Experiment set3IT003 for Pontibacter actiniarum KMM 6156, DSM 19842
marine broth with Cephalothin sodium salt 0.005 mg/ml
Group: stressMedia: marine_broth_2216 + Cephalothin sodium salt (0.005 mg/ml)
Culturing: Ponti_ML7, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 4.9 generations
By: Adam on 8-May-17
Media components: 5 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.1 g/L Ferric citrate, 19.45 g/L Sodium Chloride, 5.9 g/L Magnesium chloride hexahydrate, 3.24 g/L Magnesium sulfate, 1.8 g/L Calcium chloride, 0.55 g/L Potassium Chloride, 0.16 g/L Sodium bicarbonate, 0.08 g/L Potassium bromide, 34 mg/L Strontium chloride, 22 mg/L Boric Acid, 4 mg/L Sodium metasilicate, 2.4 mg/L sodium fluoride, 8 mg/L Disodium phosphate
Growth plate: 1739 A4
Specific Phenotypes
For 42 genes in this experiment
For stress Cephalothin sodium salt in Pontibacter actiniarum KMM 6156, DSM 19842
For stress Cephalothin sodium salt across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Carotenoid biosynthesis - General
- Peptidoglycan biosynthesis
- Biosynthesis of terpenoids and steroids
- Biosynthesis of plant hormones
- Ubiquinone and menaquinone biosynthesis
- Benzoate degradation via hydroxylation
- Lipopolysaccharide biosynthesis
- Fructose and mannose metabolism
- Fatty acid biosynthesis
- Puromycin biosynthesis
- Methionine metabolism
- Lysine degradation
- Penicillin and cephalosporin biosynthesis
- beta-Lactam resistance
- 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation
- Fluorobenzoate degradation
- Tryptophan metabolism
- N-Glycan biosynthesis
- O-Glycan biosynthesis
- High-mannose type N-glycan biosynthesis
- O-Mannosyl glycan biosynthesis
- Keratan sulfate biosynthesis
- Glycerolipid metabolism
- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis
- alpha-Linolenic acid metabolism
- Sphingolipid metabolism
- Glycosphingolipid biosynthesis - lacto and neolacto series
- Glycosphingolipid biosynthesis - globo series
- Glycosphingolipid biosynthesis - ganglio series
- Toluene and xylene degradation
- Naphthalene and anthracene degradation
- 1,4-Dichlorobenzene degradation
- Benzoate degradation via CoA ligation
- Riboflavin metabolism
- Nicotinate and nicotinamide metabolism
- Biotin metabolism
- Porphyrin and chlorophyll metabolism
- Terpenoid biosynthesis
- Limonene and pinene degradation
- Zeatin biosynthesis
- Flavonoid biosynthesis
- Anthocyanin biosynthesis
- Flavone and flavonol biosynthesis
- Biosynthesis of unsaturated fatty acids
- Biosynthesis of phenylpropanoids
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: