Experiment set35IT070 for Pseudomonas putida KT2440

Compare to:

PUT8 MOI 0.1

200 most important genes:

  gene name fitness t score description  
PP_3627 -8.8 -6.1 conserved protein of unknown function compare
PP_0540 -8.0 -5.5 conserved inner membrane protein compare
PP_0789 -7.8 -5.4 N-acetyl-anhydromuramyl-L-alanine-amidase compare
PP_0405 -7.6 -5.3 conserved protein of unknown function compare
PP_1355 -7.4 -8.8 Muropeptide permease AmpG compare
PP_1774 -6.9 -3.2 conserved exported protein of unknown function compare
PP_5114 -6.9 -4.2 putative adenine methyltransferase compare
PP_2148 -6.7 -10.3 transcription-repair coupling factor compare
PP_2145 -6.7 -4.6 beta-N-acetylglucosaminidase compare
PP_0434 -6.6 -7.9 Anhydro-N-acetylmuramic acid kinase compare
PP_0406 -6.5 -4.5 Nucleotidyltransferase family protein compare
PP_1650 -6.1 -17.6 Sensor protein GacS compare
PP_1800 -6.1 -7.2 Oxidoreductase Rmd compare
PP_4938 -6.0 -10.0 putative Glycosyl transferase compare
PP_1803 -6.0 -11.4 UDP-sugar epimerase compare
PP_4099 -5.9 -17.4 two-componenent system BarA/UvrY - regulatory subunit compare
PP_1075 -5.9 -13.2 glycerol kinase compare
PP_1627 -5.7 -10.6 conserved protein of unknown function compare
PP_1776 -5.6 -9.4 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase compare
PP_5279 -5.6 -3.9 conserved protein of unknown function compare
PP_1764 -5.5 -3.8 Phosphoglycolate phosphatase 2 compare
PP_1801 -5.3 -11.3 Glycosyl transferase WbpY compare
PP_5217 -5.3 -12.9 Polyphosphate kinase compare
PP_1237 -5.3 -2.4 4-hydroxy-tetrahydrodipicolinate synthase compare
PP_1777 -5.0 -15.5 phosphomannomutase compare
PP_0435 -5.0 -4.9 Peptidase, M23/M37 family compare
PP_4874 -5.0 -2.8 50S ribosomal protein L9 compare
PP_4726 -5.0 -3.3 Chaperone protein DnaJ compare
PP_1789 -4.9 -5.8 Hydrolase, haloacid dehalogenase-like family compare
PP_4936 -4.9 -11.0 O-antigen polymerase compare
PP_1805 -4.8 -19.7 Polysaccharide biosynthesis protein compare
PP_1802 -4.7 -20.3 glycosyl transferase compare
PP_1780 -4.6 -20.3 putative mannosyltransferase compare
PP_1778 -4.6 -4.5 Lipopolysaccharide ABC export system, permease protein compare
PP_1779 -4.6 -4.4 Lipopolysaccharide ABC export system, ATP-binding protein compare
PP_1799 -4.6 -16.0 GDP-mannose 4,6-dehydratase compare
PP_1655 -4.4 -8.7 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
PP_1076 -4.3 -7.2 aquaglyceroporin compare
PP_0164 -4.2 -9.0 conserved protein of unknown function compare
PP_0066 -4.2 -6.5 Ribosomal RNA small subunit methyltransferase B compare
PP_4944 -4.1 -5.1 Carbamoyltransferase compare
PP_1036 -4.0 -11.5 membrane-bound lytic murein transglycosylase F compare
PP_1663 -4.0 -6.5 conserved exported protein of unknown function compare
PP_5145 -4.0 -19.7 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) compare
PP_1804 -4.0 -8.5 Glycosyl transferase WbpL compare
PP_5146 -3.8 -7.1 RNA pyrophosphohydrolase compare
PP_5283 -3.7 -5.9 periplasmic dipeptide transport protein compare
PP_4902 -3.6 -3.7 Oligoribonuclease compare
PP_2030 -3.4 -4.4 conserved protein of unknown function compare
PP_1898 -3.3 -2.2 MotA/TolQ/ExbB proton channel family protein compare
PP_1186 -3.3 -2.8 two component system DNA-binding transcriptional dual regulator compare
PP_1216 -3.2 -2.6 Holliday junction ATP-dependent DNA helicase RuvA compare
PP_2027 -3.1 -4.3 conserved exported protein of unknown function compare
PP_4720 -3.1 -1.8 putative RNA binding protein compare
PP_1654 -3.0 -2.1 cysteine synthase B compare
PP_2032 -2.9 -5.8 putative ATPase compare
PP_0719 -2.9 -1.9 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_1798 -2.9 -8.4 Outer membrane efflux protein compare
PP_4895 -2.6 -1.8 tRNA dimethylallyltransferase compare
PP_1918 -2.6 -8.4 septation protein compare
PP_1702 -2.6 -3.9 Recombination-associated protein RdgC compare
PP_0937 -2.6 -3.8 endoribonuclease G (RNAse G) compare
PP_5058 -2.6 -5.2 Carboxy-terminal-processing protease compare
PP_4171 -2.5 -10.2 conserved exported protein of unknown function compare
PP_0794 -2.4 -3.1 1-phosphofructokinase monomer compare
PP_1770 -2.4 -1.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
PP_1871 -2.3 -5.5 Protease HtpX compare
PP_2028 -2.3 -3.4 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat compare
PP_5706 -2.2 -2.7 Sec translocation complex - SecG subunit compare
PP_4805 -2.2 -8.9 membrane-bound lytic murein transglycosylase B compare
PP_5045 -2.2 -5.2 tRNA sulfurtransferase compare
PP_5054 -2.2 -2.7 glutaredoxin 3 compare
PP_1493 -2.1 -2.6 chemotaxis response regulator protein-glutamate methylesterase of group 3 operon compare
PP_t49 -2.0 -2.2 tRNA-Met compare
PP_4264 -2.0 -5.2 oxygen-independent coproporphyrinogen III dehydrogenase compare
PP_0962 -2.0 -1.9 toluene-tolerance protein compare
PP_4471 -1.9 -4.6 Magnesium transporter compare
PP_5095 -1.9 -1.0 pyrroline-5-carboxylate reductase compare
PP_1269 -1.9 -1.6 Universal stress protein family compare
PP_5008 -1.8 -2.0 Poly granule-associated protein compare
PP_0725 -1.8 -4.2 conserved hypothetical TPR repeat protein compare
PP_1626 -1.8 -5.1 DNA mismatch repair protein MutS compare
PP_1656 -1.8 -5.6 ATP:GTP 3'-pyrophosphotransferase compare
PP_1045 -1.8 -1.9 Type II secretion pathway protein XcpP compare
PP_4515 -1.8 -3.5 Transcriptional regulator, MarR family compare
PP_1807 -1.7 -5.8 2-dehydro-3-deoxyphosphooctonate aldolase compare
PP_4009 -1.7 -2.6 ATP-dependent Clp protease adapter protein ClpS compare
PP_1428 -1.7 -1.9 Sigma factor AlgU negative regulatory protein compare
PP_4971 -1.7 -7.6 putative Outer membrane-bound lytic murein transglycolase A compare
PP_4804 -1.6 -1.1 RlpA-like lipoprotein compare
PP_5329 -1.6 -3.4 putative phosphate ABC transporter, periplasmic phosphate-binding protein compare
PP_0787 -1.6 -3.0 quinolinate phosphoribosyltransferase (decarboxylating) monomer compare
PP_0872 -1.6 -3.7 Peptide chain release factor 3 compare
PP_4642 -1.6 -1.4 Cyclic diguanosine monophosphate-binding protein compare
PP_0958 -1.6 -4.4 phospholipid ABC transporter ATP-binding subunit compare
PP_4994 -1.6 -2.7 conserved protein of unknown function compare
PP_4008 -1.6 -4.6 ATP-dependent serine protease compare
PP_2029 -1.6 -1.5 von Willebrand factor type A domain protein compare
PP_2299 -1.6 -2.8 Trigger factor compare
PP_4798 -1.5 -5.7 putative Membrane-bound lytic murein transglycosylase compare
PP_3768 -1.5 -5.6 putative shikimate 5-dehydrogenase compare
PP_1733 -1.5 -1.8 membrane ATPase of the MinC-MinD-MinE system compare
PP_4217 -1.5 -10.3 outer membrane ferripyoverdine receptor FpvA, TonB-dependent compare
PP_1523 -1.5 -2.4 conserved protein of unknown function compare
PP_1790 -1.5 -1.8 putative Acylneuraminate cytidylyltransferase compare
PP_1629 -1.4 -3.9 Protein RecA compare
PP_3971 -1.4 -2.0 conserved protein of unknown function compare
PP_1204 -1.4 -3.5 putative Lipoprotein compare
PP_5284 -1.4 -3.3 UPF0758 protein PP_5284 compare
PP_0401 -1.4 -1.6 Ribosomal RNA small subunit methyltransferase A compare
PP_0941 -1.4 -3.4 putative ribosome associated protein compare
PP_1326 -1.4 -1.4 16S rRNA 2'-O-ribose C1402 methyltransferase compare
PP_0293 -1.4 -1.8 Imidazole glycerol phosphate synthase subunit HisF compare
PP_0961 -1.4 -5.1 toluene tolerance protein compare
PP_4517 -1.4 -2.3 conserved protein of unknown function compare
PP_0042 -1.4 -3.2 conserved exported protein of unknown function compare
PP_5227 -1.4 -5.0 diaminopimelate decarboxylase compare
PP_3769 -1.4 -3.5 conserved exported protein of unknown function compare
PP_4897 -1.3 -3.7 N-acetylmuramoyl-L-alanine amidase compare
PP_0839 -1.3 -2.1 tRNA Cm32/Um32 methyltransferase compare
PP_0218 -1.3 -5.1 Sensory box protein compare
PP_1797 -1.3 -5.0 HlyD family secretion protein compare
PP_5439 -1.3 -3.2 conserved protein of unknown function compare
PP_1096 -1.3 -1.4 putative electron transport complex protein compare
PP_4006 -1.3 -5.2 Putative arginyl-tRNA--protein transferase compare
PP_2098 -1.3 -5.3 D-alanyl-D-alanine carboxypeptidase compare
PP_0809 -1.3 -3.7 disulfide bond formation protein B compare
PP_5748 -1.3 -1.0 cytochrome c heme lyase subunit compare
PP_4499 -1.3 -2.8 putative maturation enzyme compare
PP_2863 -1.2 -2.6 conserved membrane protein of unknown function compare
PP_2903 -1.2 -1.5 peptidyl-prolyl cis-trans isomerase B (rotamase B) compare
PP_0691 -1.2 -1.5 Glutamate 5-kinase compare
PP_4813 -1.2 -5.5 PAP2 family protein/DedA family protein compare
PP_0346 -1.2 -4.6 putative Heptose kinase WapQ compare
PP_1198 -1.2 -2.3 transcriptional regulator, Cro/CI family (higA antitoxin like) compare
PP_0566 -1.2 -1.1 translation-related factor compare
PP_5241 -1.2 -1.6 DNA-binding response regulator, LuxR family compare
PP_0948 -1.1 -1.3 Phosphocarrier protein HPr compare
PP_2650 -1.1 -1.5 putative 4-hydroxybutyrate dehydrogenase compare
PP_0960 -1.1 -3.4 phospholipid ABC transporter binding protein compare
PP_4199 -1.1 -0.9 putative Lipoprotein compare
PP_0833 -1.1 -1.6 queuine tRNA-ribosyltransferase compare
PP_2880 -1.1 -2.2 Transcriptional regulator, TetR family compare
PP_1775 -1.1 -1.4 Metallo-beta-lactamase family protein compare
PP_1909 -1.1 -2.6 putative septum formation protein compare
PP_1041 -1.1 -1.1 twin arginine protein export complex subunit compare
PP_2530 -1.1 -1.1 conserved protein of unknown function compare
PP_5278 -1.1 -3.9 4-guanidinobutyraldehyde dehydrogenase compare
PP_2087 -1.1 -1.2 CmpX protein compare
PP_2163 -1.1 -3.1 VacJ lipoprotein compare
PP_1113 -1.0 -4.9 Pyridoxal-phosphate dependent enzyme family protein compare
PP_3504 -1.0 -3.1 conserved protein of unknown function compare
PP_4980 -1.0 -2.8 ATP-dependent RNA helicase compare
PP_3409 -1.0 -2.0 putative Cobalamin biosynthesis protein cobE compare
PP_2322 -1.0 -2.1 Major outer membrane lipoprotein compare
PP_5053 -1.0 -3.9 Protein-export protein SecB compare
PP_1748 -1.0 -3.6 conserved protein of unknown function compare
PP_2251 -1.0 -2.6 conserved membrane protein of unknown function compare
PP_4952 -1.0 -1.1 ATP-dependent RNA helicase, specific for 23S rRNA compare
PP_1513 -1.0 -1.8 Ribosomal RNA small subunit methyltransferase J compare
PP_4836 -1.0 -2.2 conserved exported protein of unknown function compare
PP_2765 -1.0 -1.2 putative Sulfonate monooxygenase MsuD compare
PP_5039 -1.0 -1.6 conserved protein of unknown function compare
PP_5101 -1.0 -3.6 coproporphyrinogen/heterocyclic compound oxidase (aerobic) compare
PP_0119 -1.0 -1.6 putative zinc uptake regulation protein ZUR compare
PP_1074 -1.0 -2.4 DNA-binding transcriptional repressor - GlpR-glycerol-3-phosphate compare
PP_3726 -1.0 -1.4 Enoyl-CoA hydratase/isomerase family protein compare
PP_2031 -1.0 -1.6 conserved protein of unknown function compare
PP_0598 -1.0 -5.3 paraquat-inducible protein A compare
PP_4682 -1.0 -4.0 conserved protein of unknown function containing tetratricopeptide repeat domain compare
PP_4495 -1.0 -5.9 aromatic amino acid transport protein compare
PP_3799 -0.9 -3.3 conserved exported protein of unknown function compare
PP_0319 -0.9 -1.7 conserved protein of unknown function compare
PP_3110 -0.9 -1.0 protein of unknown function compare
PP_3999 -0.9 -3.1 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_2005 -0.9 -3.5 conserved exported protein of unknown function compare
PP_0111 -0.9 -4.9 Electron transport protein SCO1/SenC compare
PP_0801 -0.9 -1.0 conserved exported protein of unknown function compare
PP_3861 -0.9 -2.5 Phage FluMu protein gp46 compare
PP_5113 -0.9 -2.6 predicted Zn-dependent peptidases compare
PP_3164 -0.9 -1.5 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase compare
PP_4470 -0.9 -1.5 putative transcriptional regulator (Arc domain-containing) compare
PP_0685 -0.9 -1.6 conserved protein of unknown function compare
PP_4570 -0.9 -4.9 conserved protein of unknown function compare
PP_2073 -0.9 -0.9 Acetyltransferase, GNAT family compare
PP_0928 -0.9 -4.8 K+-dependent Na+/Ca+ exchanger related-protein compare
PP_3876 -0.9 -1.8 conserved protein of unknown function compare
PP_1301 -0.9 -3.6 quality control serine endoprotease DegS compare
PP_0251 -0.9 -3.9 conserved membrane protein of unknown function compare
PP_3336 -0.9 -2.4 conserved protein of unknown function compare
PP_0856 -0.9 -0.6 conserved lipoprotein of unknown function compare
PP_1813 -0.9 -3.1 ComEA-related protein compare
PP_3064 -0.9 -1.4 Phage tail protein compare
PP_1309 -0.9 -2.9 conserved exported protein of unknown function compare
PP_1077 -0.9 -2.6 Cys-tRNAPro deacylase compare
PP_2622 -0.9 -2.0 conserved protein of unknown function compare
PP_5100 -0.9 -1.3 dITP/XTP pyrophosphatase compare
PP_0127 -0.9 -1.6 Thiol:disulfide interchange protein compare
PP_1026 -0.9 -1.9 Peptidase, M23/M37 family compare
PP_2142 -0.9 -1.7 Cell division inhibitor SulA compare


Specific Phenotypes

For 25 genes in this experiment

For phage PUT8 MOI 0.1 in Pseudomonas putida KT2440

For phage PUT8 MOI 0.1 across organisms