Experiment set36IT082 for Pseudomonas putida KT2440

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Genes with specific phenotypes:

  gene name fitness t score description  
PP_1202 -5.1 -19.6 putative enzyme involved in modification of phospholipids conserved
PP_1201 -5.0 -9.0 conserved exported protein of unknown function compare
PP_5218 -4.8 -7.7 DedA family protein compare
PP_4755 -3.8 -20.4 Outer membrane ferrichrome-iron receptor compare
PP_1695 -3.4 -9.0 putative Sodium-solute symporter/sensory box histidine kinase/response regulator compare
PP_0188 -3.1 -5.3 putative Uroporphyrin-III C-methyltransferase compare
PP_1460 -3.1 -11.2 putative Membrane protein compare
PP_4610 -3.1 -10.6 conserved protein of unknown function containing PepSY-associated TM helix domain conserved
PP_1082 -2.9 -5.9 bacterioferritin compare
PP_4609 -2.9 -5.6 conserved membrane protein of unknown function compare
PP_0704 -2.8 -5.1 RNA polymerase sigma-70 factor, ECF subfamily compare
PP_1078 -2.8 -7.6 putative ABC transporter, ATP-binding protein compare
PP_5026 -2.7 -9.8 Glucans biosynthesis protein G compare
PP_0908 -2.6 -8.1 conserved exported protein of unknown function compare
PP_0111 -2.6 -7.4 Electron transport protein SCO1/SenC compare
PP_1034 -2.5 -12.5 multicopper oxidase compare
PP_4882 -2.5 -9.8 Iron ABC transporter, permease protein conserved
PP_1238 -2.5 -6.7 putative Lipoprotein compare
PP_0247 -2.4 -10.9 Osmolarity sensor protein EnvZ compare
PP_1083 -2.4 -6.6 (2Fe-2S)-binding protein compare
PP_1918 -2.4 -11.2 septation protein compare
PP_4150 -2.4 -5.1 microcin C transporter - ATP binding subunit conserved
PP_1587 -2.3 -8.4 NhaP-type Na+/H+ and K+/H+ antiporters compare
PP_4264 -2.2 -7.1 oxygen-independent coproporphyrinogen III dehydrogenase compare
PP_1262 -2.1 -9.4 LysR family transcriptional regulator conserved
PP_4881 -2.1 -9.6 putative Iron ABC transporter, periplasmic iron-binding protein conserved
PP_0909 -2.1 -7.7 conserved exported protein of unknown function compare
PP_5025 -2.0 -6.8 Glucans biosynthesis glucosyltransferase H compare
PP_0482 -2.0 -5.8 bacterioferritin compare
PP_4592 -2.0 -12.5 putative metal dependent hydrolase compare
PP_4980 -1.9 -7.4 ATP-dependent RNA helicase compare
PP_0154 -1.8 -11.8 Succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18) (from data) compare
PP_5092 -1.8 -6.5 putative exported NLP/P60 protein conserved
PP_1871 -1.8 -5.1 Protease HtpX compare
PP_2148 -1.7 -8.1 transcription-repair coupling factor compare
PP_2098 -1.7 -5.4 D-alanyl-D-alanine carboxypeptidase compare
PP_0118 -1.7 -5.4 zinc import ATP-binding protein compare
PP_2005 -1.7 -5.3 conserved exported protein of unknown function compare
PP_1737 -1.5 -8.2 conserved protein of unknown function compare
PP_0707 -1.4 -5.1 putative membrane protein compare
PP_4805 -1.4 -6.1 membrane-bound lytic murein transglycosylase B compare
PP_4149 -1.4 -6.5 putative inner membrane ABC transporter permease protein compare
PP_3794 -1.4 -6.0 periplasmic murein D-alanyl-D-alanine endopeptidase compare
PP_5365 -1.3 -7.1 putative fatty acid methyltransferase conserved
PP_0902 -1.3 -6.6 integral membrane sensor signal transduction histidine kinase compare
PP_1738 -1.2 -5.0 conserved exported protein of unknown function compare
PP_3300 -1.2 -5.9 Transcriptional regulator, tetR family compare
PP_3453 -1.2 -5.2 putative Sensor protein RstB compare
PP_4148 -1.1 -5.5 putative inner membrane ABC transporter permease protein conserved
PP_4147 -1.1 -5.6 microcin C transporter - periplasmic binding protein conserved
PP_4838 -1.1 -6.0 Outer membrane copper receptor OprC compare
PP_0943 +1.1 5.3 conserved protein of unknown function compare
PP_1295 +1.1 6.7 ATP-dependent RNA helicase RhlB compare
PP_4868 +1.4 5.9 Nicotinate phosphoribosyltransferase compare
PP_0904 +1.4 7.6 InaA protein compare
PP_3428 +1.5 6.2 conserved protein of unknown function containing tetratricopeptide repeat domain compare
PP_1666 +1.6 7.4 conserved exported protein of unknown function compare
PP_1058 +1.6 12.3 conserved protein of unknown function compare
PP_1427 +1.8 9.4 RNA polymerase sigma E factor compare
PP_4570 +1.9 11.2 conserved protein of unknown function compare
PP_1006 +2.1 15.9 putative outer membrane heme receptor compare
PP_2900 +2.6 5.1 conserved protein of unknown function compare
PP_1185 +4.5 16.7 Outer membrane protein H1 compare
PP_0351 +5.4 10.1 putative Transmembrane sensor protein compare


Specific phenotypes for supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms