| | gene | name | fitness | t score | description | |
|---|
| b1105 | ycfM | -8.0 | -5.3 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1192 | ldcA | -7.1 | -6.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b0149 | mrcB | -6.3 | -20.6 | penicillin-binding protein 1b (NCBI) | compare |
| b2912 | ygfA | -4.7 | -3.2 | putative ligase (VIMSS) | compare |
| b1677 | lpp | -4.6 | -3.7 | murein lipoprotein (NCBI) | compare |
| b3792 | wzxE | -4.5 | -4.4 | O-antigen translocase (NCBI) | compare |
| b3613 | yibP | -3.9 | -6.6 | putative membrane protein (VIMSS) | compare |
| b4481 | rffT | -3.8 | -11.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b0740 | tolB | -3.7 | -4.3 | translocation protein TolB precursor (NCBI) | compare |
| b3790 | rffC | -3.6 | -9.3 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0739 | tolA | -3.6 | -3.5 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0737 | tolQ | -3.6 | -3.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0741 | pal | -3.4 | -4.0 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3791 | rffA | -3.3 | -13.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3787 | rffD | -3.2 | -15.5 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3472 | b3472 | -3.2 | -13.0 | orf, hypothetical protein (VIMSS) | compare |
| b0738 | tolR | -3.2 | -3.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3839 | tatC | -3.0 | -13.1 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3021 | ygiT | -2.9 | -3.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3794 | rffM | -2.9 | -11.0 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3786 | rffE | -2.9 | -17.2 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3784 | rfe | -2.9 | -18.3 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b4042 | dgkA | -2.9 | -2.0 | diacylglycerol kinase (NCBI) | compare |
| b0726 | sucA | -2.7 | -6.0 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1830 | prc | -2.7 | -8.1 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0088 | murD | -2.7 | -2.8 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1861 | ruvA | -2.6 | -3.3 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3405 | ompR | -2.6 | -7.3 | osmolarity response regulator (NCBI) | compare |
| b3619 | rfaD | -2.4 | -6.3 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0721 | sdhC | -2.4 | -8.1 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b3082 | ygjM | -2.1 | -2.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1863 | ruvC | -2.1 | -3.8 | Holliday junction resolvase (NCBI) | compare |
| b4139 | aspA | -2.1 | -11.0 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b3979 | thrT | -2.1 | -0.6 | tRNA-Thr (NCBI) | compare |
| b0632 | dacA | -2.1 | -10.3 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0890 | ftsK | -2.0 | -7.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3621 | rfaC | -2.0 | -7.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3620 | rfaF | -1.9 | -7.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2330 | yfcB | -1.9 | -3.4 | putative adenine-specific methylase (VIMSS) | compare |
| b3935 | priA | -1.8 | -3.8 | primosome assembly protein PriA (NCBI) | compare |
| b0222 | lpcA | -1.8 | -3.7 | phosphoheptose isomerase (NCBI) | compare |
| b2175 | spr | -1.8 | -5.7 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b2501 | ppk | -1.8 | -10.7 | polyphosphate kinase (NCBI) | compare |
| b2280 | nuoJ | -1.8 | -6.3 | NADH dehydrogenase subunit J (NCBI) | compare |
| b0232 | yafN | -1.8 | -1.0 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2350 | yfdG | -1.8 | -4.7 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b4701 | sokX | -1.7 | -0.9 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0439 | lon | -1.7 | -6.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3236 | mdh | -1.7 | -8.2 | malate dehydrogenase (NCBI) | compare |
| b0200 | gmhB | -1.7 | -2.2 | hypothetical protein (NCBI) | compare |
| b1291 | sapD | -1.7 | -2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2897 | ygfY | -1.7 | -5.1 | hypothetical protein (NCBI) | compare |
| b0585 | fes | -1.7 | -6.8 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b0142 | folK | -1.6 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b4647 | mokA | -1.6 | -0.9 | no description | compare |
| b2284 | nuoF | -1.6 | -7.0 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0723 | sdhA | -1.6 | -10.0 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b0564 | appY | -1.6 | -1.1 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b0957 | ompA | -1.6 | -4.0 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b0688 | pgm | -1.6 | -3.8 | phosphoglucomutase (NCBI) | compare |
| b0990 | cspG | -1.6 | -1.1 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3933 | ftsN | -1.5 | -8.3 | essential cell division protein (NCBI) | compare |
| b3842 | rfaH | -1.5 | -6.1 | transcriptional activator RfaH (NCBI) | compare |
| b2830 | nudH | -1.5 | -2.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3631 | rfaG | -1.5 | -11.8 | glucosyltransferase I (NCBI) | compare |
| b3052 | rfaE | -1.5 | -5.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1961 | dcm | -1.5 | -2.6 | DNA cytosine methylase (NCBI) | compare |
| b3169 | nusA | -1.5 | -3.6 | transcription elongation factor NusA (NCBI) | compare |
| b3806 | cyaA | -1.4 | -5.3 | adenylate cyclase (NCBI) | compare |
| b2276 | nuoN | -1.4 | -5.7 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0724 | sdhB | -1.4 | -5.9 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b1258 | yciF | -1.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b0722 | sdhD | -1.4 | -5.0 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b2516 | yfgA | -1.4 | -4.9 | hypothetical protein (NCBI) | compare |
| b3838 | tatB | -1.4 | -5.4 | sec-independent translocase (NCBI) | compare |
| b3388 | damX | -1.3 | -10.0 | hypothetical protein (NCBI) | compare |
| b3199 | yrbK | -1.3 | -2.6 | hypothetical protein (NCBI) | compare |
| b3811 | xerC | -1.3 | -2.4 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b4685 | yrbN | -1.3 | -2.7 | expressed protein (RefSeq) | compare |
| b1185 | dsbB | -1.3 | -2.7 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b1176 | minC | -1.3 | -3.4 | septum formation inhibitor (NCBI) | compare |
| b0677 | nagA | -1.3 | -6.3 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b2894 | xerD | -1.3 | -0.8 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0928 | aspC | -1.3 | -7.3 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b2476 | purC | -1.3 | -1.8 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b3642 | pyrE | -1.3 | -5.1 | orotate phosphoribosyltransferase (NCBI) | compare |
| b3630 | rfaP | -1.3 | -8.4 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1685 | ydiH | -1.3 | -1.4 | predicted protein (RefSeq) | compare |
| b2168 | fruK | -1.3 | -1.5 | 1-phosphofructokinase (NCBI) | compare |
| b4375 | prfC | -1.3 | -3.3 | peptide chain release factor 3 (NCBI) | compare |
| b2937 | speB | -1.3 | -6.3 | agmatinase (NCBI) | compare |
| b1062 | pyrC | -1.2 | -7.6 | dihydroorotase (NCBI) | compare |
| b2058 | wcaB | -1.2 | -1.3 | predicted acyl transferase (NCBI) | compare |
| b0720 | gltA | -1.2 | -6.6 | citrate synthase (NCBI) | compare |
| b2528 | iscA | -1.2 | -1.7 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3341 | rpsG | -1.2 | -1.4 | 30S ribosomal protein S7 (NCBI) | compare |
| b2188 | yejM | -1.2 | -7.5 | predicted hydrolase, inner membrane (NCBI) | compare |
| b2278 | nuoL | -1.2 | -6.9 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4146 | yjeK | -1.2 | -2.0 | predicted lysine aminomutase (NCBI) | compare |
| b4416 | rybA | -1.2 | -1.5 | unknown RNA (NCBI) | compare |
| b4676 | yoaK | -1.2 | -0.4 | expressed protein (RefSeq) | compare |
| b2313 | cvpA | -1.2 | -4.8 | membrane protein required for colicin V production (NCBI) | compare |
| b0032 | carA | -1.2 | -5.6 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b0920 | ycbC | -1.1 | -3.1 | conserved inner membrane protein (NCBI) | compare |
| b0364 | yaiS | -1.1 | -3.9 | orf, hypothetical protein (VIMSS) | compare |
| b2286 | nuoC | -1.1 | -4.1 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3414 | gntY | -1.1 | -4.8 | predicted gluconate transport associated protein (NCBI) | compare |
| b4535 | yniD | -1.1 | -1.4 | predicted protein (RefSeq) | compare |
| b0729 | sucD | -1.1 | -3.0 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1488 | ddpX | -1.1 | -1.8 | D-ala-D-ala dipeptidase, Zn-dependent (NCBI) | compare |
| b2620 | smpB | -1.1 | -1.1 | SsrA-binding protein (NCBI) | compare |
| b1281 | pyrF | -1.1 | -2.4 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b4245 | pyrB | -1.1 | -6.4 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b1523 | yneG | -1.1 | -2.0 | hypothetical protein (NCBI) | compare |
| b3404 | envZ | -1.1 | -6.5 | osmolarity sensor protein (NCBI) | compare |
| b2281 | nuoI | -1.1 | -3.5 | NADH dehydrogenase subunit I (NCBI) | compare |
| b3623 | rfaK | -1.1 | -1.7 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b2277 | nuoM | -1.1 | -4.6 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0548 | ninE | -1.1 | -2.3 | DLP12 prophage; conserved protein (NCBI) | compare |
| b3390 | aroK | -1.1 | -2.1 | shikimate kinase I (NCBI) | compare |
| b2283 | nuoG | -1.0 | -5.2 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b3250 | mreC | -1.0 | -1.1 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1279 | yciS | -1.0 | -1.1 | conserved inner membrane protein (NCBI) | compare |
| b2808 | gcvA | -1.0 | -3.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2576 | srmB | -1.0 | -2.4 | ATP-dependent RNA helicase (NCBI) | compare |
| b3870 | glnA | -1.0 | -3.2 | glutamine synthetase (NCBI) | compare |
| b2198 | ccmD | -1.0 | -2.6 | cytochrome c biogenesis protein (NCBI) | compare |
| b3785 | wzzE | -1.0 | -7.4 | putative transport protein (VIMSS) | compare |
| b3741 | gidA | -1.0 | -3.6 | glucose-inhibited division protein A (NCBI) | compare |
| b0590 | fepD | -1.0 | -5.0 | iron-enterobactin transporter subunit (NCBI) | compare |
| b0033 | carB | -1.0 | -7.2 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b0589 | fepG | -1.0 | -4.9 | iron-enterobactin transporter subunit (NCBI) | compare |
| b3950 | frwB | -1.0 | -2.9 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b3609 | secB | -0.9 | -2.2 | export protein SecB (NCBI) | compare |
| b1613 | manA | -0.9 | -2.4 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b0945 | pyrD | -0.9 | -5.4 | dihydroorotate dehydrogenase (NCBI) | compare |
| b3636 | rpmG | -0.9 | -1.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b1058 | yceO | -0.9 | -0.3 | hypothetical protein (NCBI) | compare |
| b0303 | ykgI | -0.9 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0728 | sucC | -0.9 | -5.1 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b3626 | rfaJ | -0.9 | -4.1 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b2287 | nuoB | -0.9 | -2.5 | NADH dehydrogenase subunit B (NCBI) | compare |
| b3629 | rfaS | -0.9 | -3.1 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4509 | ylcG | -0.9 | -1.6 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1591 | b1591 | -0.9 | -1.1 | putative oxidoreductase component (VIMSS) | compare |
| b2911 | ssrS | -0.9 | -1.0 | 6S regulatory RNA (NCBI) | compare |
| b3871 | bipA | -0.9 | -6.5 | GTP-binding protein (NCBI) | compare |
| b2252 | ais | -0.9 | -4.4 | hypothetical protein (NCBI) | compare |
| b1261 | trpB | -0.9 | -1.3 | tryptophan synthase subunit beta (NCBI) | compare |
| b4169 | amiB | -0.9 | -5.9 | N-acetylmuramoyl-l-alanine amidase II (NCBI) | compare |
| b1506 | yneL | -0.9 | -1.4 | predicted transcriptional regulator (NCBI) | compare |
| b0592 | fepB | -0.9 | -4.6 | iron-enterobactin transporter subunit (NCBI) | compare |
| b3163 | nlpI | -0.9 | -3.5 | hypothetical protein (NCBI) | compare |
| b1526 | yneJ | -0.9 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2017 | yefM | -0.8 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3261 | fis | -0.8 | -1.7 | DNA-binding protein Fis (NCBI) | compare |
| b1860 | ruvB | -0.8 | -0.9 | Holliday junction DNA helicase B (NCBI) | compare |
| b1282 | yciH | -0.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1765 | ydjA | -0.8 | -0.6 | predicted oxidoreductase (NCBI) | compare |
| b3107 | yhaL | -0.8 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4533 | ynfO | -0.8 | -1.7 | Qin prophage; predicted protein (NCBI) | compare |
| b2582 | trxC | -0.8 | -1.3 | thioredoxin 2 (NCBI) | compare |
| b1686 | ydiI | -0.8 | -1.5 | hypothetical protein (NCBI) | compare |
| b0814 | ompX | -0.8 | -2.4 | outer membrane protein X (NCBI) | compare |
| b3766 | ilvL | -0.8 | -2.3 | ilvG operon leader peptide (NCBI) | compare |
| b0161 | degP | -0.8 | -3.5 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b0249 | ykfF | -0.8 | -2.3 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b1278 | pgpB | -0.8 | -1.3 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b3962 | udhA | -0.8 | -4.0 | putative oxidoreductase (VIMSS) | compare |
| b3778 | rep | -0.8 | -4.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3183 | obgE | -0.8 | -0.7 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4066 | yjcF | -0.8 | -0.6 | hypothetical protein (NCBI) | compare |
| b3462 | ftsX | -0.8 | -3.2 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1476 | fdnI | -0.8 | -0.7 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1231 | tyrT | -0.8 | -0.6 | tRNA-Tyr (NCBI) | compare |
| b0926 | ycbK | -0.8 | -3.9 | hypothetical protein (NCBI) | compare |
| b1084 | rne | -0.8 | -3.9 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1503 | ydeR | -0.7 | -2.3 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3017 | sufI | -0.7 | -5.8 | repressor protein for FtsI (NCBI) | compare |
| b1196 | ycgY | -0.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b4603 | rseX | -0.7 | -0.5 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b3940 | metL | -0.7 | -4.6 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b1429 | tehA | -0.7 | -0.6 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b3348 | slyX | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b3977 | tyrU | -0.7 | -0.6 | tRNA-Tyr (NCBI) | compare |
| b2363 | yfdT | -0.7 | -1.8 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1502 | ydeQ | -0.7 | -1.7 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1040 | csgD | -0.7 | -1.0 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1235 | rssB | -0.7 | -3.4 | response regulator of RpoS (NCBI) | compare |
| b4191 | ulaR | -0.7 | -1.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3616 | tdh | -0.7 | -3.3 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b0547 | ybcN | -0.7 | -2.0 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3387 | dam | -0.7 | -5.3 | DNA adenine methylase (NCBI) | compare |
| b2886 | ygfS | -0.7 | -3.2 | putative oxidoreductase, Fe-S subunit (VIMSS) | compare |
| b1855 | lpxM | -0.7 | -2.3 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3389 | aroB | -0.7 | -4.5 | 3-dehydroquinate synthase (NCBI) | compare |
| b3545 | proK | -0.7 | -1.4 | tRNA-Pro (NCBI) | compare |
| b2689 | yqaA | -0.7 | -1.8 | conserved inner membrane protein (NCBI) | compare |
| b2207 | napD | -0.7 | -1.2 | assembly protein for periplasmic nitrate reductase (NCBI) | compare |
| b3860 | dsbA | -0.7 | -4.1 | periplasmic protein disulfide isomerase I (NCBI) | compare |