| | gene | name | fitness | t score | description | |
|---|
| b1863 | ruvC | -3.4 | -2.3 | Holliday junction resolvase (NCBI) | compare |
| b0740 | tolB | -3.1 | -6.5 | translocation protein TolB precursor (NCBI) | compare |
| b0737 | tolQ | -3.1 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3979 | thrT | -2.3 | -0.7 | tRNA-Thr (NCBI) | compare |
| b1348 | lar | -2.3 | -2.5 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b3613 | yibP | -2.2 | -1.5 | putative membrane protein (VIMSS) | compare |
| b1860 | ruvB | -2.1 | -1.4 | Holliday junction DNA helicase B (NCBI) | compare |
| b2894 | xerD | -2.0 | -1.4 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4701 | sokX | -2.0 | -0.9 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1882 | cheY | -1.9 | -0.6 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1600 | mdtJ | -1.9 | -1.3 | multidrug efflux system transporter (NCBI) | compare |
| b0630 | lipB | -1.9 | -1.3 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4535 | yniD | -1.9 | -1.6 | predicted protein (RefSeq) | compare |
| b0957 | ompA | -1.8 | -4.0 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3620 | rfaF | -1.8 | -6.1 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0738 | tolR | -1.8 | -3.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3863 | polA | -1.8 | -1.2 | DNA polymerase I (NCBI) | compare |
| b2330 | yfcB | -1.8 | -2.0 | putative adenine-specific methylase (VIMSS) | compare |
| b2498 | upp | -1.7 | -4.4 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0053 | surA | -1.7 | -3.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0990 | cspG | -1.6 | -0.9 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4042 | dgkA | -1.6 | -2.1 | diacylglycerol kinase (NCBI) | compare |
| b2830 | nudH | -1.6 | -1.5 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0739 | tolA | -1.6 | -3.5 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1161 | ycgX | -1.5 | -0.8 | hypothetical protein (NCBI) | compare |
| b3619 | rfaD | -1.5 | -4.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b4603 | rseX | -1.4 | -0.8 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1332 | ynaJ | -1.3 | -0.6 | predicted inner membrane protein (NCBI) | compare |
| b2426 | ucpA | -1.3 | -3.0 | putative oxidoreductase (VIMSS) | compare |
| b0222 | lpcA | -1.3 | -1.6 | phosphoheptose isomerase (NCBI) | compare |
| b3621 | rfaC | -1.3 | -5.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1648 | b1648 | -1.2 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3052 | rfaE | -1.2 | -3.8 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3839 | tatC | -1.1 | -5.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3229 | sspA | -1.1 | -2.1 | stringent starvation protein A (NCBI) | compare |
| b0683 | fur | -1.1 | -1.3 | ferric uptake regulator (NCBI) | compare |
| b0145 | dksA | -1.1 | -3.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4702 | mgtL | -1.1 | -1.9 | regulatory leader peptide for mgtA (NCBI) | compare |
| b2531 | iscR | -1.1 | -1.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4520 | ymgF | -1.1 | -1.2 | hypothetical protein (NCBI) | compare |
| b2699 | recA | -1.1 | -1.2 | recombinase A (NCBI) | compare |
| b1861 | ruvA | -1.1 | -1.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1556 | b1556 | -1.1 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1591 | b1591 | -1.1 | -2.0 | putative oxidoreductase component (VIMSS) | compare |
| b4594 | ymgJ | -1.1 | -2.2 | hypothetical protein (RefSeq) | compare |
| b2512 | yfgL | -1.1 | -3.6 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b4171 | miaA | -1.1 | -1.0 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2620 | smpB | -1.0 | -0.9 | SsrA-binding protein (NCBI) | compare |
| b1429 | tehA | -1.0 | -0.9 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b4146 | yjeK | -1.0 | -0.7 | predicted lysine aminomutase (NCBI) | compare |
| b0232 | yafN | -1.0 | -0.4 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3290 | trkA | -1.0 | -1.9 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1258 | yciF | -1.0 | -0.7 | hypothetical protein (NCBI) | compare |
| b1175 | minD | -1.0 | -2.7 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b4529 | ydbJ | -1.0 | -1.1 | hypothetical protein (NCBI) | compare |
| b1259 | yciG | -1.0 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1279 | yciS | -1.0 | -0.7 | conserved inner membrane protein (NCBI) | compare |
| b0200 | gmhB | -1.0 | -1.4 | hypothetical protein (NCBI) | compare |
| b1291 | sapD | -1.0 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4413 | sokC | -0.9 | -1.3 | regulatory antisense RNA (NCBI) | compare |
| b1370 | insH-5 | -0.9 | -1.8 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b1185 | dsbB | -0.9 | -1.7 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0741 | pal | -0.9 | -1.8 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1848 | yebG | -0.9 | -1.2 | conserved protein regulated by LexA (NCBI) | compare |
| b1524 | yneH | -0.9 | -0.8 | predicted glutaminase (NCBI) | compare |
| b0535 | fimZ | -0.9 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1290 | sapF | -0.9 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1557 | cspB | -0.9 | -1.7 | Qin prophage; cold shock protein (NCBI) | compare |
| b2189 | proL | -0.9 | -1.1 | tRNA-Pro (NCBI) | compare |
| b2209 | eco | -0.9 | -1.5 | ecotin precursor (NCBI) | compare |
| b3466 | yhhL | -0.9 | -2.7 | conserved inner membrane protein (NCBI) | compare |
| b1493 | gadB | -0.9 | -0.5 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b2085 | b2085 | -0.9 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b3870 | glnA | -0.9 | -2.5 | glutamine synthetase (NCBI) | compare |
| b2141 | yohJ | -0.9 | -2.6 | hypothetical protein (NCBI) | compare |
| b1847 | yebF | -0.9 | -0.9 | predicted protein (RefSeq) | compare |
| b0051 | ksgA | -0.8 | -3.0 | dimethyladenosine transferase (NCBI) | compare |
| b2567 | rnc | -0.8 | -0.5 | ribonuclease III (NCBI) | compare |
| b3163 | nlpI | -0.8 | -1.8 | hypothetical protein (NCBI) | compare |
| b3341 | rpsG | -0.8 | -0.6 | 30S ribosomal protein S7 (NCBI) | compare |
| b1461 | ydcE | -0.8 | -2.2 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b1595 | ynfL | -0.8 | -1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2935 | tktA | -0.8 | -1.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0623 | cspE | -0.8 | -1.5 | cold shock protein E (NCBI) | compare |
| b3631 | rfaG | -0.8 | -6.1 | glucosyltransferase I (NCBI) | compare |
| b2446 | yffO | -0.8 | -1.7 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b2582 | trxC | -0.8 | -1.8 | thioredoxin 2 (NCBI) | compare |
| b2939 | yqgB | -0.8 | -1.1 | predicted protein (RefSeq) | compare |
| b1434 | ydcN | -0.8 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4184 | yjfL | -0.8 | -2.4 | conserved inner membrane protein (NCBI) | compare |
| b1831 | proQ | -0.7 | -2.4 | putative solute/DNA competence effector (NCBI) | compare |
| b1540 | ydfH | -0.7 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0178 | hlpA | -0.7 | -1.9 | periplasmic chaperone (NCBI) | compare |
| b1850 | eda | -0.7 | -1.3 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1160 | elbA | -0.7 | -0.6 | hypothetical protein (NCBI) | compare |
| b1143 | ymfI | -0.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0720 | gltA | -0.7 | -4.1 | citrate synthase (NCBI) | compare |
| b1103 | ycfF | -0.7 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2485 | hyfE | -0.7 | -2.9 | hydrogenase 4, membrane subunit (NCBI) | compare |
| b0641 | rlpB | -0.7 | -0.9 | minor lipoprotein (NCBI) | compare |
| b0726 | sucA | -0.7 | -2.0 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0430 | cyoC | -0.7 | -2.5 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2910 | zapA | -0.7 | -1.3 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1187 | fadR | -0.7 | -1.8 | fatty acid metabolism regulator (NCBI) | compare |
| b4699 | fnrS | -0.7 | -0.4 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1677 | lpp | -0.7 | -0.9 | murein lipoprotein (NCBI) | compare |
| b2198 | ccmD | -0.7 | -1.3 | cytochrome c biogenesis protein (NCBI) | compare |
| b4202 | rpsR | -0.7 | -0.8 | 30S ribosomal protein S18 (NCBI) | compare |
| b4397 | creA | -0.7 | -3.3 | hypothetical protein (NCBI) | compare |
| b2279 | nuoK | -0.7 | -1.3 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0001 | thrL | -0.7 | -1.7 | thr operon leader peptide (NCBI) | compare |
| b1454 | yncG | -0.7 | -1.4 | predicted enzyme (NCBI) | compare |
| b2058 | wcaB | -0.7 | -0.8 | predicted acyl transferase (NCBI) | compare |
| b2569 | lepA | -0.7 | -2.1 | GTP-binding protein LepA (NCBI) | compare |
| b1070 | flgN | -0.7 | -0.8 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1176 | minC | -0.7 | -1.4 | septum formation inhibitor (NCBI) | compare |
| b0439 | lon | -0.7 | -2.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b4177 | purA | -0.6 | -1.3 | adenylosuccinate synthetase (NCBI) | compare |
| b2734 | pphB | -0.6 | -2.3 | serine/threonine-specific protein phosphatase 2 (NCBI) | compare |
| b4050 | yjbO | -0.6 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1760 | ynjH | -0.6 | -1.5 | hypothetical protein (NCBI) | compare |
| b4093 | phnO | -0.6 | -2.8 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0730 | mngR | -0.6 | -0.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1013 | ycdC | -0.6 | -1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3973 | birA | -0.6 | -1.6 | biotin--protein ligase (NCBI) | compare |
| b1408 | b1408 | -0.6 | -2.5 | probable enzyme (VIMSS) | compare |
| b1105 | ycfM | -0.6 | -1.5 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1362 | rzpR | -0.6 | -1.4 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b4172 | hfq | -0.6 | -0.4 | RNA-binding protein Hfq (NCBI) | compare |
| b4239 | treC | -0.6 | -1.3 | trehalose-6-P hydrolase (NCBI) | compare |
| b2369 | evgA | -0.6 | -1.2 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b1236 | galU | -0.6 | -2.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b4203 | rplI | -0.6 | -2.2 | 50S ribosomal protein L9 (NCBI) | compare |
| b2659 | b2659 | -0.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3629 | rfaS | -0.6 | -1.2 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3630 | rfaP | -0.6 | -3.8 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1836 | yebV | -0.6 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1656 | sodB | -0.6 | -1.4 | superoxide dismutase, Fe (NCBI) | compare |
| b2297 | pta | -0.6 | -0.4 | phosphate acetyltransferase (NCBI) | compare |
| b1692 | ydiB | -0.6 | -1.5 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b0890 | ftsK | -0.6 | -2.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2048 | cpsG | -0.6 | -2.3 | phosphomannomutase (NCBI) | compare |
| b0250 | ykfB | -0.6 | -1.9 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b3134 | agaW | -0.6 | -1.5 | N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) (RefSeq) | compare |
| b4418 | sraB | -0.6 | -0.9 | unknown RNA (NCBI) | compare |
| b2990 | hybG | -0.6 | -1.5 | hydrogenase 2 accessory protein (NCBI) | compare |
| b4622 | ytcA | -0.6 | -2.3 | hypothetical protein (RefSeq) | compare |
| b3784 | rfe | -0.6 | -3.0 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1536 | ydeI | -0.6 | -0.4 | hypothetical protein (NCBI) | compare |
| b4452 | gadY | -0.6 | -3.0 | unknown RNA (NCBI) | compare |
| b1309 | ycjM | -0.6 | -1.6 | putative polysaccharide hydrolase (VIMSS) | compare |
| b4533 | ynfO | -0.6 | -1.3 | Qin prophage; predicted protein (NCBI) | compare |
| b0088 | murD | -0.6 | -1.3 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b4494 | arpB | -0.5 | -0.7 | no description | compare |
| b1914 | uvrY | -0.5 | -1.7 | response regulator (NCBI) | compare |
| b2504 | yfgG | -0.5 | -0.3 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b4630 | ykgP | -0.5 | -1.4 | no description | compare |
| b1976 | b1976 | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0920 | ycbC | -0.5 | -1.8 | conserved inner membrane protein (NCBI) | compare |
| b4545 | ypdJ | -0.5 | -0.8 | no description | compare |
| b1623 | add | -0.5 | -2.2 | adenosine deaminase (NCBI) | compare |
| b0499 | ylbH | -0.5 | -1.4 | conserved protein, rhs-like (RefSeq) | compare |
| b0011 | yaaW | -0.5 | -2.9 | hypothetical protein (NCBI) | compare |
| b1624 | b1624 | -0.5 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1712 | ihfA | -0.5 | -1.0 | integration host factor subunit alpha (NCBI) | compare |
| b3649 | rpoZ | -0.5 | -1.4 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4654 | yjdQ | -0.5 | -2.5 | no description | compare |
| b4181 | yjfI | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b4582 | yoeA | -0.5 | -2.1 | no description | compare |
| b2576 | srmB | -0.5 | -1.4 | ATP-dependent RNA helicase (NCBI) | compare |
| b1465 | narV | -0.5 | -1.0 | nitrate reductase 2 (NRZ), gamma subunit (NCBI) | compare |
| b1932 | yedL | -0.5 | -2.4 | predicted acyltransferase (NCBI) | compare |
| b1192 | ldcA | -0.5 | -1.7 | L,D-carboxypeptidase A (NCBI) | compare |
| b1547 | stfQ | -0.5 | -2.3 | Qin prophage; predicted side tail fibre assembly protein (NCBI) | compare |
| b1944 | fliL | -0.5 | -1.7 | flagellar basal body-associated protein FliL (NCBI) | compare |
| b2294 | b2294 | -0.5 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b0030 | rihC | -0.5 | -3.2 | ribonucleoside hydrolase 3 (NCBI) | compare |
| b2175 | spr | -0.5 | -1.4 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0921 | smtA | -0.5 | -2.1 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b4513 | kdpF | -0.5 | -1.3 | potassium ion accessory transporter subunit (NCBI) | compare |
| b0013 | yaaI | -0.5 | -1.9 | hypothetical protein (NCBI) | compare |
| b3889 | yiiE | -0.5 | -0.8 | predicted transcriptional regulator (RefSeq) | compare |
| b4246 | pyrL | -0.5 | -1.2 | pyrBI operon leader peptide (NCBI) | compare |
| b0927 | ycbL | -0.5 | -1.7 | predicted metal-binding enzyme (NCBI) | compare |
| b2195 | ccmG | -0.5 | -1.6 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b2494 | yfgC | -0.5 | -2.8 | predicted peptidase (NCBI) | compare |
| b4375 | prfC | -0.5 | -1.1 | peptide chain release factor 3 (NCBI) | compare |
| b4444 | rygA | -0.5 | -1.4 | unknown RNA (NCBI) | compare |
| b1506 | yneL | -0.5 | -0.5 | predicted transcriptional regulator (NCBI) | compare |
| b3817 | yigF | -0.5 | -2.2 | conserved inner membrane protein (NCBI) | compare |
| b2165 | yeiN | -0.5 | -2.0 | hypothetical protein (NCBI) | compare |
| b2934 | cmtB | -0.5 | -0.3 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1926 | fliT | -0.5 | -1.1 | predicted chaperone (NCBI) | compare |
| b1762 | b1762 | -0.5 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b2352 | yfdI | -0.5 | -0.3 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b2457 | cchA | -0.5 | -1.4 | detox protein (VIMSS) | compare |
| b2822 | recC | -0.5 | -2.2 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b3014 | yqhH | -0.5 | -1.9 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0234 | yafP | -0.5 | -0.3 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4588 | ylcH | -0.5 | -1.9 | hypothetical protein, DLP12 prophage (RefSeq) | compare |