Experiment set38IT048 for Pseudomonas putida KT2440

Compare to:

R2A with Fusaric acid 240 ug/mL

200 most important genes:

  gene name fitness t score description  
PP_0691 -5.7 -3.9 Glutamate 5-kinase compare
PP_5095 -5.1 -3.5 pyrroline-5-carboxylate reductase compare
PP_4937 -5.0 -7.5 toluene tolerance protein compare
PP_0846 -4.9 -3.0 DnaK-like molecular chaperone specific for IscU compare
PP_4799 -4.9 -3.4 putative Muramoyltetrapeptide carboxypeptidase compare
PP_4804 -4.6 -4.5 RlpA-like lipoprotein compare
PP_4700 -4.3 -3.0 pantothenate synthetase compare
PP_0856 -4.2 -6.6 conserved lipoprotein of unknown function compare
PP_0719 -3.9 -2.7 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_4724 -3.9 -2.7 Carbamoyl-phosphate synthase small chain compare
PP_1654 -3.9 -2.7 cysteine synthase B compare
PP_4265 -3.8 -4.3 DNA-binding transcriptional dual regulator compare
PP_4999 -3.5 -2.4 dihydroorotase-like protein compare
PP_4262 -3.3 -3.1 Cytochrome oxidase maturation protein, cbb3-type compare
PP_2336 -3.2 -6.5 aconitate hydratase 1 compare
PP_4723 -3.0 -3.0 Carbamoyl-phosphate synthase large chain compare
PP_2337 -2.8 -2.6 aconitate isomerase compare
PP_4994 -2.8 -4.6 conserved protein of unknown function compare
PP_3821 -2.7 -6.9 UTP-glucose-1-phosphate uridylyltransferase compare
PP_0127 -2.6 -4.6 Thiol:disulfide interchange protein compare
PP_0809 -2.6 -7.9 disulfide bond formation protein B compare
PP_1664 -2.6 -4.9 phosphoribosylglycinamide formyltransferase 1 compare
PP_4693 -2.5 -4.9 RNA polymerase-binding transcription factor DksA compare
PP_1764 -2.2 -3.1 Phosphoglycolate phosphatase 2 compare
PP_4785 -2.2 -4.2 conserved exported protein of unknown function compare
PP_3999 -2.1 -6.7 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_1734 -2.1 -5.0 Probable septum site-determining protein MinC compare
PP_4943 -2.1 -3.0 putative Glycosyl transferase compare
PP_2322 -2.1 -5.4 Major outer membrane lipoprotein compare
PP_1186 -2.0 -2.5 two component system DNA-binding transcriptional dual regulator compare
PP_1152 -2.0 -6.1 putative membrane fusion efflux protein compare
PP_4129 -2.0 -3.8 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_4004 -1.9 -7.8 DNA translocase FtsK compare
PP_0841 -1.9 -3.2 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR compare
PP_4560 -1.8 -4.8 putative Ribonuclease BN compare
PP_1151 -1.8 -4.1 conserved protein of unknown function compare
PP_5706 -1.8 -1.9 Sec translocation complex - SecG subunit compare
PP_1187 -1.8 -6.7 sensor protein compare
PP_4942 -1.7 -2.8 conserved protein of unknown function compare
PP_2302 -1.7 -4.9 DNA-binding, ATP-dependent protease compare
PP_0833 -1.7 -2.7 queuine tRNA-ribosyltransferase compare
PP_0962 -1.7 -2.7 toluene-tolerance protein compare
PP_4902 -1.7 -2.7 Oligoribonuclease compare
PP_1198 -1.7 -3.5 transcriptional regulator, Cro/CI family (higA antitoxin like) compare
PP_0346 -1.7 -4.7 putative Heptose kinase WapQ compare
PP_5084 -1.7 -6.4 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase compare
PP_4952 -1.7 -2.1 ATP-dependent RNA helicase, specific for 23S rRNA compare
PP_2328 -1.7 -3.1 Phosphoadenosine phosphosulfate reductase compare
PP_1528 -1.7 -1.8 conserved protein of unknown function compare
PP_4008 -1.6 -5.5 ATP-dependent serine protease compare
PP_1779 -1.6 -4.4 Lipopolysaccharide ABC export system, ATP-binding protein compare
PP_5393 -1.6 -1.5 putative metal-binding chaperone compare
PP_5748 -1.6 -1.8 cytochrome c heme lyase subunit compare
PP_1150 -1.6 -4.6 putative Membrane protein compare
PP_2370 -1.6 -1.7 conserved protein of unknown function compare
PP_3245 -1.5 -1.8 conserved protein of unknown function compare
PP_1237 -1.5 -1.6 4-hydroxy-tetrahydrodipicolinate synthase compare
PP_2320 -1.5 -7.2 conserved exported protein of unknown function compare
PP_2433 -1.5 -1.8 conserved protein of unknown function compare
PP_5000 -1.5 -1.5 peptidase component of the ATP-dependent HslVU protease compare
PP_5328 -1.5 -2.3 putative phosphate transport system permease protein compare
PP_1898 -1.4 -2.2 MotA/TolQ/ExbB proton channel family protein compare
PP_2000 -1.4 -2.1 amidophosphoribosyl transferase compare
PP_1224 -1.4 -5.1 periplasmic subunit of the TolQRA transport system compare
PP_5329 -1.4 -3.3 putative phosphate ABC transporter, periplasmic phosphate-binding protein compare
PP_0025 -1.4 -1.1 hypothetical protein compare
PP_4204 -1.3 -2.7 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor compare
PP_5014 -1.3 -1.8 Phosphoribosyl-AMP cyclohydrolase compare
PP_1468 -1.3 -2.2 Tyrosine recombinase XerD compare
PP_1783 -1.3 -2.1 dTDP-glucose pyrophosphorylase compare
PP_0999 -1.3 -2.7 carbamate kinase compare
PP_2633 -1.2 -1.9 conserved protein of unknown function compare
PP_2462 -1.2 -2.2 conserved protein of unknown function compare
PP_0393 -1.2 -2.2 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_1232 -1.2 -5.7 conserved exported protein of unknown function compare
PP_0938 -1.2 -5.9 conserved protein of unknown function compare
PP_5090 -1.2 -3.3 putative cell division protein compare
PP_4909 -1.2 -4.4 phosphoserine phosphatase compare
PP_2087 -1.2 -2.1 CmpX protein compare
PP_2903 -1.2 -1.1 peptidyl-prolyl cis-trans isomerase B (rotamase B) compare
PP_4891 -1.2 -2.6 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_0960 -1.2 -3.1 phospholipid ABC transporter binding protein compare
PP_2371 -1.2 -2.5 Sulphite reductase hemoprotein, beta subunit compare
PP_5168 -1.2 -2.9 sulfate/thiosulfate import ATP-binding protein compare
PP_2307 -1.2 -3.1 conserved protein of unknown function compare
PP_0852 -1.2 -3.4 Transcriptional regulator, Cro/CI family compare
PP_4126 -1.1 -1.3 NADH-quinone oxidoreductase subunit I compare
PP_0204 -1.1 -4.7 Transcriptional regulator, GntR family compare
PP_1733 -1.1 -2.6 membrane ATPase of the MinC-MinD-MinE system compare
PP_1778 -1.1 -4.4 Lipopolysaccharide ABC export system, permease protein compare
PP_3474 -1.1 -4.3 putative Curli fiber protein CsgE compare
PP_4895 -1.1 -2.2 tRNA dimethylallyltransferase compare
PP_0957 -1.1 -1.6 D-arabinose 5-phosphate isomerase compare
PP_4699 -1.1 -2.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_1362 -1.1 -3.4 pyruvate kinase II compare
PP_5528 -1.1 -1.7 conserved protein of unknown function compare
PP_4214 -1.1 -2.5 pyoverdine biosynthesis related protein compare
PP_5248 -1.1 -1.7 putative hydrolase compare
PP_1215 -1.1 -2.5 Crossover junction endodeoxyribonuclease RuvC compare
PP_1384 -1.1 -3.9 Probable efflux pump outer membrane protein TtgC compare
PP_1217 -1.0 -3.5 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_2323 -1.0 -3.6 conserved protein of unknown function compare
PP_4236 -1.0 -3.3 putative Thiol:disulfide interchange protein dsbE compare
PP_1353 -1.0 -1.8 conserved membrane protein of unknown function compare
PP_5028 -1.0 -2.5 proline iminopeptidase compare
PP_4936 -1.0 -4.9 O-antigen polymerase compare
PP_2547 -1.0 -2.3 Transcriptional regulator, LysR family compare
PP_5310 -1.0 -4.4 junction-specific ATP-dependent DNA helicase compare
PP_4938 -1.0 -5.3 putative Glycosyl transferase compare
PP_0339 -1.0 -2.4 Pyruvate dehydrogenase E1 component compare
PP_1269 -1.0 -1.0 Universal stress protein family compare
PP_4342 -1.0 -1.9 flagellar synthesis regulator, putative ATPase compare
PP_1325 -1.0 -4.4 putative lipoprotein compare
PP_1001 -1.0 -1.9 arginine deiminase compare
PP_1000 -1.0 -3.0 ornithine carbamoyltransferase, catabolic compare
PP_5495 -0.9 -2.1 protein of unknown function compare
PP_2044 -0.9 -1.3 conserved inner membrane protein of unknown function compare
PP_4880 -0.9 -5.0 exoribonuclease R compare
PP_3850 -0.9 -3.6 conserved protein of unknown function compare
PP_4213 -0.9 -1.4 putative dipeptidase compare
PP_4058 -0.9 -4.7 1,4-alpha-glucan branching enzyme compare
PP_0001 -0.9 -1.0 probable chromosome-partitioning protein compare
PP_2274 -0.9 -2.4 conserved protein of unknown function compare
PP_3522 -0.9 -2.3 conserved protein of unknown function compare
PP_1605 -0.9 -1.5 Ribonuclease HII compare
PP_1002 -0.9 -3.8 arginine/ornithine antiporter compare
PP_2163 -0.9 -2.6 VacJ lipoprotein compare
PP_0961 -0.9 -3.3 toluene tolerance protein compare
PP_0048 -0.9 -1.1 conserved protein of unknown function compare
PP_4471 -0.9 -2.6 Magnesium transporter compare
PP_4227 -0.9 -1.6 conserved protein of unknown function compare
PP_0949 -0.9 -3.1 putative ATP-binding protein UPF0042 compare
PP_2932 -0.9 -3.3 Amidase family protein compare
PP_1656 -0.9 -3.5 ATP:GTP 3'-pyrophosphotransferase compare
PP_0293 -0.9 -1.2 Imidazole glycerol phosphate synthase subunit HisF compare
PP_2611 -0.9 -2.1 membrane protein of unknown function compare
PP_2309 -0.9 -1.0 conserved protein of unknown function compare
PP_2845 -0.9 -2.5 urease subunit alpha compare
PP_0236 -0.9 -2.5 NAD(P)H-dependent FMN reductase subunit compare
PP_3284 -0.9 -2.5 enoyl-CoA hydratase-isomerase compare
PP_2764 -0.9 -2.0 FMN reductase (NADPH) compare
PP_0164 -0.9 -2.5 conserved protein of unknown function compare
PP_1381 -0.9 -1.0 4-carboxymuconolactone decarboxylase compare
PP_4253 -0.9 -2.1 cytochrome c oxidase subunit, cbb3-type compare
PP_0184 -0.8 -2.7 Argininosuccinate lyase compare
PP_3378 -0.8 -1.5 putative 2-ketogluconokinase compare
PP_2088 -0.8 -2.3 RNA polymerase sigma factor SigX compare
PP_0958 -0.8 -2.8 phospholipid ABC transporter ATP-binding subunit compare
PP_1216 -0.8 -1.4 Holliday junction ATP-dependent DNA helicase RuvA compare
PP_1774 -0.8 -1.4 conserved exported protein of unknown function compare
PP_3488 -0.8 -3.7 Sco1/SenC family protein compare
PP_0087 -0.8 -2.0 conserved exported protein of unknown function compare
PP_4332 -0.8 -3.6 Chemotaxis protein CheW compare
PP_t10 -0.8 -0.8 tRNA-Pro compare
PP_1553 -0.8 -1.2 conserved protein of unknown function compare
PP_2299 -0.8 -2.2 Trigger factor compare
PP_4340 -0.8 -1.9 response regulator for chemotactic signal transduction compare
PP_1185 -0.8 -2.8 Outer membrane protein H1 compare
PP_3429 -0.8 -3.7 Response regulator/sensor histidine kinase compare
PP_1763 -0.8 -2.0 putative oxidoreductase compare
PP_3241 -0.8 -1.0 conserved exported protein of unknown function compare
PP_1385 -0.8 -5.4 Probable efflux pump membrane transporter TtgB compare
PP_5110 -0.8 -1.7 cytokinetic ring ABC transporter-like subunit - ATP-binding subunit compare
PP_1552 -0.8 -2.4 putative Phage replication protein compare
PP_3802 -0.8 -2.8 putative Cation ABC transporter, ATP-binding protein compare
PP_5500 -0.8 -1.5 protein of unknown function compare
PP_2718 -0.8 -2.0 arsenic resistance transcriptional regulator compare
PP_1987 -0.8 -1.4 Methlytransferase, UbiE/COQ5 family compare
PP_1076 -0.8 -2.7 aquaglyceroporin compare
PP_3505 -0.8 -1.6 conserved protein of unknown function compare
PP_3814 -0.8 -1.7 Polyamine ABC transporter, periplasmic polyamine-binding protein compare
PP_4131 -0.8 -3.1 NADH-quinone oxidoreductase subunit N compare
PP_3449 -0.8 -1.7 conserved exported protein of unknown function compare
PP_0832 -0.8 -1.8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_3204 -0.8 -1.6 conserved protein of unknown function compare
PP_1738 -0.8 -3.2 conserved exported protein of unknown function conserved
PP_1562 -0.8 -1.0 putative Phage terminase, small subunit compare
PP_4917 -0.8 -2.6 3',5'-cyclic-nucleotide phosphodiesterase compare
PP_3409 -0.8 -1.8 putative Cobalamin biosynthesis protein cobE compare
PP_4379 -0.8 -1.7 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_3121 -0.8 -1.7 transcriptional regulator, LysR family compare
PP_4254 -0.8 -1.1 conserved protein of unknown function compare
PP_2898 -0.8 -2.0 conserved exported protein of unknown function compare
PP_5327 -0.8 -1.6 putative phosphate ABC transporter, permease subunit compare
PP_0908 -0.8 -3.5 conserved exported protein of unknown function compare
PP_0345 -0.8 -1.4 putative Heptose kinase WapP compare
PP_5619 -0.7 -1.8 protein of unknown function compare
PP_3102 -0.7 -2.1 conserved protein of unknown function compare
PP_2530 -0.7 -1.4 conserved protein of unknown function compare
PP_2722 -0.7 -2.3 conserved protein of unknown function compare
PP_5225 -0.7 -1.0 frataxin compare
PP_5367 -0.7 -2.3 Transketolase domain protein compare
PP_3447 -0.7 -0.9 conserved membrane protein of unknown function compare
PP_4130 -0.7 -1.9 NADH:ubiquinone oxidoreductase, membrane subunit M compare
PP_0319 -0.7 -1.4 conserved protein of unknown function compare
PP_2304 -0.7 -3.1 putative Peptidyl-prolyl cis-trans isomerase D compare
PP_0801 -0.7 -1.0 conserved exported protein of unknown function compare
PP_2341 -0.7 -0.7 6-carboxy-5,6,7,8-tetrahydropterin synthase compare
PP_0063 -0.7 -2.9 putative Lipid A biosynthesis lauroyl acyltransferase compare
PP_0872 -0.7 -2.6 Peptide chain release factor 3 compare


Specific Phenotypes

For 1 genes in this experiment

For stress Fusaric acid in Pseudomonas putida KT2440

For stress Fusaric acid across organisms