| | gene | name | fitness | t score | description | |
|---|
| b0683 | fur | -3.9 | -2.4 | ferric uptake regulator (NCBI) | compare |
| b1361 | ydaW | -2.7 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0688 | pgm | -2.6 | -4.8 | phosphoglucomutase (NCBI) | compare |
| b2279 | nuoK | -2.4 | -2.4 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0740 | tolB | -2.3 | -6.0 | translocation protein TolB precursor (NCBI) | compare |
| b0142 | folK | -2.3 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2281 | nuoI | -2.2 | -3.7 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2567 | rnc | -2.2 | -1.5 | ribonuclease III (NCBI) | compare |
| b2283 | nuoG | -2.2 | -8.4 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b0722 | sdhD | -2.2 | -6.7 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0741 | pal | -2.1 | -4.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0726 | sucA | -2.1 | -4.4 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2276 | nuoN | -2.1 | -6.8 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b4042 | dgkA | -2.1 | -2.0 | diacylglycerol kinase (NCBI) | compare |
| b1192 | ldcA | -2.1 | -5.1 | L,D-carboxypeptidase A (NCBI) | compare |
| b3613 | yibP | -2.0 | -4.7 | putative membrane protein (VIMSS) | compare |
| b0149 | mrcB | -2.0 | -13.8 | penicillin-binding protein 1b (NCBI) | compare |
| b2017 | yefM | -2.0 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1105 | ycfM | -2.0 | -5.7 | predicted outer membrane lipoprotein (NCBI) | compare |
| b2528 | iscA | -1.9 | -2.7 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0232 | yafN | -1.9 | -1.0 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3164 | pnp | -1.8 | -4.2 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2808 | gcvA | -1.8 | -4.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3962 | udhA | -1.8 | -7.4 | putative oxidoreductase (VIMSS) | compare |
| b4603 | rseX | -1.8 | -0.9 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2278 | nuoL | -1.8 | -9.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b3636 | rpmG | -1.8 | -2.7 | 50S ribosomal protein L33 (NCBI) | compare |
| b0737 | tolQ | -1.8 | -3.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1850 | eda | -1.8 | -2.9 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b4535 | yniD | -1.7 | -1.9 | predicted protein (RefSeq) | compare |
| b2282 | nuoH | -1.7 | -3.4 | NADH dehydrogenase subunit H (NCBI) | compare |
| b3075 | ebgR | -1.7 | -6.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0080 | fruR | -1.7 | -7.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2277 | nuoM | -1.7 | -6.1 | NADH dehydrogenase subunit M (NCBI) | compare |
| b4146 | yjeK | -1.7 | -1.6 | predicted lysine aminomutase (NCBI) | compare |
| b1292 | sapC | -1.6 | -2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0145 | dksA | -1.6 | -3.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0439 | lon | -1.6 | -5.5 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3398 | yrfF | -1.6 | -4.5 | predicted inner membrane protein (NCBI) | compare |
| b2286 | nuoC | -1.6 | -6.0 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b2912 | ygfA | -1.6 | -4.5 | putative ligase (VIMSS) | compare |
| b0088 | murD | -1.6 | -2.7 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b2287 | nuoB | -1.6 | -2.9 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2897 | ygfY | -1.6 | -4.4 | hypothetical protein (NCBI) | compare |
| b3778 | rep | -1.5 | -7.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b4631 | ykgQ | -1.5 | -1.4 | no description | compare |
| b0912 | ihfB | -1.5 | -4.0 | integration host factor subunit beta (NCBI) | compare |
| b4375 | prfC | -1.5 | -3.5 | peptide chain release factor 3 (NCBI) | compare |
| b1642 | slyA | -1.5 | -1.7 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0739 | tolA | -1.4 | -3.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1084 | rne | -1.4 | -5.0 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2280 | nuoJ | -1.4 | -4.7 | NADH dehydrogenase subunit J (NCBI) | compare |
| b3169 | nusA | -1.4 | -3.6 | transcription elongation factor NusA (NCBI) | compare |
| b4246 | pyrL | -1.4 | -2.3 | pyrBI operon leader peptide (NCBI) | compare |
| b1062 | pyrC | -1.4 | -6.6 | dihydroorotase (NCBI) | compare |
| b0630 | lipB | -1.4 | -0.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3979 | thrT | -1.4 | -0.5 | tRNA-Thr (NCBI) | compare |
| b1236 | galU | -1.4 | -4.6 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3290 | trkA | -1.4 | -1.6 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0723 | sdhA | -1.4 | -8.4 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b3621 | rfaC | -1.4 | -5.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3630 | rfaP | -1.3 | -7.9 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b4155 | yjeA | -1.3 | -0.9 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b2497 | uraA | -1.3 | -8.3 | uracil transporter (NCBI) | compare |
| b0161 | degP | -1.3 | -6.5 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b3021 | ygiT | -1.3 | -3.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3726 | pstA | -1.3 | -4.9 | phosphate transporter subunit (NCBI) | compare |
| b3162 | deaD | -1.3 | -4.7 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0738 | tolR | -1.3 | -2.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3619 | rfaD | -1.3 | -3.6 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0945 | pyrD | -1.3 | -7.4 | dihydroorotate dehydrogenase (NCBI) | compare |
| b3387 | dam | -1.3 | -9.2 | DNA adenine methylase (NCBI) | compare |
| b2498 | upp | -1.3 | -2.4 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0729 | sucD | -1.3 | -3.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3026 | qseC | -1.3 | -3.5 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3236 | mdh | -1.3 | -6.2 | malate dehydrogenase (NCBI) | compare |
| b1382 | ynbE | -1.3 | -1.5 | predicted lipoprotein (NCBI) | compare |
| b0724 | sdhB | -1.3 | -4.8 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b0200 | gmhB | -1.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b2168 | fruK | -1.3 | -1.5 | 1-phosphofructokinase (NCBI) | compare |
| b1235 | rssB | -1.3 | -6.4 | response regulator of RpoS (NCBI) | compare |
| b4314 | fimA | -1.3 | -5.2 | major type 1 subunit fimbrin (pilin) (NCBI) | compare |
| b3493 | pitA | -1.3 | -6.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b4232 | fbp | -1.3 | -8.7 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b2101 | yegW | -1.3 | -5.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4481 | rffT | -1.2 | -5.7 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b4320 | fimH | -1.2 | -8.7 | minor component of type 1 fimbriae (NCBI) | compare |
| b0222 | lpcA | -1.2 | -2.7 | phosphoheptose isomerase (NCBI) | compare |
| b1290 | sapF | -1.2 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1950 | fliR | -1.2 | -2.9 | flagellar biosynthesis protein R (NCBI) | compare |
| b0928 | aspC | -1.2 | -5.3 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b0437 | clpP | -1.2 | -5.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3849 | trkH | -1.2 | -8.4 | potassium transporter (NCBI) | compare |
| b2646 | ypjF | -1.2 | -2.4 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1612 | fumA | -1.2 | -2.3 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b3237 | argR | -1.2 | -4.3 | arginine repressor (NCBI) | compare |
| b4179 | vacB | -1.2 | -5.5 | putative enzyme (VIMSS) | compare |
| b2284 | nuoF | -1.2 | -3.9 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2330 | yfcB | -1.2 | -1.6 | putative adenine-specific methylase (VIMSS) | compare |
| b3867 | hemN | -1.2 | -9.1 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b0523 | purE | -1.2 | -2.9 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b1518 | lsrG | -1.2 | -1.6 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b3806 | cyaA | -1.2 | -4.4 | adenylate cyclase (NCBI) | compare |
| b0889 | lrp | -1.2 | -3.0 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b3791 | rffA | -1.2 | -5.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4509 | ylcG | -1.2 | -3.3 | DLP12 prophage; predicted protein (NCBI) | compare |
| b4319 | fimG | -1.2 | -5.6 | minor component of type 1 fimbriae (NCBI) | compare |
| b1286 | rnb | -1.2 | -2.4 | exoribonuclease II (NCBI) | compare |
| b3631 | rfaG | -1.2 | -9.0 | glucosyltransferase I (NCBI) | compare |
| b0676 | nagC | -1.1 | -6.8 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b4139 | aspA | -1.1 | -6.8 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b1861 | ruvA | -1.1 | -1.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0721 | sdhC | -1.1 | -3.4 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b2288 | nuoA | -1.1 | -3.0 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0728 | sucC | -1.1 | -5.9 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b3842 | rfaH | -1.1 | -4.9 | transcriptional activator RfaH (NCBI) | compare |
| b3860 | dsbA | -1.1 | -6.8 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b4317 | fimD | -1.1 | -10.1 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | compare |
| b4316 | fimC | -1.1 | -6.6 | periplasmic chaperone, required for type 1 fimbriae (VIMSS) | compare |
| b2906 | visC | -1.1 | -5.9 | hypothetical protein (NCBI) | compare |
| b0430 | cyoC | -1.1 | -3.6 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2340 | sixA | -1.1 | -3.6 | phosphohistidine phosphatase (NCBI) | compare |
| b0004 | thrC | -1.1 | -6.4 | threonine synthase (NCBI) | compare |
| b1049 | mdoH | -1.1 | -6.2 | glucosyltransferase MdoH (NCBI) | compare |
| b0890 | ftsK | -1.1 | -3.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1594 | dgsA | -1.1 | -3.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3844 | fre | -1.1 | -3.6 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0658 | ybeX | -1.1 | -0.7 | predicteed ion transport (NCBI) | compare |
| b4178 | yjeB | -1.1 | -4.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0438 | clpX | -1.1 | -5.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1863 | ruvC | -1.0 | -1.8 | Holliday junction resolvase (NCBI) | compare |
| b3794 | rffM | -1.0 | -5.9 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3257 | yhdT | -1.0 | -4.2 | conserved inner membrane protein (NCBI) | compare |
| b3741 | gidA | -1.0 | -3.4 | glucose-inhibited division protein A (NCBI) | compare |
| b1476 | fdnI | -1.0 | -0.9 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b3790 | rffC | -1.0 | -4.3 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2935 | tktA | -1.0 | -1.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b4585 | sroB | -1.0 | -1.0 | Novel sRNA, function unknown (RefSeq) | compare |
| b1860 | ruvB | -1.0 | -0.9 | Holliday junction DNA helicase B (NCBI) | compare |
| b0018 | mokC | -1.0 | -1.0 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b3786 | rffE | -1.0 | -7.9 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1712 | ihfA | -1.0 | -1.6 | integration host factor subunit alpha (NCBI) | compare |
| b2318 | truA | -1.0 | -2.0 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3210 | arcB | -1.0 | -5.5 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b4171 | miaA | -1.0 | -2.6 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3601 | mtlR | -1.0 | -3.9 | DNA-binding repressor (NCBI) | compare |
| b4202 | rpsR | -1.0 | -1.5 | 30S ribosomal protein S18 (NCBI) | compare |
| b4416 | rybA | -1.0 | -1.1 | unknown RNA (NCBI) | compare |
| b3628 | rfaB | -1.0 | -6.1 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b4312 | fimB | -1.0 | -6.3 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b2707 | srlR | -1.0 | -4.2 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b3973 | birA | -1.0 | -2.3 | biotin--protein ligase (NCBI) | compare |
| b1335 | ogt | -1.0 | -2.1 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b4025 | pgi | -1.0 | -5.3 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2175 | spr | -1.0 | -3.1 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b2513 | yfgM | -1.0 | -3.2 | hypothetical protein (NCBI) | compare |
| b3620 | rfaF | -1.0 | -4.2 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3627 | rfaI | -0.9 | -5.9 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b1048 | mdoG | -0.9 | -4.2 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b4191 | ulaR | -0.9 | -3.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1104 | ycfL | -0.9 | -1.2 | hypothetical protein (NCBI) | compare |
| b1777 | b1777 | -0.9 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1058 | yceO | -0.9 | -0.4 | hypothetical protein (NCBI) | compare |
| b2285 | nuoE | -0.9 | -2.1 | NADH dehydrogenase subunit E (NCBI) | compare |
| b4203 | rplI | -0.9 | -2.6 | 50S ribosomal protein L9 (NCBI) | compare |
| b3082 | ygjM | -0.9 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0049 | apaH | -0.9 | -2.3 | diadenosinetetraphosphatase (NCBI) | compare |
| b2188 | yejM | -0.9 | -6.1 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0121 | speE | -0.9 | -4.3 | spermidine synthase (NCBI) | compare |
| b1259 | yciG | -0.9 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3035 | tolC | -0.9 | -5.4 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3811 | xerC | -0.9 | -1.1 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b4324 | uxuR | -0.9 | -5.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3232 | yhcM | -0.9 | -5.6 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b0113 | pdhR | -0.9 | -2.6 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b1070 | flgN | -0.9 | -1.1 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b2809 | b2809 | -0.9 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1281 | pyrF | -0.9 | -1.9 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b3226 | yhcK | -0.9 | -3.6 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b1090 | plsX | -0.9 | -2.9 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b3438 | gntR | -0.9 | -4.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3188 | sfsB | -0.9 | -3.1 | DNA-binding transcriptional activator of maltose metabolism (NCBI) | compare |
| b2820 | recB | -0.9 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b4515 | ybgT | -0.9 | -1.3 | hypothetical protein (NCBI) | compare |
| b2830 | nudH | -0.9 | -1.2 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1503 | ydeR | -0.9 | -2.3 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b2189 | proL | -0.9 | -1.2 | tRNA-Pro (NCBI) | compare |
| b1604 | ydgH | -0.9 | -3.1 | hypothetical protein (NCBI) | compare |
| b1658 | purR | -0.9 | -3.4 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b3787 | rffD | -0.9 | -5.8 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1334 | fnr | -0.9 | -2.2 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2569 | lepA | -0.9 | -3.0 | GTP-binding protein LepA (NCBI) | compare |
| b0677 | nagA | -0.9 | -3.8 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3465 | yhhF | -0.9 | -4.5 | predicted methyltransferase (NCBI) | compare |
| b3443 | yrhA | -0.9 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4388 | serB | -0.8 | -3.9 | 3-phosphoserine phosphatase (NCBI) | compare |
| b1148 | ymfM | -0.8 | -2.4 | e14 prophage; predicted protein (NCBI) | compare |
| b4315 | fimI | -0.8 | -5.5 | fimbrial protein (VIMSS) | compare |
| b2846 | yqeH | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1600 | mdtJ | -0.8 | -1.3 | multidrug efflux system transporter (NCBI) | compare |