Experiment set3IT003 for Pseudomonas simiae WCS417

Compare to:

L-Glutamine carbon source

200 most important genes:

  gene name fitness t score description  
PS417_01855 -7.6 -4.7 phosphoribosyl-AMP cyclohydrolase compare
PS417_01575 -7.4 -6.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_25725 -6.4 -21.3 anthranilate synthase component I compare
PS417_27040 -6.3 -3.4 3-phosphoglycerate dehydrogenase compare
PS417_23805 -6.3 -7.5 acetolactate synthase 3 regulatory subunit compare
PS417_04415 -5.8 -11.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_16465 -5.8 -11.7 sirohydrochlorin ferrochelatase compare
PS417_18585 -5.7 -7.8 3-isopropylmalate dehydrogenase compare
PS417_18560 -5.5 -9.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_01850 -5.4 -11.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_08125 -5.4 -2.1 prephenate dehydratase compare
PS417_26995 -5.3 -14.0 phosphoserine phosphatase compare
PS417_27795 -5.2 -2.0 orotate phosphoribosyltransferase compare
PS417_23800 -5.2 -15.0 ketol-acid reductoisomerase compare
PS417_18595 -5.1 -6.9 3-isopropylmalate dehydratase compare
PS417_26740 -5.0 -8.3 homoserine acetyltransferase compare
PS417_04420 -5.0 -11.2 histidinol dehydrogenase compare
PS417_06375 -4.9 -1.9 deoxycytidine triphosphate deaminase compare
PS417_25720 -4.9 -9.8 anthranilate synthase component II compare
PS417_01565 -4.8 -5.6 imidazole glycerol phosphate synthase compare
PS417_02510 -4.8 -4.6 ATP phosphoribosyltransferase regulatory subunit compare
PS417_25715 -4.7 -7.9 anthranilate phosphoribosyltransferase compare
PS417_18530 -4.6 -6.7 O-succinylhomoserine sulfhydrylase compare
PS417_00185 -4.5 -6.8 tryptophan synthase subunit beta compare
PS417_27835 -4.4 -8.5 endoribonuclease compare
PS417_27195 -4.4 -2.3 N-acetylglutamate synthase compare
PS417_25710 -4.2 -2.3 indole-3-glycerol-phosphate synthase compare
PS417_18600 -4.2 -4.0 isopropylmalate isomerase compare
PS417_23810 -4.2 -11.7 acetolactate synthase 3 catalytic subunit compare
PS417_12290 -4.1 -8.3 sulfite reductase compare
PS417_23545 -4.0 -3.1 gamma-glutamyl kinase compare
PS417_24745 -4.0 -4.1 gamma-glutamyl phosphate reductase compare
PS417_12855 -3.8 -6.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_05595 -3.8 -8.1 ornithine carbamoyltransferase compare
PS417_26730 -3.8 -2.0 pyrroline-5-carboxylate reductase compare
PS417_01580 -3.7 -2.7 imidazole glycerol phosphate synthase compare
PS417_26745 -3.5 -5.6 methionine biosynthesis protein MetW compare
PS417_02415 -3.5 -5.2 phosphoserine phosphatase compare
PS417_00180 -3.5 -4.0 tryptophan synthase subunit alpha compare
PS417_26890 -3.3 -5.6 dihydroxy-acid dehydratase compare
PS417_01950 -3.2 -7.5 malate dehydrogenase compare
PS417_23110 -3.2 -6.8 2-isopropylmalate synthase compare
PS417_20160 -3.0 -3.7 cysteine synthase compare
PS417_07640 -2.9 -4.4 glyceraldehyde-3-phosphate dehydrogenase compare
PS417_23995 -2.8 -1.8 preprotein translocase subunit SecG compare
PS417_20125 -2.4 -3.6 phosphoribosylglycinamide formyltransferase compare
PS417_01560 -2.4 -2.9 imidazoleglycerol-phosphate dehydratase compare
PS417_20985 -2.4 -4.8 porin compare
PS417_01605 -2.1 -1.8 phosphoglycerate mutase compare
PS417_04365 -1.9 -2.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_19425 -1.8 -1.5 allantoicase compare
PS417_23775 -1.7 -3.7 exodeoxyribonuclease V subunit beta compare
PS417_26695 -1.7 -1.9 uracil phosphoribosyltransferase compare
PS417_23915 -1.6 -5.0 pantoate--beta-alanine ligase compare
PS417_24155 -1.5 -2.2 ATP-binding protein compare
PS417_08220 -1.4 -1.2 epimerase compare
PS417_05455 -1.4 -6.9 XRE family transcriptional regulator compare
PS417_01210 -1.4 -8.1 hypothetical protein compare
PS417_23770 -1.3 -3.1 exodeoxyribonuclease V subunit alpha compare
PS417_12730 -1.3 -1.9 glycosyltransferase compare
PS417_21020 -1.3 -9.1 phosphoenolpyruvate synthase conserved
PS417_16555 -1.3 -2.2 cupin compare
PS417_15135 -1.2 -1.5 hypothetical protein compare
PS417_18990 -1.2 -3.0 membrane protein compare
PS417_18105 -1.2 -1.7 iron-dicitrate transporter substrate-binding subunit compare
PS417_08230 -1.2 -1.4 lipopolysaccharide biosynthesis protein RfbH compare
PS417_22570 -1.2 -1.3 H-NS histone compare
PS417_06530 -1.1 -3.4 membrane protein compare
PS417_01570 -1.1 -0.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_21210 -1.1 -2.7 amidotransferase compare
PS417_07940 -1.1 -2.8 hypothetical protein compare
PS417_02975 -1.0 -3.5 3-dehydroquinate dehydratase compare
PS417_12735 -1.0 -1.9 peroxidase compare
PS417_08200 -1.0 -3.5 hypothetical protein compare
PS417_03260 -1.0 -2.6 5S ribosomal RNA compare
PS417_20855 -1.0 -1.7 hypothetical protein compare
PS417_27300 -0.9 -0.9 cell division protein ZapA compare
PS417_16255 -0.9 -2.2 RNA polymerase sigma factor compare
PS417_23950 -0.9 -3.3 polynucleotide phosphorylase/polyadenylase compare
PS417_22445 -0.9 -2.9 ATP-dependent DNA helicase RuvB compare
PS417_12535 -0.9 -1.4 nitrilase compare
PS417_23390 -0.9 -5.2 ubiquinol oxidase subunit II compare
PS417_05850 -0.9 -2.2 LysR family transcriptional regulator compare
PS417_23475 -0.9 -1.6 hypothetical protein compare
PS417_05065 -0.9 -1.5 hypothetical protein compare
PS417_20610 -0.8 -1.1 hypothetical protein compare
PS417_22565 -0.8 -1.3 formyltetrahydrofolate deformylase compare
PS417_05905 -0.8 -1.6 hypothetical protein compare
PS417_08045 -0.8 -1.8 uracil permease compare
PS417_12375 -0.8 -1.8 serine/threonine protein phosphatase compare
PS417_05165 -0.8 -2.2 cytosol aminopeptidase compare
PS417_27490 -0.8 -1.8 hypothetical protein compare
PS417_23095 -0.8 -1.1 exodeoxyribonuclease compare
PS417_20040 -0.8 -4.0 cobyric acid synthase compare
PS417_02555 -0.8 -6.3 exoribonuclease R compare
PS417_08155 -0.8 -2.2 integration host factor subunit beta compare
PS417_26470 -0.8 -1.6 cytochrome C compare
PS417_02560 -0.8 -1.8 23S rRNA methyltransferase compare
PS417_21630 -0.8 -2.1 magnesium transporter compare
PS417_24835 -0.8 -2.9 hypothetical protein compare
PS417_27435 -0.8 -3.6 polyphosphate kinase compare
PS417_22210 -0.8 -1.9 AraC family transcriptional regulator compare
PS417_00375 -0.8 -2.3 membrane protein compare
PS417_13755 -0.8 -2.2 oxidoreductase compare
PS417_09245 -0.7 -1.5 recombinase RdgC compare
PS417_14590 -0.7 -1.4 LysR family transcriptional regulator compare
PS417_25985 -0.7 -1.8 dethiobiotin synthetase compare
PS417_24500 -0.7 -1.9 DEAD/DEAH box helicase compare
PS417_23490 -0.7 -0.9 dihydrofolate reductase compare
PS417_13145 -0.7 -2.3 50S ribosomal protein L21 compare
PS417_05100 -0.7 -1.9 RNA polymerase sigma factor compare
PS417_09160 -0.7 -2.1 GNAT family acetyltransferase compare
PS417_24115 -0.7 -1.3 hypothetical protein compare
PS417_22270 -0.7 -1.8 hypothetical protein compare
PS417_14015 -0.7 -2.6 LysR family transcriptional regulator compare
PS417_19605 -0.7 -1.1 hypothetical protein compare
PS417_08195 -0.7 -4.7 hypothetical protein compare
PS417_04410 -0.7 -0.9 hypothetical protein compare
PS417_22945 -0.7 -1.2 phosphoribosylglycinamide formyltransferase compare
PS417_00565 -0.7 -2.6 NAD(P) transhydrogenase compare
PS417_23370 -0.7 -2.4 protoheme IX farnesyltransferase compare
PS417_22060 -0.7 -1.4 hypothetical protein compare
PS417_02980 -0.7 -1.3 chemotaxis protein compare
PS417_04180 -0.7 -2.4 GntR family transcriptional regulator compare
PS417_07950 -0.7 -1.8 MFS transporter compare
PS417_18690 -0.7 -2.3 aromatic amino acid aminotransferase compare
PS417_04080 -0.7 -2.0 peptide ABC transporter substrate-binding protein compare
PS417_15480 -0.7 -1.1 ABC transporter substrate-binding protein compare
PS417_27865 -0.7 -2.2 LysR family transcriptional regulator compare
PS417_11825 -0.7 -1.7 transcriptional regulator compare
PS417_02225 -0.7 -2.4 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_16275 -0.7 -1.7 hypothetical protein compare
PS417_10425 -0.7 -1.1 hypothetical protein compare
PS417_00825 -0.6 -1.7 recombinase RecF compare
PS417_04905 -0.6 -3.3 amino acid ABC transporter permease compare
PS417_24310 -0.6 -1.6 ankyrin compare
PS417_10100 -0.6 -2.7 hypothetical protein compare
PS417_19095 -0.6 -1.0 hypothetical protein compare
PS417_22450 -0.6 -1.0 ATP-dependent DNA helicase RuvA compare
PS417_26900 -0.6 -1.2 L-cystine transporter tcyP compare
PS417_15510 -0.6 -1.4 hypothetical protein compare
PS417_21430 -0.6 -1.8 3-oxoacyl-ACP synthase compare
PS417_27870 -0.6 -2.3 ATP-dependent DNA helicase RecG compare
PS417_15780 -0.6 -1.7 membrane protein compare
PS417_13855 -0.6 -0.9 acetyl-CoA acetyltransferase compare
PS417_19630 -0.6 -1.9 LuxR family transcriptional regulator compare
PS417_03925 -0.6 -2.6 nicotinate-nucleotide pyrophosphorylase compare
PS417_18040 -0.6 -1.1 general secretion pathway protein GspN compare
PS417_06040 -0.6 -1.5 hypothetical protein compare
PS417_14070 -0.6 -0.8 hypothetical protein compare
PS417_21510 -0.6 -0.8 histidine kinase compare
PS417_09210 -0.6 -1.3 TetR family transcriptional regulator compare
PS417_02895 -0.6 -0.8 precorrin-6Y C5,15-methyltransferase compare
PS417_08925 -0.6 -1.5 membrane protein compare
PS417_28145 -0.6 -1.5 AraC family transcriptional regulator compare
PS417_23380 -0.6 -1.2 cytochrome o ubiquinol oxidase subunit III compare
PS417_12820 -0.6 -1.5 hypothetical protein compare
PS417_15540 -0.6 -0.8 NUDIX hydrolase compare
PS417_12135 -0.6 -1.8 peptidylprolyl isomerase compare
PS417_16490 -0.6 -1.3 cell division protein FtsK compare
PS417_13800 -0.6 -2.0 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_19200 -0.6 -1.7 fumarate hydratase compare
PS417_01465 -0.6 -1.9 hypothetical protein compare
PS417_18590 -0.5 -1.5 SAM-dependent methyltransferase compare
PS417_14240 -0.5 -1.4 isochorismatase compare
PS417_20825 -0.5 -0.9 drug:proton antiporter compare
PS417_19065 -0.5 -0.7 monooxygenase compare
PS417_14405 -0.5 -2.4 ABC transporter permease compare
PS417_08930 -0.5 -1.6 hypothetical protein compare
PS417_04500 -0.5 -1.0 hypothetical protein compare
PS417_08320 -0.5 -1.7 metal-chelation protein CHAD compare
PS417_20915 -0.5 -2.2 hypothetical protein compare
PS417_02575 -0.5 -2.5 membrane protein compare
PS417_11715 -0.5 -1.8 chromophore maturation protein PvdO compare
PS417_08540 -0.5 -1.7 RNA helicase compare
PS417_12670 -0.5 -1.3 hypothetical protein compare
PS417_09010 -0.5 -0.9 phosphohistidine phosphatase compare
PS417_14305 -0.5 -2.2 hydroxyproline-2-epimerase compare
PS417_13340 -0.5 -2.0 hypothetical protein compare
PS417_15275 -0.5 -2.5 type VI secretion protein compare
PS417_03935 -0.5 -1.7 N-acetyl-anhydromuranmyl-L-alanine amidase compare
PS417_10680 -0.5 -1.5 enoyl-CoA hydratase compare
PS417_20050 -0.5 -3.9 cobalamin biosynthesis protein CobD compare
PS417_05235 -0.5 -1.3 peptidase inhibitor I42 compare
PS417_26510 -0.5 -3.4 5,10-methylenetetrahydrofolate reductase compare
PS417_07175 -0.5 -2.5 beta-lactamase compare
PS417_26230 -0.5 -1.8 electron transfer flavoprotein subunit alpha compare
PS417_07170 -0.5 -1.6 hypothetical protein compare
PS417_27800 -0.5 -2.0 exodeoxyribonuclease III compare
PS417_11640 -0.5 -2.1 GntR family transcriptional regulator compare
PS417_08380 -0.5 -2.9 ABC transporter ATP-binding protein compare
PS417_11405 -0.5 -2.2 precorrin 6A synthase compare
PS417_19355 -0.5 -1.7 glutaredoxin compare
PS417_03045 -0.5 -1.3 hypothetical protein compare
PS417_12345 -0.5 -2.3 cobalamin biosynthesis protein CobW compare
PS417_17735 -0.5 -1.3 LacI family transcriptional regulator compare
PS417_10640 -0.5 -1.6 GNAT family acetyltransferase compare
PS417_18730 -0.5 -0.9 ABC transporter permease compare
PS417_28230 -0.5 -1.4 transcriptional regulator compare
PS417_22580 -0.5 -1.6 membrane protein compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source L-Glutamine in Pseudomonas simiae WCS417

For carbon source L-Glutamine across organisms