Experiment set36S1087 for Pseudomonas simiae WCS417

Compare to:

FRSphage

200 most important genes:

  gene name fitness t score description  
PS417_23805 -6.1 -5.9 acetolactate synthase 3 regulatory subunit compare
PS417_04415 -5.7 -7.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_01575 -5.7 -4.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_25725 -5.6 -17.7 anthranilate synthase component I compare
PS417_23800 -5.6 -7.7 ketol-acid reductoisomerase compare
PS417_25720 -5.5 -7.1 anthranilate synthase component II compare
PS417_00185 -5.4 -3.7 tryptophan synthase subunit beta compare
PS417_26740 -5.2 -8.4 homoserine acetyltransferase compare
PS417_01855 -5.1 -2.8 phosphoribosyl-AMP cyclohydrolase compare
PS417_04420 -5.0 -8.4 histidinol dehydrogenase compare
PS417_18595 -5.0 -4.6 3-isopropylmalate dehydratase compare
PS417_26890 -4.8 -7.3 dihydroxy-acid dehydratase compare
PS417_02510 -4.8 -3.1 ATP phosphoribosyltransferase regulatory subunit compare
PS417_18560 -4.8 -8.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_23810 -4.6 -9.4 acetolactate synthase 3 catalytic subunit compare
PS417_01565 -4.3 -3.8 imidazole glycerol phosphate synthase compare
PS417_18600 -4.3 -3.2 isopropylmalate isomerase compare
PS417_01850 -4.3 -3.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_20125 -4.3 -3.9 phosphoribosylglycinamide formyltransferase compare
PS417_27835 -4.3 -8.7 endoribonuclease compare
PS417_11705 -4.2 -6.2 cyclic peptide transporter compare
PS417_16465 -4.2 -8.6 sirohydrochlorin ferrochelatase compare
PS417_05595 -4.1 -9.5 ornithine carbamoyltransferase compare
PS417_25715 -4.0 -5.8 anthranilate phosphoribosyltransferase compare
PS417_08220 -3.9 -1.3 epimerase compare
PS417_26995 -3.8 -9.6 phosphoserine phosphatase compare
PS417_23995 -3.8 -1.3 preprotein translocase subunit SecG compare
PS417_23910 -3.7 -3.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PS417_12290 -3.7 -7.0 sulfite reductase compare
PS417_22520 -3.6 -2.3 histidine kinase compare
PS417_18585 -3.6 -5.6 3-isopropylmalate dehydrogenase compare
PS417_01560 -3.3 -2.3 imidazoleglycerol-phosphate dehydratase compare
PS417_26745 -3.3 -6.4 methionine biosynthesis protein MetW compare
PS417_18530 -3.2 -4.3 O-succinylhomoserine sulfhydrylase compare
PS417_23915 -3.2 -2.2 pantoate--beta-alanine ligase compare
PS417_27040 -3.1 -1.6 3-phosphoglycerate dehydrogenase compare
PS417_03260 -2.7 -1.2 5S ribosomal RNA compare
PS417_19800 -2.7 -3.3 flagellar motor switch protein FliG compare
PS417_11700 -2.6 -11.6 ligand-gated channel compare
PS417_22565 -2.6 -0.8 formyltetrahydrofolate deformylase compare
PS417_19805 -2.5 -4.1 flagellar M-ring protein FliF compare
PS417_19755 -2.4 -2.3 flagellar motor switch protein FliM compare
PS417_01580 -2.4 -1.0 imidazole glycerol phosphate synthase compare
PS417_22450 -2.4 -1.3 ATP-dependent DNA helicase RuvA compare
PS417_23545 -2.3 -1.5 gamma-glutamyl kinase compare
PS417_23110 -2.3 -5.2 2-isopropylmalate synthase compare
PS417_21125 -2.2 -5.4 phosphoadenosine phosphosulfate reductase compare
PS417_28140 -2.2 -5.0 asparaginase compare
PS417_25710 -2.2 -1.6 indole-3-glycerol-phosphate synthase compare
PS417_27195 -2.1 -1.4 N-acetylglutamate synthase compare
PS417_26005 -2.1 -7.2 biotin synthase compare
PS417_08155 -2.1 -1.6 integration host factor subunit beta compare
PS417_06375 -2.0 -0.6 deoxycytidine triphosphate deaminase compare
PS417_17610 -1.9 -1.7 AsnC family transcriptional regulator compare
PS417_26000 -1.9 -7.3 8-amino-7-oxononanoate synthase compare
PS417_12855 -1.9 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_27870 -1.8 -2.8 ATP-dependent DNA helicase RecG compare
PS417_26540 -1.8 -7.8 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PS417_00370 -1.8 -1.0 hypothetical protein compare
PS417_25990 -1.8 -5.2 malonyl-CoA O-methyltransferase compare
PS417_02415 -1.8 -3.1 phosphoserine phosphatase compare
PS417_06445 -1.7 -2.2 iron-siderophore ABC transporter permease compare
PS417_15975 -1.7 -2.5 glutamate carboxypeptidase compare
PS417_03560 -1.7 -1.5 GTP-binding protein compare
PS417_04380 -1.7 -0.9 ABC transporter permease compare
PS417_25985 -1.7 -2.3 dethiobiotin synthetase compare
PS417_00180 -1.6 -1.8 tryptophan synthase subunit alpha compare
PS417_02280 -1.6 -1.8 GlcNAc-PI de-N-acetylase compare
PS417_21480 -1.6 -1.1 23S rRNA pseudouridylate synthase compare
PS417_19850 -1.5 -6.0 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_12490 -1.5 -2.0 autotransporter adhesin compare
PS417_01570 -1.5 -0.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_08685 -1.5 -1.5 flagellar hook-length control protein FliK compare
PS417_06600 -1.5 -1.1 leucine/isoleucine/valine transporter ATP-binding subunit compare
PS417_06680 -1.4 -4.2 nuclease PIN compare
PS417_26695 -1.4 -1.4 uracil phosphoribosyltransferase compare
PS417_14515 -1.4 -1.5 acetylglucosaminylphosphatidylinositol deacetylase compare
PS417_08580 -1.4 -4.7 histidine kinase compare
PS417_02560 -1.4 -1.6 23S rRNA methyltransferase compare
PS417_21105 -1.3 -5.5 aminodeoxychorismate synthase compare
PS417_04365 -1.3 -0.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_27865 -1.3 -2.9 LysR family transcriptional regulator compare
PS417_11485 -1.3 -1.8 AraC family transcriptional regulator compare
PS417_06645 -1.3 -5.5 RNA polymerase-associated protein RapA compare
PS417_19675 -1.3 -1.9 chemotaxis protein CheY compare
PS417_08125 -1.3 -0.4 prephenate dehydratase compare
PS417_21510 -1.3 -1.9 histidine kinase compare
PS417_08410 -1.3 -1.8 hypothetical protein compare
PS417_17630 -1.3 -1.9 RNA polymerase sigma factor compare
PS417_01950 -1.3 -4.6 malate dehydrogenase compare
PS417_07420 -1.2 -3.3 restriction endonuclease compare
PS417_22210 -1.2 -1.0 AraC family transcriptional regulator compare
PS417_22445 -1.2 -2.8 ATP-dependent DNA helicase RuvB compare
PS417_17780 -1.2 -1.3 Ais protein compare
PS417_00195 -1.2 -2.2 hypothetical protein compare
PS417_00175 -1.2 -1.2 CigR compare
PS417_24745 -1.2 -0.8 gamma-glutamyl phosphate reductase compare
PS417_23370 -1.2 -2.8 protoheme IX farnesyltransferase compare
PS417_23950 -1.2 -0.9 polynucleotide phosphorylase/polyadenylase compare
PS417_05455 -1.1 -3.8 XRE family transcriptional regulator compare
PS417_09470 -1.1 -1.1 hypothetical protein compare
PS417_24895 -1.1 -1.2 hypothetical protein compare
PS417_02210 -1.1 -3.0 diguanylate cyclase compare
PS417_19605 -1.1 -1.2 hypothetical protein compare
PS417_20160 -1.1 -2.2 cysteine synthase compare
PS417_04425 -1.1 -4.5 histidinol-phosphate aminotransferase compare
PS417_07710 -1.1 -2.7 membrane protein compare
PS417_20855 -1.1 -0.7 hypothetical protein compare
PS417_02555 -1.1 -6.8 exoribonuclease R compare
PS417_24755 -1.1 -3.3 phosphoesterase compare
PS417_23330 -1.1 -2.5 hypothetical protein compare
PS417_27300 -1.1 -0.7 cell division protein ZapA compare
PS417_20715 -1.1 -1.5 cytochrome Cbb3 compare
PS417_19655 -1.0 -2.2 chemotaxis protein CheW compare
PS417_13185 -1.0 -1.5 RND transporter compare
PS417_20985 -1.0 -0.7 porin compare
PS417_19840 -1.0 -6.1 flagellar cap protein FliD compare
PS417_03380 -1.0 -1.1 hypothetical protein compare
PS417_23380 -1.0 -1.4 cytochrome o ubiquinol oxidase subunit III compare
PS417_04975 -1.0 -2.4 response regulator receiver protein compare
PS417_08540 -1.0 -1.7 RNA helicase compare
PS417_15465 -1.0 -2.1 carboxynorspermidine decarboxylase compare
PS417_24835 -1.0 -2.7 hypothetical protein compare
PS417_07400 -1.0 -2.3 hypothetical protein compare
PS417_10025 -1.0 -1.2 bacteriophage lambda NinG family protein compare
PS417_27795 -1.0 -0.3 orotate phosphoribosyltransferase compare
PS417_07170 -1.0 -2.3 hypothetical protein compare
PS417_05650 -1.0 -2.0 leucyl-tRNA synthetase compare
PS417_26990 -1.0 -0.6 RNA pyrophosphohydrolase compare
PS417_02255 -1.0 -1.4 lipopolysaccharide kinase compare
PS417_04960 -1.0 -1.6 hypothetical protein compare
PS417_25380 -1.0 -1.5 hypothetical protein compare
PS417_13545 -0.9 -3.0 arginine aminotransferase compare
PS417_15505 -0.9 -2.3 glutaminase compare
PS417_06685 -0.9 -0.7 beta-ketoadipyl CoA thiolase compare
PS417_07470 -0.9 -0.9 hypothetical protein compare
PS417_03915 -0.9 -2.3 tRNA-Thr compare
PS417_02575 -0.9 -3.3 membrane protein compare
PS417_16000 -0.9 -1.8 chemotaxis protein CheY compare
PS417_18590 -0.9 -2.0 SAM-dependent methyltransferase compare
PS417_23390 -0.9 -3.2 ubiquinol oxidase subunit II compare
PS417_06735 -0.9 -1.6 3-oxoadipate enol-lactonase compare
PS417_09730 -0.9 -2.2 adenylylsulfate kinase compare
PS417_19955 -0.9 -1.3 hypothetical protein compare
PS417_23375 -0.9 -1.1 cytochrome C oxidase compare
PS417_11175 -0.9 -1.8 AraC family transcriptional regulator compare
PS417_24460 -0.9 -1.7 hypothetical protein compare
PS417_16640 -0.9 -3.0 toxin compare
PS417_03465 -0.9 -1.0 type III secretion protein compare
PS417_02225 -0.9 -1.4 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_00355 -0.9 -1.8 metal ABC transporter permease compare
PS417_13050 -0.9 -1.2 N-acetylglucosamine-6-sulfatase compare
PS417_13250 -0.9 -3.4 ABC transporter compare
PS417_24785 -0.9 -1.5 nucleoside-diphosphate sugar epimerase compare
PS417_17560 -0.9 -1.8 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) compare
PS417_15435 -0.9 -2.3 metallophosphatase compare
PS417_04225 -0.8 -2.2 conjugal transfer protein TraR compare
PS417_13255 -0.8 -1.5 ABC transporter compare
PS417_21900 -0.8 -2.6 allophanate hydrolase compare
PS417_21430 -0.8 -1.1 3-oxoacyl-ACP synthase compare
PS417_23900 -0.8 -4.6 poly(A) polymerase compare
PS417_01915 -0.8 -0.4 ATP-dependent protease ATP-binding subunit HslU compare
PS417_24500 -0.8 -1.5 DEAD/DEAH box helicase compare
PS417_07240 -0.8 -2.4 Transcriptional regulator of deoxyribose catabolism (from data) compare
PS417_07440 -0.8 -1.9 cyclic nucleotide-binding protein compare
PS417_06745 -0.8 -1.5 polysaccharide deacetylase compare
PS417_23830 -0.8 -4.6 hypothetical protein compare
PS417_27425 -0.8 -3.6 exopolyphosphatase compare
PS417_26835 -0.8 -1.3 3-mercaptopyruvate sulfurtransferase compare
PS417_09360 -0.8 -3.0 ABC transporter substrate-binding protein compare
PS417_19860 -0.8 -5.8 flagellar hook protein FlgL compare
PS417_01715 -0.8 -0.9 hypothetical protein compare
PS417_26370 -0.8 -1.6 RNA helicase compare
PS417_27595 -0.8 -1.6 recombinase XerC compare
PS417_18965 -0.8 -2.1 dienelactone hydrolase compare
PS417_13855 -0.8 -0.9 acetyl-CoA acetyltransferase compare
PS417_26725 -0.8 -2.1 hypothetical protein compare
PS417_12565 -0.8 -1.2 2-dehydro-3-deoxygluconokinase compare
PS417_21575 -0.8 -3.5 chemotaxis protein compare
PS417_23385 -0.8 -3.2 cytochrome o ubiquinol oxidase subunit I compare
PS417_15540 -0.8 -1.1 NUDIX hydrolase compare
PS417_00345 -0.8 -1.3 copper-binding protein compare
PS417_28230 -0.8 -1.5 transcriptional regulator compare
PS417_03075 -0.8 -2.5 hypothetical protein compare
PS417_16475 -0.8 -1.7 camphor resistance protein CrcB compare
PS417_09915 -0.8 -1.0 hypothetical protein compare
PS417_19350 -0.8 -1.8 GTP cyclohydrolase compare
PS417_07175 -0.8 -2.0 beta-lactamase compare
PS417_23015 -0.8 -2.4 NGG1p interacting factor 3 protein, NIF3 compare
PS417_15895 -0.8 -1.9 iron dicitrate transport regulator FecR compare
PS417_04305 -0.8 -1.1 aspartate ammonia-lyase compare
PS417_10145 -0.8 -1.5 hypothetical protein compare
PS417_18130 -0.8 -1.9 ABC transporter substrate-binding protein compare
PS417_07615 -0.8 -2.1 TetR family transcriptional regulator compare
PS417_18470 -0.7 -2.1 hypothetical protein compare
PS417_17345 -0.7 -1.9 hypothetical protein compare
PS417_05155 -0.7 -1.9 DNA polymerase III subunit chi compare
PS417_20825 -0.7 -1.6 drug:proton antiporter compare
PS417_02060 -0.7 -1.9 FAD-dependent oxidoreductase compare
PS417_14940 -0.7 -1.0 LysR family transcriptional regulator compare


Specific Phenotypes

For 4 genes in this experiment

For phage FRSphage in Pseudomonas simiae WCS417

For phage FRSphage across organisms