Experiment set3IT006 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with MreB Perturbing Compound A22 0.04 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_08105 +3.1 19.8 NupC/NupG family nucleoside CNT transporter compare
CA264_06475 +3.0 3.9 hypothetical protein compare
CA264_07150 +2.7 14.5 elongation factor 4 compare
CA264_01265 +2.5 6.8 50S ribosomal protein L9 compare
CA264_07800 +2.4 13.9 hypothetical protein compare
CA264_18930 +2.3 14.6 RNA helicase compare
CA264_04820 +2.2 14.9 deoxyhypusine synthase compare
CA264_19885 +2.1 14.9 uridine kinase compare
CA264_03845 +1.9 13.5 peptidase M17 compare
CA264_06470 +1.9 5.1 YfcE family phosphodiesterase compare
CA264_11830 +1.9 10.6 acetyl-CoA acetyltransferase compare
CA264_07495 +1.9 5.4 GTP-binding protein YchF compare
CA264_13470 +1.9 3.5 cysteine synthase A compare
CA264_17510 +1.9 9.7 pseudouridylate synthase compare
CA264_12490 +1.9 12.6 phosphohydrolase compare
CA264_04350 +1.9 10.8 alanine dehydrogenase compare
CA264_20570 +1.8 5.8 inorganic pyrophosphatase compare
CA264_05910 +1.8 6.7 RNA helicase compare
CA264_04835 +1.7 14.1 ABC transporter ATP-binding protein compare
CA264_19005 +1.7 14.3 SusC/RagA family TonB-linked outer membrane protein compare
CA264_11200 +1.7 9.4 RNA degradosome polyphosphate kinase compare
CA264_20580 +1.7 6.6 tRNA (guanine(37)-N(1))-methyltransferase compare
CA264_05240 +1.6 12.0 glycerol acyltransferase compare
CA264_10305 +1.6 2.6 hypothetical protein compare
CA264_17495 +1.6 7.2 hypothetical protein compare
CA264_01260 +1.6 8.8 hypothetical protein compare
CA264_06410 +1.6 9.5 YggS family pyridoxal phosphate enzyme compare
CA264_06260 +1.5 6.4 N-acetyltransferase compare
CA264_08820 +1.5 12.3 histidine phosphatase family protein compare
CA264_17080 +1.5 8.7 rRNA (cytidine-2'-O-)-methyltransferase compare
CA264_09340 +1.5 10.2 hypothetical protein compare
CA264_14195 +1.5 11.4 1-pyrroline-5-carboxylate dehydrogenase compare
CA264_06590 +1.5 9.1 3-hydroxybutyryl-CoA dehydrogenase compare
CA264_15055 +1.5 6.6 MarR family transcriptional regulator compare
CA264_18120 +1.5 10.9 ABC transporter compare
CA264_15745 +1.4 1.8 tRNA-Arg compare
CA264_05855 +1.4 6.4 hypothetical protein compare
CA264_14805 +1.4 5.0 DNA-binding protein compare
CA264_06465 +1.4 8.6 orotate phosphoribosyltransferase compare
CA264_14475 +1.4 8.0 hypothetical protein compare
CA264_14920 +1.4 10.1 hypothetical protein compare
CA264_20095 +1.4 4.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
CA264_13170 +1.4 6.3 hypothetical protein compare
CA264_15650 +1.4 6.1 hypothetical protein compare
CA264_14480 +1.4 9.1 large-conductance mechanosensitive channel compare
CA264_07790 +1.4 9.9 ankryin compare
CA264_20715 +1.4 7.3 metallophosphatase compare
CA264_00190 +1.3 9.2 RagB/SusD family nutrient uptake outer membrane protein compare
CA264_11620 +1.3 9.1 hypothetical protein compare
CA264_12325 +1.3 10.5 polysaccharide biosynthesis protein compare
CA264_08670 +1.3 6.6 hypothetical protein compare
CA264_08140 +1.3 5.5 oxidoreductase compare
CA264_05395 +1.3 7.9 MmcQ-like protein compare
CA264_05575 +1.3 8.9 hypothetical protein compare
CA264_17925 +1.3 8.8 chromate transporter compare
CA264_08120 +1.3 8.3 electron transfer flavoprotein subunit alpha compare
CA264_05070 +1.3 8.3 indole-3-glycerol phosphate synthase compare
CA264_05360 +1.2 7.5 ABC transporter compare
CA264_14420 +1.2 4.5 hypothetical protein compare
CA264_00335 +1.2 5.9 dicarboxylate/amino acid:cation symporter compare
CA264_11810 +1.2 5.1 HAD family hydrolase compare
CA264_15710 +1.2 9.2 hypothetical protein compare
CA264_10965 +1.2 7.9 oligoendopeptidase F compare
CA264_01990 +1.2 3.3 tRNA-Lys compare
CA264_15330 +1.2 7.5 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_15005 +1.2 6.7 magnesium/cobalt efflux protein compare
CA264_11940 +1.2 9.5 peptidase M23 compare
CA264_15950 +1.2 4.7 hypothetical protein compare
CA264_12190 +1.2 5.6 hypothetical protein compare
CA264_03950 +1.2 2.5 4-carboxymuconolactone decarboxylase compare
CA264_02715 +1.1 2.9 UDP-glucose--dolichyl-phosphate glucosyltransferase compare
CA264_05700 +1.1 7.5 RNA methyltransferase compare
CA264_00925 +1.1 6.4 hypothetical protein compare
CA264_05635 +1.1 7.3 efflux transporter periplasmic adaptor subunit compare
CA264_16765 +1.1 7.9 coproporphyrinogen III oxidase compare
CA264_08690 +1.1 7.5 dipeptide epimerase compare
CA264_15715 +1.1 7.1 GTPase HflX compare
CA264_08115 +1.1 6.1 electron transfer flavoprotein subunit alpha compare
CA264_04970 +1.1 7.5 tRNA (guanine(46)-N(7))-methyltransferase compare
CA264_00920 +1.1 6.4 acetyltransferase compare
CA264_01950 +1.1 7.0 PhoH family protein compare
CA264_01935 +1.1 5.9 DNA-binding response regulator compare
CA264_18855 +1.1 4.3 chromosome segregation protein ScpA compare
CA264_03360 +1.1 9.1 hypothetical protein compare
CA264_14125 +1.1 5.6 endonuclease V compare
CA264_00145 +1.1 6.9 DNA mismatch repair protein MutT compare
CA264_04345 +1.1 7.4 CAAX protease family protein compare
CA264_05150 +1.1 6.7 response regulator compare
CA264_07165 +1.1 2.4 hypothetical protein compare
CA264_00165 +1.1 4.5 macrolide ABC transporter ATP-binding protein compare
CA264_05590 +1.1 3.6 hypothetical protein compare
CA264_00010 +1.1 6.0 hypothetical protein compare
CA264_14690 +1.1 5.7 peptidase S41 compare
CA264_03100 +1.1 8.0 Xaa-Pro aminopeptidase compare
CA264_03915 +1.1 5.0 hydrolase TatD compare
CA264_13385 +1.1 6.7 hypoxanthine phosphoribosyltransferase compare
CA264_15680 +1.1 5.1 hypothetical protein compare
CA264_04725 +1.0 6.6 Co2+/Mg2+ efflux protein ApaG compare
CA264_05370 +1.0 7.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB compare
CA264_15360 +1.0 6.8 permease compare
CA264_15840 +1.0 4.9 hypothetical protein compare
CA264_12070 +1.0 4.6 tRNA dimethylallyltransferase compare
CA264_00430 +1.0 5.2 hypothetical protein compare
CA264_05815 +1.0 2.7 hypothetical protein compare
CA264_02255 +1.0 5.3 hypothetical protein compare
CA264_19750 +1.0 6.1 IMP dehydrogenase compare
CA264_20000 +1.0 2.0 cold-shock protein compare
CA264_13300 +1.0 6.8 rhomboid family intramembrane serine protease compare
CA264_17680 +1.0 4.5 CoB--CoM heterodisulfide reductase compare
CA264_01670 +1.0 7.0 ABC transporter compare
CA264_20710 +1.0 5.5 hypothetical protein compare
CA264_14135 +1.0 5.3 ATP-dependent chaperone ClpB compare
CA264_19320 +1.0 1.3 hypothetical protein compare
CA264_21550 +1.0 6.7 hypothetical protein compare
CA264_03850 +1.0 3.6 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase compare
CA264_14375 +1.0 5.0 hypothetical protein compare
CA264_01155 +1.0 3.1 Zn-dependent protease compare
CA264_07405 +1.0 6.8 hypothetical protein compare
CA264_01145 +1.0 5.4 dienelactone hydrolase compare
CA264_06925 +1.0 3.0 acetolactate synthase small subunit compare
CA264_14350 +1.0 5.7 hemolysin compare
CA264_00325 +1.0 3.6 hypothetical protein compare
CA264_17675 +1.0 6.9 Fe-S oxidoreductase compare
CA264_16415 +0.9 2.2 hypothetical protein compare
CA264_15960 +0.9 6.9 hypothetical protein compare
CA264_10000 +0.9 4.0 DNA repair protein compare
CA264_07340 +0.9 3.2 hypothetical protein compare
CA264_11155 +0.9 6.4 malto-oligosyltrehalose trehalohydrolase compare
CA264_20060 +0.9 1.2 ribosome silencing factor RsfS compare
CA264_15965 +0.9 5.0 hypothetical protein compare
CA264_00455 +0.9 5.1 PorT-like protein compare
CA264_11955 +0.9 6.1 VWA domain-containing protein compare
CA264_00140 +0.9 4.0 hypothetical protein compare
CA264_18525 +0.9 4.8 hypothetical protein compare
CA264_11890 +0.9 2.3 NADH oxidase compare
CA264_14850 +0.9 6.6 hypothetical protein compare
CA264_09150 +0.9 3.8 Crp/Fnr family transcriptional regulator compare
CA264_19195 +0.9 7.2 hypothetical protein compare
CA264_05795 +0.9 3.6 hypothetical protein compare
CA264_19600 +0.9 3.7 aldehyde dehydrogenase family protein compare
CA264_15325 +0.9 5.5 hypothetical protein compare
CA264_01490 +0.9 6.0 DUF4199 domain-containing protein compare
CA264_05280 +0.9 5.2 hypothetical protein compare
CA264_00675 +0.9 5.2 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
CA264_15520 +0.9 5.0 hypothetical protein compare
CA264_14515 +0.9 4.8 peptidase M23 compare
CA264_19590 +0.9 3.2 heat-shock protein Hsp20 compare
CA264_06285 +0.9 2.6 N-acetyltransferase compare
CA264_11920 +0.9 5.9 DNA polymerase III subunit epsilon compare
CA264_08870 +0.9 3.3 imidazolonepropionase compare
CA264_05640 +0.8 5.5 transporter compare
CA264_16980 +0.8 3.0 thiol reductase thioredoxin compare
CA264_20440 +0.8 1.9 thiamine biosynthesis protein ThiS compare
CA264_08305 +0.8 2.8 OsmC family peroxiredoxin compare
CA264_15670 +0.8 1.8 DUF4295 domain-containing protein compare
CA264_16000 +0.8 4.5 fatty acid hydroxylase compare
CA264_18250 +0.8 2.1 NADH-quinone oxidoreductase subunit B compare
CA264_10575 +0.8 1.1 hypothetical protein compare
CA264_20565 +0.8 4.8 hypothetical protein compare
CA264_19045 +0.8 3.3 acyl-CoA dehydrogenase compare
CA264_03125 +0.8 5.2 oxygen-independent coproporphyrinogen III oxidase compare
CA264_15750 +0.8 4.6 hypothetical protein compare
CA264_17950 +0.8 4.5 hypothetical protein compare
CA264_07735 +0.8 2.0 hypothetical protein compare
CA264_17590 +0.8 3.9 RidA family protein compare
CA264_14380 +0.8 6.4 aminobenzoyl-glutamate transporter compare
CA264_00420 +0.8 5.9 fructose-bisphosphatase class I compare
CA264_14470 +0.8 4.3 hypothetical protein compare
CA264_21570 +0.8 4.5 hypothetical protein compare
CA264_08025 +0.8 6.3 GMP synthase (glutamine-hydrolyzing) compare
CA264_20915 +0.8 4.3 DNA repair protein compare
CA264_11895 +0.8 4.7 T9SS C-terminal target domain-containing protein compare
CA264_02260 +0.8 5.3 hypothetical protein compare
CA264_15790 +0.8 4.3 hypothetical protein compare
CA264_19010 +0.8 6.7 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_16070 +0.8 4.3 hypothetical protein compare
CA264_15590 +0.8 1.7 metal-dependent hydrolase compare
CA264_20540 +0.8 6.4 transglycosylase compare
CA264_15970 +0.8 2.7 hypothetical protein compare
CA264_17575 +0.8 2.9 hypothetical protein compare
CA264_08040 +0.8 2.7 dCTP deaminase compare
CA264_00135 +0.8 2.9 transcriptional regulator compare
CA264_17310 +0.8 5.2 hypothetical protein compare
CA264_08975 +0.8 4.1 hypothetical protein compare
CA264_20980 +0.8 2.7 conjugal transfer protein compare
CA264_02270 +0.8 5.9 efflux transporter periplasmic adaptor subunit compare
CA264_07785 +0.8 4.5 hypothetical protein compare
CA264_06220 +0.8 4.0 hypothetical protein compare
CA264_11065 +0.8 4.5 hypothetical protein compare
CA264_17320 +0.8 6.4 hypothetical protein compare
CA264_01865 +0.8 1.8 polyisoprenoid-binding protein compare
CA264_09220 +0.8 2.9 ferredoxin compare
CA264_14315 +0.8 3.5 hypothetical protein compare
CA264_12870 +0.8 4.1 deoxynucleoside kinase compare
CA264_08125 +0.8 4.3 tetratricopeptide repeat protein compare
CA264_17355 +0.8 3.5 ribonuclease R compare
CA264_07570 +0.8 3.2 hypothetical protein compare
CA264_19490 +0.8 5.0 carbamoyl phosphate synthase small subunit compare
CA264_18540 +0.8 3.8 RNA methyltransferase compare
CA264_00355 +0.7 4.3 short-chain dehydrogenase compare


Specific Phenotypes

For 65 genes in this experiment

For stress MreB Perturbing Compound A22 in Pontibacter actiniarum KMM 6156, DSM 19842

For stress MreB Perturbing Compound A22 across organisms