +0.5 3.9 signal peptide peptidase SppA compare
CA264_21300 +0.5 0.9 hypothetical protein compare
CA264_15425 +0.5 1.4 DUF4834 domain-containing protein compare
CA264_03025 +0.5 3.5 T9SS C-terminal target domain-containing protein compare
CA264_08075 +0.5 1.7 gliding motility-associated ABC transporter permease subunit GldF compare
CA264_10255 +0.5 1.1 hypothetical protein compare
CA264_04905 +0.5 4.3 acetyl-CoA carboxylase biotin carboxylase subunit compare
CA264_12425 +0.5 2.6 CMP-N-acetylneuraminic acid synthetase compare
CA264_15650 +0.5 1.9 hypothetical protein compare
CA264_03270 +0.5 1.5 hypothetical protein compare
CA264_17560 +0.5 3.0 hypothetical protein compare
CA264_20080 +0.5 2.6 T9SS C-terminal target domain-containing protein compare
CA264_08140 +0.5 1.9 oxidoreductase compare
CA264_16175 +0.5 2.1 hypothetical protein compare
CA264_17875 +0.5 1.1 amino acid dehydrogenase compare
CA264_12270 +0.5 4.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pontibacter actiniarum KMM 6156, DSM 19842 in stress experiments

For stress Ceftazidime hydrate across organisms