Experiment set36IT081 for Pseudomonas putida KT2440

Compare to:

Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Genes with specific phenotypes:

  gene name fitness t score description  
PP_1202 -5.1 -20.7 putative enzyme involved in modification of phospholipids conserved
PP_1201 -4.1 -7.1 conserved exported protein of unknown function compare
PP_5218 -3.9 -7.6 DedA family protein compare
PP_4755 -3.6 -19.7 Outer membrane ferrichrome-iron receptor compare
PP_0704 -3.3 -6.0 RNA polymerase sigma-70 factor, ECF subfamily compare
PP_1083 -3.0 -7.3 (2Fe-2S)-binding protein compare
PP_5026 -2.9 -12.6 Glucans biosynthesis protein G compare
PP_1695 -2.8 -9.6 putative Sodium-solute symporter/sensory box histidine kinase/response regulator compare
PP_4610 -2.6 -13.1 conserved protein of unknown function containing PepSY-associated TM helix domain conserved
PP_2449 -2.5 -6.7 conserved protein of unknown function compare
PP_1918 -2.5 -11.4 septation protein compare
PP_1082 -2.4 -5.4 bacterioferritin compare
PP_1078 -2.4 -9.0 putative ABC transporter, ATP-binding protein compare
PP_1460 -2.4 -11.7 putative Membrane protein compare
PP_5025 -2.4 -12.0 Glucans biosynthesis glucosyltransferase H compare
PP_0908 -2.3 -8.1 conserved exported protein of unknown function compare
PP_1034 -2.2 -11.2 multicopper oxidase compare
PP_0909 -2.2 -8.4 conserved exported protein of unknown function compare
PP_1843 -2.1 -5.0 Mg2+/Co2+ transporter compare
PP_4264 -2.1 -8.6 oxygen-independent coproporphyrinogen III dehydrogenase compare
PP_0188 -2.1 -5.1 putative Uroporphyrin-III C-methyltransferase compare
PP_4882 -2.0 -10.1 Iron ABC transporter, permease protein conserved
PP_1451 -2.0 -5.5 conserved exported protein of unknown function compare
PP_1587 -1.9 -9.0 NhaP-type Na+/H+ and K+/H+ antiporters compare
PP_5365 -1.9 -11.5 putative fatty acid methyltransferase conserved
PP_0482 -1.9 -7.8 bacterioferritin compare
PP_1262 -1.8 -10.6 LysR family transcriptional regulator conserved
PP_2098 -1.8 -9.1 D-alanyl-D-alanine carboxypeptidase compare
PP_2148 -1.8 -10.7 transcription-repair coupling factor compare
PP_0111 -1.7 -6.5 Electron transport protein SCO1/SenC compare
PP_4592 -1.7 -11.8 putative metal dependent hydrolase compare
PP_1646 -1.7 -5.3 putative Thioredoxin compare
PP_4881 -1.6 -9.8 putative Iron ABC transporter, periplasmic iron-binding protein conserved
PP_1871 -1.6 -5.6 Protease HtpX compare
PP_0154 -1.5 -11.2 Succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18) (from data) compare
PP_0707 -1.5 -5.4 putative membrane protein compare
PP_3300 -1.5 -6.6 Transcriptional regulator, tetR family compare
PP_5092 -1.4 -6.3 putative exported NLP/P60 protein conserved
PP_0247 -1.4 -6.1 Osmolarity sensor protein EnvZ compare
PP_4478 -1.4 -7.4 N-succinylglutamate 5-semialdehyde dehydrogenase compare
PP_3794 -1.3 -7.9 periplasmic murein D-alanyl-D-alanine endopeptidase compare
PP_2005 -1.3 -5.0 conserved exported protein of unknown function compare
PP_0902 -1.3 -6.6 integral membrane sensor signal transduction histidine kinase compare
PP_0189 -1.3 -5.1 putative heme biosynthesis protein compare
PP_4149 -1.1 -5.5 putative inner membrane ABC transporter permease protein compare
PP_1429 -1.0 -5.4 Sigma factor AlgU regulatory protein MucB compare
PP_4868 +1.2 6.6 Nicotinate phosphoribosyltransferase compare
PP_1427 +1.3 7.6 RNA polymerase sigma E factor compare
PP_0904 +1.4 7.9 InaA protein compare
PP_4570 +1.6 12.2 conserved protein of unknown function compare
PP_1058 +1.6 13.3 conserved protein of unknown function compare
PP_1006 +1.8 15.0 putative outer membrane heme receptor compare
PP_2900 +2.1 6.3 conserved protein of unknown function compare
PP_1185 +3.8 15.2 Outer membrane protein H1 compare
PP_0351 +4.8 10.9 putative Transmembrane sensor protein compare


Specific phenotypes for supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered across organisms