| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -10.1 | -7.0 | alanine racemase (NCBI) | compare |
| b3035 | tolC | -9.0 | -8.8 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1855 | lpxM | -7.6 | -8.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0222 | lpcA | -7.5 | -3.7 | phosphoheptose isomerase (NCBI) | compare |
| b1850 | eda | -7.4 | -2.4 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b3052 | rfaE | -7.0 | -8.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3621 | rfaC | -6.9 | -4.8 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3839 | tatC | -6.9 | -18.7 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3341 | rpsG | -6.9 | -2.0 | 30S ribosomal protein S7 (NCBI) | compare |
| b3619 | rfaD | -6.8 | -4.7 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1192 | ldcA | -6.7 | -5.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b1236 | galU | -6.4 | -4.4 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2620 | smpB | -6.4 | -2.1 | SsrA-binding protein (NCBI) | compare |
| b0737 | tolQ | -6.2 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3183 | obgE | -6.2 | -2.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0739 | tolA | -6.0 | -4.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3613 | yibP | -5.9 | -4.1 | putative membrane protein (VIMSS) | compare |
| b0741 | pal | -5.9 | -7.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4042 | dgkA | -5.8 | -3.3 | diacylglycerol kinase (NCBI) | compare |
| b1863 | ruvC | -5.6 | -2.8 | Holliday junction resolvase (NCBI) | compare |
| b0740 | tolB | -5.6 | -9.4 | translocation protein TolB precursor (NCBI) | compare |
| b0688 | pgm | -5.1 | -7.3 | phosphoglucomutase (NCBI) | compare |
| b3631 | rfaG | -5.1 | -24.7 | glucosyltransferase I (NCBI) | compare |
| b0200 | gmhB | -5.0 | -2.4 | hypothetical protein (NCBI) | compare |
| b3816 | corA | -4.9 | -13.2 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b0738 | tolR | -4.8 | -6.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2528 | iscA | -4.7 | -2.1 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1860 | ruvB | -4.5 | -1.7 | Holliday junction DNA helicase B (NCBI) | compare |
| b0142 | folK | -4.3 | -0.7 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3620 | rfaF | -4.2 | -9.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3261 | fis | -4.2 | -2.8 | DNA-binding protein Fis (NCBI) | compare |
| b1861 | ruvA | -4.1 | -1.5 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3838 | tatB | -4.1 | -7.1 | sec-independent translocase (NCBI) | compare |
| b2699 | recA | -4.0 | -2.1 | recombinase A (NCBI) | compare |
| b4402 | yjjY | -4.0 | -1.3 | hypothetical protein (NCBI) | compare |
| b3811 | xerC | -4.0 | -2.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3792 | wzxE | -3.9 | -12.0 | O-antigen translocase (NCBI) | compare |
| b0630 | lipB | -3.8 | -3.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3979 | thrT | -3.7 | -0.6 | tRNA-Thr (NCBI) | compare |
| b3728 | pstS | -3.7 | -6.6 | phosphate transporter subunit (NCBI) | compare |
| b3741 | gidA | -3.5 | -11.3 | glucose-inhibited division protein A (NCBI) | compare |
| b0902 | pflA | -3.5 | -7.2 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0463 | acrA | -3.5 | -10.8 | multidrug efflux system (NCBI) | compare |
| b3229 | sspA | -3.5 | -5.4 | stringent starvation protein A (NCBI) | compare |
| b4375 | prfC | -3.5 | -9.5 | peptide chain release factor 3 (NCBI) | compare |
| b1291 | sapD | -3.5 | -2.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1936 | intG | -3.4 | -1.1 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1677 | lpp | -3.4 | -2.0 | murein lipoprotein (NCBI) | compare |
| b0683 | fur | -3.4 | -2.2 | ferric uptake regulator (NCBI) | compare |
| b0053 | surA | -3.4 | -7.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0890 | ftsK | -3.4 | -10.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2894 | xerD | -3.3 | -1.2 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3706 | trmE | -3.3 | -8.5 | tRNA modification GTPase (NCBI) | compare |
| b2820 | recB | -3.1 | -2.1 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0903 | pflB | -3.1 | -13.6 | pyruvate formate lyase I (NCBI) | compare |
| b0439 | lon | -3.0 | -6.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2531 | iscR | -3.0 | -1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2158 | yeiH | -2.9 | -8.5 | conserved inner membrane protein (NCBI) | compare |
| b1025 | ycdT | -2.9 | -2.5 | predicted diguanylate cyclase (NCBI) | compare |
| b1175 | minD | -2.9 | -6.9 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2567 | rnc | -2.9 | -1.1 | ribonuclease III (NCBI) | compare |
| b2846 | yqeH | -2.8 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4503 | yafF | -2.8 | -0.9 | no description | compare |
| b3405 | ompR | -2.8 | -4.4 | osmolarity response regulator (NCBI) | compare |
| b0114 | aceE | -2.8 | -3.4 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b2318 | truA | -2.7 | -3.8 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1334 | fnr | -2.7 | -2.5 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b4177 | purA | -2.7 | -1.9 | adenylosuccinate synthetase (NCBI) | compare |
| b1129 | phoQ | -2.7 | -1.8 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b1176 | minC | -2.6 | -2.6 | septum formation inhibitor (NCBI) | compare |
| b3162 | deaD | -2.6 | -6.2 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b4146 | yjeK | -2.6 | -4.1 | predicted lysine aminomutase (NCBI) | compare |
| b2297 | pta | -2.6 | -1.2 | phosphate acetyltransferase (NCBI) | compare |
| b3725 | pstB | -2.6 | -1.8 | phosphate transporter subunit (NCBI) | compare |
| b1476 | fdnI | -2.6 | -1.1 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b3977 | tyrU | -2.5 | -1.1 | tRNA-Tyr (NCBI) | compare |
| b2830 | nudH | -2.5 | -1.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2935 | tktA | -2.5 | -4.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0145 | dksA | -2.5 | -3.8 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2188 | yejM | -2.5 | -8.7 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3933 | ftsN | -2.5 | -9.9 | essential cell division protein (NCBI) | compare |
| b3778 | rep | -2.5 | -8.3 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3627 | rfaI | -2.4 | -10.9 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b4702 | mgtL | -2.4 | -2.8 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3082 | ygjM | -2.3 | -2.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0949 | uup | -2.3 | -6.8 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2569 | lepA | -2.3 | -5.3 | GTP-binding protein LepA (NCBI) | compare |
| b3726 | pstA | -2.3 | -6.6 | phosphate transporter subunit (NCBI) | compare |
| b1241 | adhE | -2.3 | -9.1 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b2330 | yfcB | -2.3 | -2.1 | putative adenine-specific methylase (VIMSS) | compare |
| b3916 | pfkA | -2.3 | -4.9 | 6-phosphofructokinase (NCBI) | compare |
| b4155 | yjeA | -2.3 | -1.1 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b2822 | recC | -2.2 | -6.8 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b3628 | rfaB | -2.2 | -10.0 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b0658 | ybeX | -2.2 | -1.5 | predicteed ion transport (NCBI) | compare |
| b0462 | acrB | -2.2 | -14.3 | multidrug efflux system protein (NCBI) | compare |
| b2501 | ppk | -2.1 | -8.4 | polyphosphate kinase (NCBI) | compare |
| b3961 | oxyR | -2.1 | -9.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2859 | ygeO | -2.1 | -2.2 | hypothetical protein (RefSeq) | compare |
| b3867 | hemN | -2.1 | -10.7 | O2-independent coproporphyrinogen III oxidase (VIMSS) | compare |
| b3500 | gor | -2.1 | -2.3 | glutathione reductase (NCBI) | compare |
| b1830 | prc | -2.1 | -5.8 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0605 | ahpC | -2.0 | -3.6 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b0730 | mngR | -2.0 | -2.3 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b2576 | srmB | -2.0 | -3.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b3199 | yrbK | -2.0 | -2.4 | hypothetical protein (NCBI) | compare |
| b3836 | b3836 | -1.9 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b4546 | ypeB | -1.9 | -1.3 | hypothetical protein (NCBI) | compare |
| b1130 | phoP | -1.9 | -3.0 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2808 | gcvA | -1.8 | -3.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0908 | aroA | -1.8 | -7.1 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3842 | rfaH | -1.8 | -5.1 | transcriptional activator RfaH (NCBI) | compare |
| b0401 | brnQ | -1.8 | -7.8 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |
| b4171 | miaA | -1.8 | -3.5 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b4202 | rpsR | -1.8 | -1.6 | 30S ribosomal protein S18 (NCBI) | compare |
| b1292 | sapC | -1.8 | -3.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3863 | polA | -1.8 | -1.3 | DNA polymerase I (NCBI) | compare |
| b2038 | rfbC | -1.7 | -7.0 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b4179 | vacB | -1.7 | -5.3 | putative enzyme (VIMSS) | compare |
| b1160 | elbA | -1.7 | -1.2 | hypothetical protein (NCBI) | compare |
| b3210 | arcB | -1.7 | -5.6 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b1269 | rluB | -1.7 | -3.7 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b4203 | rplI | -1.7 | -4.0 | 50S ribosomal protein L9 (NCBI) | compare |
| b0088 | murD | -1.7 | -2.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b3462 | ftsX | -1.7 | -8.4 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3237 | argR | -1.6 | -3.7 | arginine repressor (NCBI) | compare |
| b0746 | valZ | -1.6 | -2.2 | tRNA-Val (NCBI) | compare |
| b3652 | recG | -1.6 | -7.0 | ATP-dependent DNA helicase (NCBI) | compare |
| b2652 | ileY | -1.6 | -0.9 | tRNA-Ile (NCBI) | compare |
| b0759 | galE | -1.6 | -5.5 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b1126 | potA | -1.6 | -5.1 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b3386 | rpe | -1.6 | -1.9 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b2476 | purC | -1.5 | -2.8 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b4477 | dgoA | -1.5 | -2.9 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (NCBI) | compare |
| b1545 | pinQ | -1.5 | -0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b3857 | mobA | -1.5 | -6.8 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b1332 | ynaJ | -1.5 | -0.6 | predicted inner membrane protein (NCBI) | compare |
| b3636 | rpmG | -1.5 | -2.3 | 50S ribosomal protein L33 (NCBI) | compare |
| b0523 | purE | -1.5 | -4.0 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b1124 | potC | -1.4 | -4.9 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1691 | ydiN | -1.4 | -3.8 | predicted transporter (RefSeq) | compare |
| b3612 | gpmI | -1.4 | -10.0 | phosphoglyceromutase (NCBI) | compare |
| b0406 | tgt | -1.4 | -3.6 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b0149 | mrcB | -1.4 | -8.8 | penicillin-binding protein 1b (NCBI) | compare |
| b4651 | yibW | -1.4 | -0.5 | no description | compare |
| b2446 | yffO | -1.4 | -1.7 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b1290 | sapF | -1.4 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3032 | cpdA | -1.4 | -6.8 | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | compare |
| b3600 | mtlD | -1.4 | -5.1 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b3164 | pnp | -1.4 | -2.5 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4066 | yjcF | -1.4 | -0.5 | hypothetical protein (NCBI) | compare |
| b4025 | pgi | -1.4 | -7.3 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2157 | yeiE | -1.4 | -3.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0009 | mog | -1.4 | -7.6 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b1676 | pykF | -1.3 | -2.8 | pyruvate kinase (NCBI) | compare |
| b2329 | aroC | -1.3 | -3.7 | chorismate synthase (NCBI) | compare |
| b1125 | potB | -1.3 | -2.3 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2040 | rfbD | -1.3 | -7.7 | dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) | compare |
| b1123 | potD | -1.3 | -4.5 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b3871 | bipA | -1.3 | -7.5 | GTP-binding protein (NCBI) | compare |
| b2163 | yeiL | -1.3 | -3.6 | putative transcriptional regulator (VIMSS) | compare |
| b3463 | ftsE | -1.3 | -0.9 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0484 | copA | -1.3 | -8.6 | copper transporter (NCBI) | compare |
| b4685 | yrbN | -1.3 | -1.8 | expressed protein (RefSeq) | compare |
| b1007 | b1007 | -1.3 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1095 | fabF | -1.3 | -4.6 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b0015 | dnaJ | -1.3 | -6.2 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b3226 | yhcK | -1.3 | -4.7 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b3609 | secB | -1.3 | -4.6 | export protein SecB (NCBI) | compare |
| b3260 | dusB | -1.3 | -3.9 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b3404 | envZ | -1.3 | -5.9 | osmolarity sensor protein (NCBI) | compare |
| b1921 | fliZ | -1.2 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2314 | dedD | -1.2 | -2.9 | putative lipoprotein (VIMSS) | compare |
| b0785 | moaE | -1.2 | -3.8 | molybdopterin synthase, large subunit (NCBI) | compare |
| b4178 | yjeB | -1.2 | -3.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2156 | lysP | -1.2 | -5.6 | lysine transporter (NCBI) | compare |
| b4322 | uxuA | -1.2 | -5.6 | mannonate dehydratase (NCBI) | compare |
| b2564 | pdxJ | -1.2 | -2.8 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b4458 | oxyS | -1.2 | -1.3 | global regulatory RNA (NCBI) | compare |
| b2444 | yffM | -1.2 | -1.9 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0019 | nhaA | -1.2 | -5.5 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b2948 | yqgE | -1.2 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1304 | pspA | -1.2 | -2.9 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b0678 | nagB | -1.2 | -4.2 | glucosamine-6-phosphate deaminase (NCBI) | compare |
| b2136 | yohD | -1.2 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1976 | b1976 | -1.2 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1187 | fadR | -1.2 | -2.3 | fatty acid metabolism regulator (NCBI) | compare |
| b3629 | rfaS | -1.2 | -2.7 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4590 | ybfK | -1.2 | -1.4 | hypothetical protein (RefSeq) | compare |
| b2892 | recJ | -1.2 | -6.5 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b3624 | rfaZ | -1.2 | -2.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2284 | nuoF | -1.2 | -4.1 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0049 | apaH | -1.2 | -2.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b3930 | menA | -1.2 | -8.0 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b0407 | yajC | -1.1 | -2.6 | preprotein translocase subunit YajC (NCBI) | compare |
| b3781 | trxA | -1.1 | -2.7 | thioredoxin 1 (VIMSS) | compare |
| b1048 | mdoG | -1.1 | -4.1 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b2064 | asmA | -1.1 | -5.3 | predicted assembly protein (NCBI) | compare |
| b3761 | trpT | -1.1 | -1.2 | tRNA-Trp (NCBI) | compare |
| b3623 | rfaK | -1.1 | -2.4 | lipopolysaccharide core biosynthesis (NCBI) | compare |