Experiment set36S1083 for Pseudomonas simiae WCS417

Compare to:

no phage control

200 most important genes:

  gene name fitness t score description  
PS417_01575 -6.7 -3.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_02510 -6.1 -6.9 ATP phosphoribosyltransferase regulatory subunit compare
PS417_04415 -6.0 -7.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_01565 -5.5 -4.0 imidazole glycerol phosphate synthase compare
PS417_23800 -5.4 -7.4 ketol-acid reductoisomerase compare
PS417_23805 -5.2 -4.7 acetolactate synthase 3 regulatory subunit compare
PS417_20125 -5.0 -3.4 phosphoribosylglycinamide formyltransferase compare
PS417_01855 -4.9 -2.9 phosphoribosyl-AMP cyclohydrolase compare
PS417_04420 -4.8 -7.4 histidinol dehydrogenase compare
PS417_25720 -4.7 -7.7 anthranilate synthase component II compare
PS417_23810 -4.7 -7.2 acetolactate synthase 3 catalytic subunit compare
PS417_18530 -4.4 -6.1 O-succinylhomoserine sulfhydrylase compare
PS417_25725 -4.2 -15.8 anthranilate synthase component I compare
PS417_26995 -4.2 -8.5 phosphoserine phosphatase compare
PS417_18600 -4.2 -4.1 isopropylmalate isomerase compare
PS417_01850 -4.1 -2.8 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_18585 -4.0 -6.6 3-isopropylmalate dehydrogenase compare
PS417_18595 -3.9 -4.8 3-isopropylmalate dehydratase compare
PS417_27835 -3.8 -8.1 endoribonuclease compare
PS417_00185 -3.8 -4.5 tryptophan synthase subunit beta compare
PS417_18560 -3.7 -5.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_25715 -3.7 -5.9 anthranilate phosphoribosyltransferase compare
PS417_23995 -3.6 -1.3 preprotein translocase subunit SecG compare
PS417_26745 -3.4 -7.9 methionine biosynthesis protein MetW compare
PS417_26740 -3.3 -7.2 homoserine acetyltransferase compare
PS417_23910 -3.3 -3.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PS417_05595 -3.2 -6.5 ornithine carbamoyltransferase compare
PS417_16465 -3.2 -8.6 sirohydrochlorin ferrochelatase compare
PS417_11705 -3.1 -5.0 cyclic peptide transporter compare
PS417_26890 -3.0 -5.2 dihydroxy-acid dehydratase compare
PS417_23915 -2.9 -2.0 pantoate--beta-alanine ligase compare
PS417_16490 -2.9 -1.4 cell division protein FtsK compare
PS417_27040 -2.9 -1.6 3-phosphoglycerate dehydrogenase compare
PS417_19065 -2.8 -1.4 monooxygenase compare
PS417_22990 -2.6 -1.6 iron dicitrate transport regulator FecR compare
PS417_27585 -2.5 -2.7 diaminopimelate epimerase compare
PS417_25710 -2.4 -1.5 indole-3-glycerol-phosphate synthase compare
PS417_12290 -2.4 -4.2 sulfite reductase compare
PS417_08025 -2.4 -1.8 acetylornithine aminotransferase compare
PS417_25985 -2.4 -2.5 dethiobiotin synthetase compare
PS417_22565 -2.4 -0.8 formyltetrahydrofolate deformylase compare
PS417_01580 -2.3 -1.0 imidazole glycerol phosphate synthase compare
PS417_01915 -2.3 -0.8 ATP-dependent protease ATP-binding subunit HslU compare
PS417_15285 -2.3 -1.4 type VI secretion protein compare
PS417_02415 -2.3 -2.7 phosphoserine phosphatase compare
PS417_26725 -2.2 -4.7 hypothetical protein compare
PS417_19675 -2.2 -3.8 chemotaxis protein CheY compare
PS417_23545 -2.1 -1.4 gamma-glutamyl kinase compare
PS417_06540 -2.1 -2.0 membrane protein compare
PS417_27870 -2.0 -2.7 ATP-dependent DNA helicase RecG compare
PS417_08220 -2.0 -1.0 epimerase compare
PS417_01560 -2.0 -2.3 imidazoleglycerol-phosphate dehydratase compare
PS417_12855 -2.0 -4.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_27195 -1.9 -1.3 N-acetylglutamate synthase compare
PS417_01570 -1.9 -1.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_03100 -1.8 -1.3 pilus assembly protein compare
PS417_21125 -1.8 -4.4 phosphoadenosine phosphosulfate reductase compare
PS417_18425 -1.7 -1.5 sporulation protein compare
PS417_23110 -1.7 -5.4 2-isopropylmalate synthase compare
PS417_00180 -1.7 -1.8 tryptophan synthase subunit alpha compare
PS417_19350 -1.7 -2.8 GTP cyclohydrolase compare
PS417_13185 -1.7 -2.4 RND transporter compare
PS417_11700 -1.7 -6.1 ligand-gated channel compare
PS417_26005 -1.6 -5.8 biotin synthase compare
PS417_26985 -1.6 -2.9 phosphoenolpyruvate-protein phosphotransferase compare
PS417_26540 -1.6 -6.8 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PS417_12565 -1.6 -1.7 2-dehydro-3-deoxygluconokinase compare
PS417_04380 -1.5 -0.9 ABC transporter permease compare
PS417_28140 -1.5 -2.7 asparaginase compare
PS417_16715 -1.5 -2.0 DoxX family protein compare
PS417_26000 -1.5 -5.0 8-amino-7-oxononanoate synthase compare
PS417_04385 -1.5 -1.9 organic solvent ABC transporter substrate-binding protein compare
PS417_19850 -1.5 -6.3 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
PS417_06685 -1.4 -0.9 beta-ketoadipyl CoA thiolase compare
PS417_16400 -1.4 -2.3 NAD(P)H-quinone oxidoreductase compare
PS417_13205 -1.4 -1.5 isochorismate-pyruvate lyase compare
PS417_00650 -1.4 -1.0 LysR family transcriptional regulator compare
PS417_01950 -1.4 -4.1 malate dehydrogenase compare
PS417_25990 -1.4 -4.5 malonyl-CoA O-methyltransferase compare
PS417_03260 -1.4 -0.7 5S ribosomal RNA compare
PS417_06145 -1.4 -0.8 hypothetical protein compare
PS417_19655 -1.3 -2.8 chemotaxis protein CheW compare
PS417_14605 -1.3 -2.5 adenylate kinase compare
PS417_08135 -1.3 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_08245 -1.3 -0.9 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_20610 -1.3 -1.2 hypothetical protein compare
PS417_02280 -1.3 -1.2 GlcNAc-PI de-N-acetylase compare
PS417_01095 -1.3 -1.4 amino acid ABC transporter ATP-binding protein compare
PS417_06645 -1.2 -6.1 RNA polymerase-associated protein RapA compare
PS417_24500 -1.2 -2.4 DEAD/DEAH box helicase compare
PS417_20855 -1.2 -0.6 hypothetical protein compare
PS417_26850 -1.2 -0.7 twin-arginine translocation pathway signal protein compare
PS417_22450 -1.2 -1.0 ATP-dependent DNA helicase RuvA compare
PS417_21360 -1.2 -1.0 termination factor Rho compare
PS417_21105 -1.2 -5.4 aminodeoxychorismate synthase compare
PS417_19275 -1.2 -1.1 hypothetical protein compare
PS417_08125 -1.2 -0.4 prephenate dehydratase compare
PS417_08685 -1.2 -1.3 flagellar hook-length control protein FliK compare
PS417_10025 -1.1 -1.4 bacteriophage lambda NinG family protein compare
PS417_05025 -1.1 -1.9 maleylacetoacetate isomerase compare
PS417_04835 -1.1 -2.1 hemolysin D compare
PS417_05500 -1.1 -2.2 2,3-diketo-5-methylthio-1-phosphopentane phosphatase compare
PS417_20160 -1.1 -2.0 cysteine synthase compare
PS417_24115 -1.1 -1.7 hypothetical protein compare
PS417_21430 -1.1 -1.1 3-oxoacyl-ACP synthase compare
PS417_08825 -1.1 -2.2 TetR family transcriptional regulator compare
PS417_13425 -1.1 -1.2 cupin compare
PS417_24745 -1.1 -0.7 gamma-glutamyl phosphate reductase compare
PS417_19955 -1.1 -1.5 hypothetical protein compare
PS417_11535 -1.1 -1.9 nicotinate phosphoribosyltransferase compare
PS417_05860 -1.1 -3.0 hypothetical protein compare
PS417_21655 -1.1 -1.0 aspartate kinase compare
PS417_06680 -1.0 -2.6 nuclease PIN compare
PS417_05455 -1.0 -3.9 XRE family transcriptional regulator compare
PS417_02555 -1.0 -6.5 exoribonuclease R compare
PS417_26370 -1.0 -2.1 RNA helicase compare
PS417_24785 -1.0 -1.2 nucleoside-diphosphate sugar epimerase compare
PS417_08150 -1.0 -2.9 hypothetical protein compare
PS417_14755 -1.0 -1.3 UV damage repair endonuclease UvdE compare
PS417_09730 -1.0 -2.3 adenylylsulfate kinase compare
PS417_13895 -1.0 -2.0 chemotaxis protein CheB compare
PS417_19665 -1.0 -2.4 flagellar motor protein MotD compare
PS417_05905 -1.0 -1.7 hypothetical protein compare
PS417_10185 -1.0 -1.9 hypothetical protein compare
PS417_16475 -1.0 -1.9 camphor resistance protein CrcB compare
PS417_23025 -1.0 -2.4 murein transglycosylase compare
PS417_16455 -1.0 -3.3 hypothetical protein compare
PS417_23375 -1.0 -1.1 cytochrome C oxidase compare
PS417_20705 -0.9 -2.4 cbb3-type cytochrome c oxidase subunit II compare
PS417_18640 -0.9 -2.8 hydrolase compare
PS417_00590 -0.9 -1.8 5S ribosomal RNA compare
PS417_22445 -0.9 -1.4 ATP-dependent DNA helicase RuvB compare
PS417_08940 -0.9 -2.2 thioesterase compare
PS417_04440 -0.9 -1.7 hypoxanthine-guanine phosphoribosyltransferase compare
PS417_19840 -0.9 -5.8 flagellar cap protein FliD compare
PS417_05165 -0.9 -2.9 cytosol aminopeptidase compare
PS417_20985 -0.9 -0.6 porin compare
PS417_05155 -0.9 -2.3 DNA polymerase III subunit chi compare
PS417_16665 -0.9 -1.2 hypothetical protein compare
PS417_27795 -0.9 -0.3 orotate phosphoribosyltransferase compare
PS417_22175 -0.9 -1.3 amino acid transporter LysE compare
PS417_15325 -0.9 -1.0 type VI secretion protein compare
PS417_07870 -0.9 -1.7 hypothetical protein compare
PS417_21575 -0.9 -3.5 chemotaxis protein compare
PS417_10015 -0.9 -0.8 hypothetical protein compare
PS417_08435 -0.9 -1.4 pilus assembly protein PilZ compare
PS417_25290 -0.9 -2.2 hypothetical protein compare
PS417_27940 -0.9 -1.6 type VI secretion protein compare
PS417_11760 -0.9 -2.3 Fis family transcriptional regulator compare
PS417_06745 -0.9 -1.0 polysaccharide deacetylase compare
PS417_23390 -0.9 -2.7 ubiquinol oxidase subunit II compare
PS417_25815 -0.8 -1.9 magnesium transporter ApaG compare
PS417_23105 -0.8 -1.2 hypothetical protein compare
PS417_11000 -0.8 -2.0 L-arabonate dehydratase (EC 4.2.1.25) (from data) compare
PS417_02210 -0.8 -1.8 diguanylate cyclase compare
PS417_19270 -0.8 -1.8 hypothetical protein compare
PS417_21625 -0.8 -0.7 DNA-binding protein compare
PS417_22085 -0.8 -1.1 aldehyde dehydrogenase compare
PS417_19800 -0.8 -0.7 flagellar motor switch protein FliG compare
PS417_23900 -0.8 -3.6 poly(A) polymerase compare
PS417_25155 -0.8 -1.0 hypothetical protein compare
PS417_14295 -0.8 -1.7 AraC family transcriptional regulator compare
PS417_24535 -0.8 -1.6 membrane protein compare
PS417_27110 -0.8 -2.1 spermidine/putrescine ABC transporter permease compare
PS417_05865 -0.8 -0.8 hypothetical protein compare
PS417_14600 -0.8 -1.7 bleomycin resistance protein compare
PS417_17410 -0.8 -3.7 membrane protein compare
PS417_28275 -0.8 -2.1 cobalamin biosynthesis protein CobW compare
PS417_17340 -0.8 -2.0 GNAT family acetyltransferase compare
PS417_26990 -0.8 -0.5 RNA pyrophosphohydrolase compare
PS417_23370 -0.8 -1.6 protoheme IX farnesyltransferase compare
PS417_10125 -0.8 -1.1 hypothetical protein compare
PS417_13755 -0.8 -1.4 oxidoreductase compare
PS417_14540 -0.7 -1.0 cytochrome C oxidase subunit III compare
PS417_07245 -0.7 -1.5 2-deoxy-D-ribonate 3-dehydrogenase (from data) compare
PS417_27425 -0.7 -3.6 exopolyphosphatase compare
PS417_19755 -0.7 -1.1 flagellar motor switch protein FliM compare
PS417_26695 -0.7 -0.7 uracil phosphoribosyltransferase compare
PS417_02885 -0.7 -1.9 hypothetical protein compare
PS417_09695 -0.7 -1.5 hydrolase compare
PS417_11615 -0.7 -0.9 urea ABC transporter ATP-binding protein compare
PS417_08580 -0.7 -1.9 histidine kinase compare
PS417_10685 -0.7 -2.3 acyl-CoA dehydrogenase compare
PS417_23380 -0.7 -1.4 cytochrome o ubiquinol oxidase subunit III compare
PS417_11055 -0.7 -1.3 AraC family transcriptional regulator compare
PS417_13640 -0.7 -1.3 ribose ABC transporter permease compare
PS417_18540 -0.7 -1.0 colicin V production CvpA compare
PS417_14870 -0.7 -2.5 transporter compare
PS417_07710 -0.7 -1.6 membrane protein compare
PS417_25765 -0.7 -1.2 transcriptional regulator compare
PS417_15030 -0.7 -0.8 short-chain dehydrogenase compare
PS417_22580 -0.7 -1.5 membrane protein compare
PS417_01270 -0.7 -1.0 iron ABC transporter substrate-binding protein compare
PS417_02990 -0.7 -1.9 hypothetical protein compare
PS417_05810 -0.7 -1.7 damage-inducible protein CinA compare
PS417_10725 -0.7 -2.4 excinuclease ABC subunit C compare
PS417_26685 -0.7 -1.8 hypothetical protein compare
PS417_04425 -0.7 -3.1 histidinol-phosphate aminotransferase compare
PS417_15540 -0.7 -0.7 NUDIX hydrolase compare
PS417_07015 -0.7 -2.1 helicase compare


Specific Phenotypes

For 3 genes in this experiment