| | gene | name | fitness | t score | description | |
|---|
| b2285 | nuoE | -3.6 | -4.2 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1290 | sapF | -2.5 | -2.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0737 | tolQ | -2.4 | -4.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2567 | rnc | -2.3 | -1.6 | ribonuclease III (NCBI) | compare |
| b0232 | yafN | -1.9 | -1.3 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0740 | tolB | -1.9 | -5.4 | translocation protein TolB precursor (NCBI) | compare |
| b3613 | yibP | -1.9 | -4.9 | putative membrane protein (VIMSS) | compare |
| b0738 | tolR | -1.8 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2935 | tktA | -1.8 | -2.4 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3183 | obgE | -1.7 | -2.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1192 | ldcA | -1.7 | -5.7 | L,D-carboxypeptidase A (NCBI) | compare |
| b2276 | nuoN | -1.7 | -6.2 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b2280 | nuoJ | -1.6 | -5.9 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2168 | fruK | -1.6 | -2.0 | 1-phosphofructokinase (NCBI) | compare |
| b1860 | ruvB | -1.6 | -1.4 | Holliday junction DNA helicase B (NCBI) | compare |
| b2279 | nuoK | -1.6 | -1.7 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3021 | ygiT | -1.6 | -2.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3290 | trkA | -1.6 | -1.5 | potassium transporter peripheral membrane component (NCBI) | compare |
| b4647 | mokA | -1.5 | -1.0 | no description | compare |
| b2278 | nuoL | -1.5 | -8.3 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2283 | nuoG | -1.5 | -6.5 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b4155 | yjeA | -1.4 | -1.0 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b0741 | pal | -1.4 | -3.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2284 | nuoF | -1.4 | -4.9 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b3979 | thrT | -1.4 | -0.7 | tRNA-Thr (NCBI) | compare |
| b2287 | nuoB | -1.4 | -3.8 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2286 | nuoC | -1.3 | -4.6 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b4655 | ythA | -1.3 | -1.7 | expressed protein (RefSeq) | compare |
| b0722 | sdhD | -1.3 | -5.0 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0726 | sucA | -1.3 | -3.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b4603 | rseX | -1.3 | -1.1 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b0683 | fur | -1.2 | -1.7 | ferric uptake regulator (NCBI) | compare |
| b0149 | mrcB | -1.2 | -10.0 | penicillin-binding protein 1b (NCBI) | compare |
| b2277 | nuoM | -1.2 | -5.3 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1709 | btuD | -1.2 | -1.3 | vitamin B12-transporter ATPase (NCBI) | compare |
| b1062 | pyrC | -1.2 | -6.2 | dihydroorotase (NCBI) | compare |
| b2830 | nudH | -1.1 | -1.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4202 | rpsR | -1.1 | -1.8 | 30S ribosomal protein S18 (NCBI) | compare |
| b2281 | nuoI | -1.1 | -2.9 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2282 | nuoH | -1.1 | -3.0 | NADH dehydrogenase subunit H (NCBI) | compare |
| b3916 | pfkA | -1.1 | -2.4 | 6-phosphofructokinase (NCBI) | compare |
| b4375 | prfC | -1.1 | -3.4 | peptide chain release factor 3 (NCBI) | compare |
| b0724 | sdhB | -1.1 | -4.6 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2330 | yfcB | -1.1 | -1.5 | putative adenine-specific methylase (VIMSS) | compare |
| b1058 | yceO | -1.1 | -0.7 | hypothetical protein (NCBI) | compare |
| b0630 | lipB | -1.0 | -1.1 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3806 | cyaA | -1.0 | -4.1 | adenylate cyclase (NCBI) | compare |
| b2820 | recB | -1.0 | -0.9 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2576 | srmB | -1.0 | -2.7 | ATP-dependent RNA helicase (NCBI) | compare |
| b0200 | gmhB | -1.0 | -1.3 | hypothetical protein (NCBI) | compare |
| b0658 | ybeX | -0.9 | -1.2 | predicteed ion transport (NCBI) | compare |
| b0890 | ftsK | -0.9 | -3.4 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1160 | elbA | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b1281 | pyrF | -0.9 | -3.0 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b4701 | sokX | -0.9 | -0.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2897 | ygfY | -0.9 | -3.2 | hypothetical protein (NCBI) | compare |
| b3169 | nusA | -0.9 | -2.7 | transcription elongation factor NusA (NCBI) | compare |
| b4042 | dgkA | -0.9 | -1.7 | diacylglycerol kinase (NCBI) | compare |
| b2699 | recA | -0.8 | -1.1 | recombinase A (NCBI) | compare |
| b4139 | aspA | -0.8 | -6.0 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b0928 | aspC | -0.8 | -5.1 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b0080 | fruR | -0.8 | -3.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3842 | rfaH | -0.8 | -4.0 | transcriptional activator RfaH (NCBI) | compare |
| b0386 | proC | -0.8 | -3.7 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4515 | ybgT | -0.8 | -1.8 | hypothetical protein (NCBI) | compare |
| b0945 | pyrD | -0.8 | -4.9 | dihydroorotate dehydrogenase (NCBI) | compare |
| b4146 | yjeK | -0.8 | -1.6 | predicted lysine aminomutase (NCBI) | compare |
| b1084 | rne | -0.8 | -3.9 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1351 | racC | -0.8 | -0.5 | Rac prophage; predicted protein (NCBI) | compare |
| b0720 | gltA | -0.8 | -4.5 | citrate synthase (NCBI) | compare |
| b1692 | ydiB | -0.8 | -2.4 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b1951 | rcsA | -0.8 | -1.2 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b3977 | tyrU | -0.8 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b0222 | lpcA | -0.7 | -1.8 | phosphoheptose isomerase (NCBI) | compare |
| b0723 | sdhA | -0.7 | -5.1 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b1648 | b1648 | -0.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0523 | purE | -0.7 | -2.3 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b1853 | yebK | -0.7 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4695 | ykgT | -0.7 | -1.4 | no description | compare |
| b0364 | yaiS | -0.7 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1179 | ycgL | -0.7 | -2.1 | conserved protein (NCBI) | compare |
| b3636 | rpmG | -0.7 | -1.5 | 50S ribosomal protein L33 (NCBI) | compare |
| b0721 | sdhC | -0.7 | -3.6 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b0739 | tolA | -0.7 | -1.9 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0450 | glnK | -0.7 | -2.0 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1855 | lpxM | -0.7 | -3.7 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b4179 | vacB | -0.7 | -3.5 | putative enzyme (VIMSS) | compare |
| b3962 | udhA | -0.7 | -3.5 | putative oxidoreductase (VIMSS) | compare |
| b3164 | pnp | -0.7 | -1.4 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1693 | aroD | -0.7 | -3.5 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1109 | ndh | -0.7 | -3.0 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b3236 | mdh | -0.7 | -4.0 | malate dehydrogenase (NCBI) | compare |
| b0548 | ninE | -0.7 | -2.7 | DLP12 prophage; conserved protein (NCBI) | compare |
| b1409 | ynbB | -0.7 | -0.4 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b4178 | yjeB | -0.7 | -3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2110 | yehC | -0.7 | -0.7 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b0430 | cyoC | -0.7 | -2.5 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b0728 | sucC | -0.7 | -3.2 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1920 | fliY | -0.6 | -1.6 | cystine transporter subunit (NCBI) | compare |
| b1691 | ydiN | -0.6 | -2.1 | predicted transporter (RefSeq) | compare |
| b0676 | nagC | -0.6 | -3.9 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b3778 | rep | -0.6 | -3.5 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3940 | metL | -0.6 | -4.3 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b1429 | tehA | -0.6 | -0.9 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b2288 | nuoA | -0.6 | -1.4 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3860 | dsbA | -0.6 | -4.2 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b3631 | rfaG | -0.6 | -5.2 | glucosyltransferase I (NCBI) | compare |
| b1984 | asnW | -0.6 | -1.0 | tRNA-Asn (NCBI) | compare |
| b1863 | ruvC | -0.6 | -1.3 | Holliday junction resolvase (NCBI) | compare |
| b1235 | rssB | -0.6 | -3.4 | response regulator of RpoS (NCBI) | compare |
| b3162 | deaD | -0.6 | -2.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2673 | nrdH | -0.6 | -2.4 | glutaredoxin-like protein (NCBI) | compare |
| b0729 | sucD | -0.6 | -1.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3500 | gor | -0.6 | -0.9 | glutathione reductase (NCBI) | compare |
| b1438 | ydcQ | -0.6 | -1.8 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1361 | ydaW | -0.6 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1877 | yecT | -0.6 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2906 | visC | -0.6 | -3.4 | hypothetical protein (NCBI) | compare |
| b2504 | yfgG | -0.6 | -1.0 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b0564 | appY | -0.6 | -0.6 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b0439 | lon | -0.6 | -2.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3163 | nlpI | -0.6 | -2.9 | hypothetical protein (NCBI) | compare |
| b2414 | cysK | -0.6 | -4.1 | cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) | compare |
| b3204 | ptsN | -0.6 | -2.2 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b0550 | rusA | -0.6 | -1.6 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b3741 | gidA | -0.6 | -2.2 | glucose-inhibited division protein A (NCBI) | compare |
| b1185 | dsbB | -0.6 | -1.9 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0730 | mngR | -0.6 | -0.9 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b2259 | pmrD | -0.5 | -0.9 | polymyxin resistance protein B (VIMSS) | compare |
| b3935 | priA | -0.5 | -0.9 | primosome assembly protein PriA (NCBI) | compare |
| b4370 | leuQ | -0.5 | -1.7 | tRNA-Leu (NCBI) | compare |
| b4239 | treC | -0.5 | -0.5 | trehalose-6-P hydrolase (NCBI) | compare |
| b1551 | b1551 | -0.5 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b1291 | sapD | -0.5 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0088 | murD | -0.5 | -1.3 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3617 | kbl | -0.5 | -3.3 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b1363 | trkG | -0.5 | -0.3 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1992 | cobS | -0.5 | -1.6 | cobalamin synthase (NCBI) | compare |
| b1533 | ydeD | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1502 | ydeQ | -0.5 | -1.1 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0957 | ompA | -0.5 | -2.1 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b1257 | yciE | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b1753 | ynjA | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b0161 | degP | -0.5 | -3.4 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b0888 | trxB | -0.5 | -1.8 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2652 | ileY | -0.5 | -0.3 | tRNA-Ile (NCBI) | compare |
| b0033 | carB | -0.5 | -4.0 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b0431 | cyoB | -0.5 | -3.8 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b1842 | holE | -0.5 | -1.2 | DNA polymerase III, theta subunit (NCBI) | compare |
| b3791 | rffA | -0.5 | -2.7 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3849 | trkH | -0.5 | -3.7 | potassium transporter (NCBI) | compare |
| b3620 | rfaF | -0.5 | -2.4 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2297 | pta | -0.5 | -0.4 | phosphate acetyltransferase (NCBI) | compare |
| b3630 | rfaP | -0.5 | -3.4 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b4181 | yjfI | -0.5 | -1.5 | hypothetical protein (NCBI) | compare |
| b2937 | speB | -0.5 | -2.9 | agmatinase (NCBI) | compare |
| b2814 | metZ | -0.5 | -1.0 | tRNA-Met (NCBI) | compare |
| b4481 | rffT | -0.5 | -3.0 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b0627 | tatE | -0.5 | -1.1 | twin arginine translocase protein E (NCBI) | compare |
| b3101 | yqjF | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1760 | ynjH | -0.5 | -1.8 | hypothetical protein (NCBI) | compare |
| b1689 | b1689 | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3642 | pyrE | -0.5 | -1.5 | orotate phosphoribosyltransferase (NCBI) | compare |
| b1613 | manA | -0.5 | -1.0 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b4590 | ybfK | -0.5 | -0.4 | hypothetical protein (RefSeq) | compare |
| b0934 | ycbM | -0.5 | -1.6 | putative transport system permease protein (VIMSS) | compare |
| b1368 | ynaA | -0.5 | -1.3 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b2717 | hycI | -0.5 | -3.0 | protease involved in processing C-terminal end of HycE (NCBI) | compare |
| b2499 | purM | -0.5 | -2.2 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b0798 | ybiA | -0.5 | -1.5 | hypothetical protein (NCBI) | compare |
| b3601 | mtlR | -0.5 | -2.6 | DNA-binding repressor (NCBI) | compare |
| b3426 | glpD | -0.5 | -1.3 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1286 | rnb | -0.5 | -1.2 | exoribonuclease II (NCBI) | compare |
| b3725 | pstB | -0.5 | -0.3 | phosphate transporter subunit (NCBI) | compare |
| b1284 | yciT | -0.5 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1773 | ydjI | -0.5 | -0.9 | predicted aldolase (NCBI) | compare |
| b3002 | yqhA | -0.5 | -1.3 | hypothetical protein (NCBI) | compare |
| b2017 | yefM | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2055 | wcaE | -0.4 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b1461 | ydcE | -0.4 | -1.5 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b3026 | qseC | -0.4 | -1.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2929 | yggD | -0.4 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2912 | ygfA | -0.4 | -1.4 | putative ligase (VIMSS) | compare |
| b3629 | rfaS | -0.4 | -1.4 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4194 | ulaB | -0.4 | -2.0 | L-ascorbate-specific enzyme IIB component of PTS (NCBI) | compare |
| b2625 | yfjI | -0.4 | -0.5 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1989 | asnV | -0.4 | -1.4 | tRNA-Asn (NCBI) | compare |
| b4494 | arpB | -0.4 | -0.9 | no description | compare |
| b1108 | ycfP | -0.4 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3792 | wzxE | -0.4 | -2.6 | O-antigen translocase (NCBI) | compare |
| b1536 | ydeI | -0.4 | -0.4 | hypothetical protein (NCBI) | compare |
| b3281 | aroE | -0.4 | -3.7 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b0641 | rlpB | -0.4 | -0.8 | minor lipoprotein (NCBI) | compare |
| b2947 | gshB | -0.4 | -1.6 | glutathione synthetase (NCBI) | compare |
| b2074 | b2074 | -0.4 | -2.3 | putative membrane protein (VIMSS) | compare |
| b3619 | rfaD | -0.4 | -1.5 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1165 | ymgA | -0.4 | -0.2 | hypothetical protein (NCBI) | compare |
| b1129 | phoQ | -0.4 | -0.7 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0499 | ylbH | -0.4 | -1.7 | conserved protein, rhs-like (RefSeq) | compare |
| b3726 | pstA | -0.4 | -2.0 | phosphate transporter subunit (NCBI) | compare |