Experiment set3IT012 for Pseudomonas simiae WCS417

Compare to:

L-Citrulline carbon source

200 most important genes:

  gene name fitness t score description  
PS417_27040 -6.4 -3.3 3-phosphoglycerate dehydrogenase compare
PS417_01575 -5.8 -7.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_25725 -5.7 -16.7 anthranilate synthase component I compare
PS417_08125 -5.6 -2.0 prephenate dehydratase compare
PS417_00185 -5.5 -6.2 tryptophan synthase subunit beta compare
PS417_07640 -5.5 -5.7 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_18560 -5.5 -8.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_27795 -5.2 -1.9 orotate phosphoribosyltransferase compare
PS417_01850 -5.1 -9.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_23995 -5.0 -1.8 preprotein translocase subunit SecG compare
PS417_02510 -4.9 -6.1 ATP phosphoribosyltransferase regulatory subunit compare
PS417_01855 -4.9 -5.7 phosphoribosyl-AMP cyclohydrolase compare
PS417_20985 -4.8 -5.7 porin compare
PS417_04415 -4.5 -10.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_18595 -4.5 -7.8 3-isopropylmalate dehydratase compare
PS417_16465 -4.4 -15.3 sirohydrochlorin ferrochelatase compare
PS417_25710 -4.3 -2.2 indole-3-glycerol-phosphate synthase compare
PS417_18585 -4.3 -10.6 3-isopropylmalate dehydrogenase compare
PS417_26995 -4.2 -14.3 phosphoserine phosphatase compare
PS417_04420 -4.2 -11.9 histidinol dehydrogenase compare
PS417_01580 -4.2 -2.0 imidazole glycerol phosphate synthase compare
PS417_25720 -4.1 -12.7 anthranilate synthase component II compare
PS417_18600 -4.1 -4.1 isopropylmalate isomerase compare
PS417_23805 -4.1 -10.1 acetolactate synthase 3 regulatory subunit compare
PS417_12855 -4.0 -7.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_01565 -4.0 -10.6 imidazole glycerol phosphate synthase compare
PS417_02415 -3.9 -7.7 phosphoserine phosphatase compare
PS417_08245 -3.9 -2.0 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_06375 -3.9 -2.0 deoxycytidine triphosphate deaminase compare
PS417_00180 -3.7 -6.0 tryptophan synthase subunit alpha compare
PS417_27835 -3.5 -12.4 endoribonuclease compare
PS417_25715 -3.5 -5.4 anthranilate phosphoribosyltransferase compare
PS417_01605 -3.5 -3.4 phosphoglycerate mutase compare
PS417_17580 -3.5 -4.9 citrulline utilization hydrolase (from data) conserved
PS417_12290 -3.5 -12.1 sulfite reductase compare
PS417_24155 -3.3 -4.8 ATP-binding protein compare
PS417_23900 -3.1 -11.6 poly(A) polymerase compare
PS417_23800 -2.9 -16.9 ketol-acid reductoisomerase compare
PS417_20125 -2.9 -5.1 phosphoribosylglycinamide formyltransferase compare
PS417_23810 -2.9 -15.9 acetolactate synthase 3 catalytic subunit compare
PS417_26040 -2.9 -5.7 malate synthase compare
PS417_02175 -2.7 -5.5 transcriptional regulator compare
PS417_21655 -2.5 -2.3 aspartate kinase compare
PS417_18530 -2.5 -11.6 O-succinylhomoserine sulfhydrylase compare
PS417_26740 -2.5 -10.6 homoserine acetyltransferase compare
PS417_01950 -2.5 -7.6 malate dehydrogenase compare
PS417_26745 -2.5 -11.2 methionine biosynthesis protein MetW compare
PS417_24710 -2.5 -6.2 lipoprotein compare
PS417_17585 -2.5 -9.7 ornithine cyclodeaminase conserved
PS417_18690 -2.4 -5.4 aromatic amino acid aminotransferase compare
PS417_23110 -2.4 -11.9 2-isopropylmalate synthase compare
PS417_08230 -2.3 -3.4 lipopolysaccharide biosynthesis protein RfbH compare
PS417_20160 -2.3 -4.2 cysteine synthase compare
PS417_23770 -2.2 -4.6 exodeoxyribonuclease V subunit alpha compare
PS417_26890 -2.2 -7.6 dihydroxy-acid dehydratase compare
PS417_27435 -2.1 -5.7 polyphosphate kinase compare
PS417_16570 -2.1 -11.1 isocitrate lyase compare
PS417_24835 -2.0 -7.8 hypothetical protein compare
PS417_21750 -1.9 -13.2 acetyl-CoA synthetase compare
PS417_08200 -1.8 -6.0 hypothetical protein compare
PS417_17565 -1.8 -5.3 branched-chain amino acid aminotransferase compare
PS417_08195 -1.8 -9.7 hypothetical protein compare
PS417_08225 -1.8 -5.5 acetolactate synthase compare
PS417_01210 -1.8 -9.1 hypothetical protein compare
PS417_08220 -1.8 -1.4 epimerase compare
PS417_21125 -1.7 -7.7 phosphoadenosine phosphosulfate reductase compare
PS417_04365 -1.7 -2.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_07170 -1.6 -3.9 hypothetical protein compare
PS417_02690 -1.6 -6.4 N-acylglucosamine 2-epimerase compare
PS417_27875 -1.5 -6.5 histidine kinase compare
PS417_08540 -1.5 -3.9 RNA helicase compare
PS417_26850 -1.5 -1.3 twin-arginine translocation pathway signal protein compare
PS417_02555 -1.5 -11.8 exoribonuclease R compare
PS417_17485 -1.4 -6.2 membrane protein compare
PS417_17240 -1.3 -5.5 trigger factor compare
PS417_01560 -1.3 -1.5 imidazoleglycerol-phosphate dehydratase compare
PS417_18590 -1.3 -1.9 SAM-dependent methyltransferase compare
PS417_22385 -1.3 -8.3 quinolinate synthase A compare
PS417_03925 -1.3 -5.7 nicotinate-nucleotide pyrophosphorylase compare
PS417_01570 -1.3 -1.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_22520 -1.3 -2.5 histidine kinase compare
PS417_27010 -1.3 -9.2 threonine dehydratase compare
PS417_28080 -1.3 -8.5 phosphate ABC transporter permease compare
PS417_23370 -1.2 -5.9 protoheme IX farnesyltransferase compare
PS417_20610 -1.2 -1.8 hypothetical protein compare
PS417_04270 -1.2 -7.6 ribonuclease G compare
PS417_28070 -1.2 -7.2 phosphate ABC transporter ATP-binding protein compare
PS417_26730 -1.2 -1.3 pyrroline-5-carboxylate reductase compare
PS417_23375 -1.2 -1.9 cytochrome C oxidase compare
PS417_21210 -1.2 -2.2 amidotransferase compare
PS417_21690 -1.2 -4.4 N-succinylarginine dihydrolase compare
PS417_24765 -1.2 -4.7 membrane protein compare
PS417_21430 -1.1 -3.2 3-oxoacyl-ACP synthase compare
PS417_07115 -1.1 -8.1 L-aspartate oxidase compare
PS417_08130 -1.1 -2.7 aspartate aminotransferase compare
PS417_17480 -1.1 -3.6 branched-chain amino acid ABC transporter substrate-binding protein compare
PS417_15780 -1.1 -2.5 membrane protein compare
PS417_08205 -1.1 -3.9 acetyltransferase compare
PS417_26985 -1.1 -4.5 phosphoenolpyruvate-protein phosphotransferase compare
PS417_23950 -1.1 -3.4 polynucleotide phosphorylase/polyadenylase compare
PS417_08105 -1.1 -7.4 N-ethylammeline chlorohydrolase compare
PS417_27305 -1.1 -6.5 5-formyltetrahydrofolate cyclo-ligase compare
PS417_08155 -1.1 -2.1 integration host factor subunit beta compare
PS417_27135 -1.0 -1.2 glutamine synthetase compare
PS417_22450 -1.0 -1.6 ATP-dependent DNA helicase RuvA compare
PS417_09210 -1.0 -2.4 TetR family transcriptional regulator compare
PS417_27585 -1.0 -2.1 diaminopimelate epimerase compare
PS417_17455 -1.0 -2.6 cytochrome C compare
PS417_25930 -1.0 -5.0 pyrroloquinoline quinone biosynthesis protein PqqC compare
PS417_05165 -1.0 -2.8 cytosol aminopeptidase compare
PS417_20665 -1.0 -3.8 hypothetical protein compare
PS417_23380 -1.0 -2.1 cytochrome o ubiquinol oxidase subunit III compare
PS417_23390 -1.0 -5.7 ubiquinol oxidase subunit II compare
PS417_05850 -1.0 -2.5 LysR family transcriptional regulator compare
PS417_12310 -1.0 -6.6 methionine synthase compare
PS417_08580 -0.9 -5.7 histidine kinase compare
PS417_06200 -0.9 -2.3 protein-PII uridylyltransferase compare
PS417_24615 -0.9 -1.3 hypothetical protein compare
PS417_17495 -0.9 -3.7 multidrug ABC transporter permease compare
PS417_27005 -0.9 -1.2 membrane protein compare
PS417_24525 -0.9 -2.6 nuclease compare
PS417_11845 -0.9 -3.5 RpiR family transcriptional regulator compare
PS417_03705 -0.9 -1.4 2-alkenal reductase compare
PS417_15470 -0.9 -4.1 saccharopine dehydrogenase compare
PS417_17450 -0.9 -3.3 amino acid ABC transporter substrate-binding protein compare
PS417_20025 -0.9 -1.5 alpha-ribazole phosphatase compare
PS417_23385 -0.9 -6.2 cytochrome o ubiquinol oxidase subunit I compare
PS417_04875 -0.9 -1.7 molybdenum cofactor biosynthesis protein MoaE compare
PS417_24805 -0.9 -5.8 Fis family transcriptional regulator compare
PS417_06530 -0.9 -1.9 membrane protein compare
PS417_15465 -0.9 -2.6 carboxynorspermidine decarboxylase compare
PS417_18425 -0.8 -0.9 sporulation protein compare
PS417_06645 -0.8 -5.1 RNA polymerase-associated protein RapA compare
PS417_10405 -0.8 -1.3 filamentous hemagglutinin compare
PS417_11825 -0.8 -1.9 transcriptional regulator compare
PS417_24810 -0.8 -5.6 aldehyde dehydrogenase compare
PS417_01915 -0.8 -1.1 ATP-dependent protease ATP-binding subunit HslU compare
PS417_11400 -0.8 -1.4 phosphoglycerate mutase compare
PS417_27940 -0.8 -1.4 type VI secretion protein compare
PS417_13490 -0.8 -1.7 hypothetical protein compare
PS417_21120 -0.8 -2.7 phosphoserine phosphatase compare
PS417_28220 -0.8 -1.6 LysR family transcriptional regulator compare
PS417_21680 -0.8 -1.4 succinylglutamate desuccinylase compare
PS417_05695 -0.8 -4.5 transcriptional regulator compare
PS417_21710 -0.8 -2.4 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
PS417_17435 -0.8 -4.9 dehydrogenase compare
PS417_25940 -0.8 -4.2 pyrroloquinoline quinone biosynthesis protein PqqE compare
PS417_08135 -0.8 -4.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_17645 -0.8 -1.2 RND transporter compare
PS417_10480 -0.8 -1.5 glutathione S-transferase compare
PS417_03560 -0.8 -1.4 GTP-binding protein compare
PS417_21090 -0.8 -2.5 hypothetical protein compare
PS417_27610 -0.8 -4.0 hypothetical protein compare
PS417_21320 -0.8 -2.6 transcriptional regulator compare
PS417_11705 -0.8 -4.5 cyclic peptide transporter compare
PS417_25920 -0.8 -5.0 pyrroloquinoline quinone biosynthesis protein PqqF compare
PS417_17490 -0.8 -1.1 ABC transporter ATP-binding protein compare
PS417_04410 -0.8 -1.0 hypothetical protein compare
PS417_19965 -0.8 -5.4 histidine kinase compare
PS417_00825 -0.8 -1.6 recombinase RecF compare
PS417_11405 -0.8 -3.4 precorrin 6A synthase compare
PS417_15225 -0.8 -3.6 alpha/beta hydrolase compare
PS417_05840 -0.8 -1.9 LuxR family transcriptional regulator compare
PS417_28075 -0.7 -3.8 phosphate ABC transporter permease compare
PS417_13165 -0.7 -1.8 peroxidase compare
PS417_02805 -0.7 -1.0 urease subunit gamma compare
PS417_00510 -0.7 -1.0 membrane protein compare
PS417_07945 -0.7 -2.7 hypothetical protein compare
PS417_23475 -0.7 -1.4 hypothetical protein compare
PS417_21700 -0.7 -2.6 arginine N-succinyltransferase compare
PS417_05570 -0.7 -4.6 DeoR faimly transcriptional regulator compare
PS417_27035 -0.7 -2.7 FAD-linked oxidase compare
PS417_26510 -0.7 -4.9 5,10-methylenetetrahydrofolate reductase compare
PS417_10120 -0.7 -3.2 hypothetical protein compare
PS417_21085 -0.7 -3.2 GntR family transcriptional regulator compare
PS417_23095 -0.7 -1.0 exodeoxyribonuclease compare
PS417_27605 -0.7 -2.8 hypothetical protein compare
PS417_09010 -0.7 -1.6 phosphohistidine phosphatase compare
PS417_08430 -0.7 -2.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
PS417_19285 -0.7 -1.5 ankyrin compare
PS417_25280 -0.7 -3.0 methyltransferase compare
PS417_19600 -0.7 -1.1 exonuclease compare
PS417_18440 -0.7 -3.5 hypothetical protein compare
PS417_20140 -0.7 -2.5 nucleoprotein/polynucleotide-associated enzyme compare
PS417_01710 -0.7 -3.1 histidine utilization repressor compare
PS417_07620 -0.7 -1.8 beta-hexosaminidase compare
PS417_04180 -0.7 -1.8 GntR family transcriptional regulator compare
PS417_22210 -0.7 -1.7 AraC family transcriptional regulator compare
PS417_06245 -0.7 -2.0 zinc metallopeptidase RseP compare
PS417_00085 -0.7 -1.3 16S rRNA methyltransferase compare
PS417_10100 -0.7 -2.6 hypothetical protein compare
PS417_18025 -0.7 -1.7 cytochrome C compare
PS417_22115 -0.7 -1.8 transcriptional regulator compare
PS417_28225 -0.7 -1.3 hypothetical protein compare
PS417_00295 -0.7 -2.9 hypothetical protein compare
PS417_12755 -0.6 -2.5 RND transporter compare
PS417_15725 -0.6 -1.9 nitrate/nitrite transporter NarK compare
PS417_22445 -0.6 -2.8 ATP-dependent DNA helicase RuvB compare
PS417_01145 -0.6 -0.9 taurine transporter ATP-binding subunit compare
PS417_08420 -0.6 -2.2 lipoprotein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source L-Citrulline in Pseudomonas simiae WCS417

For carbon source L-Citrulline across organisms