| | gene | name | fitness | t score | description | |
|---|
| b3961 | oxyR | -8.4 | -11.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2620 | smpB | -5.1 | -2.5 | SsrA-binding protein (NCBI) | compare |
| b3183 | obgE | -4.5 | -2.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2567 | rnc | -3.0 | -1.6 | ribonuclease III (NCBI) | compare |
| b2912 | ygfA | -3.0 | -6.1 | putative ligase (VIMSS) | compare |
| b0200 | gmhB | -3.0 | -2.8 | hypothetical protein (NCBI) | compare |
| b0222 | lpcA | -3.0 | -5.2 | phosphoheptose isomerase (NCBI) | compare |
| b0439 | lon | -2.8 | -8.6 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1192 | ldcA | -2.8 | -5.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b3341 | rpsG | -2.6 | -1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b3621 | rfaC | -2.6 | -9.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0049 | apaH | -2.6 | -5.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b0142 | folK | -2.5 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3162 | deaD | -2.4 | -8.2 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1860 | ruvB | -2.3 | -1.9 | Holliday junction DNA helicase B (NCBI) | compare |
| b3052 | rfaE | -2.1 | -6.1 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0738 | tolR | -2.1 | -4.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2330 | yfcB | -2.1 | -2.5 | putative adenine-specific methylase (VIMSS) | compare |
| b1187 | fadR | -2.1 | -4.1 | fatty acid metabolism regulator (NCBI) | compare |
| b3761 | trpT | -2.1 | -1.9 | tRNA-Trp (NCBI) | compare |
| b4375 | prfC | -2.1 | -7.5 | peptide chain release factor 3 (NCBI) | compare |
| b3619 | rfaD | -2.1 | -5.8 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0726 | sucA | -2.0 | -4.7 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3390 | aroK | -2.0 | -3.2 | shikimate kinase I (NCBI) | compare |
| b3261 | fis | -2.0 | -3.7 | DNA-binding protein Fis (NCBI) | compare |
| b1292 | sapC | -2.0 | -2.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2830 | nudH | -1.9 | -2.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0630 | lipB | -1.9 | -2.8 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1236 | galU | -1.9 | -5.9 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1863 | ruvC | -1.9 | -2.5 | Holliday junction resolvase (NCBI) | compare |
| b2297 | pta | -1.9 | -2.0 | phosphate acetyltransferase (NCBI) | compare |
| b0890 | ftsK | -1.9 | -8.0 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1575 | dicB | -1.8 | -2.1 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b2518 | ndk | -1.8 | -3.8 | nucleoside diphosphate kinase (NCBI) | compare |
| b1252 | tonB | -1.8 | -3.1 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0688 | pgm | -1.8 | -4.6 | phosphoglucomutase (NCBI) | compare |
| b1551 | b1551 | -1.8 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4042 | dgkA | -1.7 | -3.5 | diacylglycerol kinase (NCBI) | compare |
| b2168 | fruK | -1.7 | -1.8 | 1-phosphofructokinase (NCBI) | compare |
| b1712 | ihfA | -1.7 | -2.6 | integration host factor subunit alpha (NCBI) | compare |
| b1865 | nudB | -1.6 | -1.8 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1850 | eda | -1.6 | -1.8 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1058 | yceO | -1.6 | -0.5 | hypothetical protein (NCBI) | compare |
| b2820 | recB | -1.5 | -2.6 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3620 | rfaF | -1.5 | -5.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b4647 | mokA | -1.5 | -1.0 | no description | compare |
| b3631 | rfaG | -1.5 | -11.6 | glucosyltransferase I (NCBI) | compare |
| b1165 | ymgA | -1.5 | -0.9 | hypothetical protein (NCBI) | compare |
| b0990 | cspG | -1.5 | -1.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b0888 | trxB | -1.5 | -4.5 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3778 | rep | -1.5 | -8.0 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2937 | speB | -1.5 | -7.0 | agmatinase (NCBI) | compare |
| b3198 | kdsC | -1.5 | -3.1 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3630 | rfaP | -1.5 | -10.1 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b4163 | glyV | -1.4 | -1.5 | tRNA-Gly (NCBI) | compare |
| b3237 | argR | -1.4 | -4.4 | arginine repressor (NCBI) | compare |
| b2822 | recC | -1.4 | -5.8 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b3500 | gor | -1.4 | -2.1 | glutathione reductase (NCBI) | compare |
| b2894 | xerD | -1.4 | -1.2 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0232 | yafN | -1.4 | -0.6 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3414 | gntY | -1.4 | -5.2 | predicted gluconate transport associated protein (NCBI) | compare |
| b3741 | gidA | -1.4 | -6.3 | glucose-inhibited division protein A (NCBI) | compare |
| b0683 | fur | -1.4 | -1.2 | ferric uptake regulator (NCBI) | compare |
| b2576 | srmB | -1.3 | -3.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b0843 | ybjH | -1.3 | -3.0 | hypothetical protein (NCBI) | compare |
| b2479 | gcvR | -1.3 | -5.4 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0101 | yacG | -1.3 | -3.7 | zinc-binding protein (NCBI) | compare |
| b3229 | sspA | -1.3 | -3.6 | stringent starvation protein A (NCBI) | compare |
| b2498 | upp | -1.3 | -3.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3405 | ompR | -1.3 | -4.2 | osmolarity response regulator (NCBI) | compare |
| b4702 | mgtL | -1.3 | -2.1 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0739 | tolA | -1.3 | -3.6 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3842 | rfaH | -1.3 | -5.0 | transcriptional activator RfaH (NCBI) | compare |
| b2699 | recA | -1.3 | -1.8 | recombinase A (NCBI) | compare |
| b0605 | ahpC | -1.3 | -2.7 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1676 | pykF | -1.3 | -3.1 | pyruvate kinase (NCBI) | compare |
| b3493 | pitA | -1.3 | -7.1 | phosphate transporter, low-affinity (NCBI) | compare |
| b4414 | tff | -1.2 | -1.4 | unknown RNA (NCBI) | compare |
| b3002 | yqhA | -1.2 | -0.8 | hypothetical protein (NCBI) | compare |
| b1363 | trkG | -1.2 | -0.8 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b4571 | wbbL | -1.2 | -3.3 | no description | compare |
| b4146 | yjeK | -1.2 | -3.1 | predicted lysine aminomutase (NCBI) | compare |
| b1001 | yccE | -1.2 | -0.6 | hypothetical protein (NCBI) | compare |
| b1048 | mdoG | -1.2 | -4.9 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0178 | hlpA | -1.2 | -2.5 | periplasmic chaperone (NCBI) | compare |
| b3728 | pstS | -1.1 | -3.2 | phosphate transporter subunit (NCBI) | compare |
| b1499 | ydeO | -1.1 | -0.6 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1724 | ydiZ | -1.1 | -1.6 | hypothetical protein (NCBI) | compare |
| b3811 | xerC | -1.1 | -2.1 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2569 | lepA | -1.1 | -4.5 | GTP-binding protein LepA (NCBI) | compare |
| b1257 | yciE | -1.1 | -0.5 | hypothetical protein (NCBI) | compare |
| b3706 | trmE | -1.1 | -4.4 | tRNA modification GTPase (NCBI) | compare |
| b1600 | mdtJ | -1.1 | -2.3 | multidrug efflux system transporter (NCBI) | compare |
| b4535 | yniD | -1.1 | -1.3 | predicted protein (RefSeq) | compare |
| b3609 | secB | -1.1 | -3.3 | export protein SecB (NCBI) | compare |
| b4697 | yrdF | -1.1 | -2.9 | no description | compare |
| b4155 | yjeA | -1.1 | -0.7 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b3870 | glnA | -1.1 | -2.5 | glutamine synthetase (NCBI) | compare |
| b0099 | mutT | -1.1 | -2.8 | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP (NCBI) | compare |
| b3169 | nusA | -1.1 | -2.0 | transcription elongation factor NusA (NCBI) | compare |
| b4685 | yrbN | -1.1 | -1.9 | expressed protein (RefSeq) | compare |
| b0767 | ybhE | -1.1 | -3.3 | 6-phosphogluconolactonase (NCBI) | compare |
| b0737 | tolQ | -1.1 | -2.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1291 | sapD | -1.1 | -1.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4184 | yjfL | -1.1 | -4.3 | conserved inner membrane protein (NCBI) | compare |
| b1708 | nlpC | -1.1 | -2.2 | predicted lipoprotein (NCBI) | compare |
| b2808 | gcvA | -1.1 | -3.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2935 | tktA | -1.1 | -2.4 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0114 | aceE | -1.1 | -1.8 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b3600 | mtlD | -1.1 | -5.0 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b0658 | ybeX | -1.1 | -0.7 | predicteed ion transport (NCBI) | compare |
| b1635 | gst | -1.1 | -2.7 | glutathionine S-transferase (NCBI) | compare |
| b0741 | pal | -1.1 | -3.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2058 | wcaB | -1.0 | -1.0 | predicted acyl transferase (NCBI) | compare |
| b1963 | b1963 | -1.0 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1182 | hlyE | -1.0 | -0.6 | hemolysin E (VIMSS) | compare |
| b3164 | pnp | -1.0 | -2.4 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2456 | cchB | -1.0 | -3.8 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b0827 | moeA | -1.0 | -3.5 | molybdopterin biosynthesis protein (NCBI) | compare |
| b0438 | clpX | -1.0 | -5.2 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1025 | ycdT | -1.0 | -1.5 | predicted diguanylate cyclase (NCBI) | compare |
| b1290 | sapF | -1.0 | -1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0740 | tolB | -1.0 | -3.2 | translocation protein TolB precursor (NCBI) | compare |
| b0729 | sucD | -1.0 | -2.2 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3463 | ftsE | -1.0 | -1.4 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b4045 | yjbJ | -1.0 | -2.2 | predicted stress response protein (NCBI) | compare |
| b2528 | iscA | -1.0 | -1.0 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3781 | trxA | -1.0 | -2.6 | thioredoxin 1 (VIMSS) | compare |
| b2276 | nuoN | -1.0 | -3.8 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1084 | rne | -1.0 | -4.8 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b4441 | glmY | -0.9 | -1.3 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b3979 | thrT | -0.9 | -0.3 | tRNA-Thr (NCBI) | compare |
| b3871 | bipA | -0.9 | -6.3 | GTP-binding protein (NCBI) | compare |
| b0720 | gltA | -0.9 | -3.7 | citrate synthase (NCBI) | compare |
| b2318 | truA | -0.9 | -2.7 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1183 | umuD | -0.9 | -1.5 | DNA polymerase V, subunit D (NCBI) | compare |
| b2017 | yefM | -0.9 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1576 | ydfD | -0.9 | -0.4 | Qin prophage; predicted protein (NCBI) | compare |
| b4640 | yoeG | -0.9 | -3.3 | no description | compare |
| b1361 | ydaW | -0.9 | -0.4 | orf, hypothetical protein (VIMSS) | compare |
| b4172 | hfq | -0.9 | -0.7 | RNA-binding protein Hfq (NCBI) | compare |
| b0082 | mraW | -0.9 | -3.1 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3636 | rpmG | -0.9 | -1.2 | 50S ribosomal protein L33 (NCBI) | compare |
| b3204 | ptsN | -0.9 | -3.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b4407 | thiS | -0.9 | -1.5 | sulfur carrier protein ThiS (NCBI) | compare |
| b1855 | lpxM | -0.9 | -2.9 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3650 | spoT | -0.9 | -3.9 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b3290 | trkA | -0.9 | -2.1 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1138 | ymfE | -0.9 | -1.1 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b0145 | dksA | -0.9 | -2.3 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0471 | ybaB | -0.9 | -1.8 | hypothetical protein (NCBI) | compare |
| b2282 | nuoH | -0.9 | -2.2 | NADH dehydrogenase subunit H (NCBI) | compare |
| b1497 | b1497 | -0.9 | -0.7 | putative enzyme (VIMSS) | compare |
| b1664 | ydhQ | -0.9 | -2.8 | hypothetical protein (NCBI) | compare |
| b2277 | nuoM | -0.9 | -3.9 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1804 | rnd | -0.9 | -3.7 | ribonuclease D (NCBI) | compare |
| b3725 | pstB | -0.9 | -1.0 | phosphate transporter subunit (NCBI) | compare |
| b0437 | clpP | -0.9 | -3.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1936 | intG | -0.8 | -0.8 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b2564 | pdxJ | -0.8 | -2.4 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b1179 | ycgL | -0.8 | -1.9 | conserved protein (NCBI) | compare |
| b3916 | pfkA | -0.8 | -2.3 | 6-phosphofructokinase (NCBI) | compare |
| b2071 | yegJ | -0.8 | -1.5 | hypothetical protein (NCBI) | compare |
| b1423 | ydcJ | -0.8 | -2.3 | hypothetical protein (NCBI) | compare |
| b1536 | ydeI | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| b3035 | tolC | -0.8 | -4.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1730 | ydjO | -0.8 | -0.9 | predicted protein (RefSeq) | compare |
| b3613 | yibP | -0.8 | -3.0 | putative membrane protein (VIMSS) | compare |
| b1545 | pinQ | -0.8 | -0.1 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b2688 | gshA | -0.8 | -4.5 | glutamate--cysteine ligase (NCBI) | compare |
| b1908 | yecA | -0.8 | -2.4 | conserved metal-binding protein (NCBI) | compare |
| b2424 | cysU | -0.8 | -1.9 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b2113 | mrp | -0.8 | -2.9 | putative ATPase (VIMSS) | compare |
| b2698 | recX | -0.8 | -1.8 | RecA regulator RecX (NCBI) | compare |
| b0051 | ksgA | -0.8 | -3.3 | dimethyladenosine transferase (NCBI) | compare |
| b2288 | nuoA | -0.8 | -1.9 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0585 | fes | -0.8 | -3.9 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b2207 | napD | -0.8 | -1.8 | assembly protein for periplasmic nitrate reductase (NCBI) | compare |
| b1444 | ydcW | -0.8 | -2.7 | medium chain aldehyde dehydrogenase (NCBI) | compare |
| b4648 | ysaC | -0.8 | -1.6 | no description | compare |
| b1984 | asnW | -0.8 | -0.8 | tRNA-Asn (NCBI) | compare |
| b1258 | yciF | -0.8 | -1.0 | hypothetical protein (NCBI) | compare |
| b2198 | ccmD | -0.8 | -1.4 | cytochrome c biogenesis protein (NCBI) | compare |
| b1999 | yeeP | -0.8 | -2.6 | putative histone (VIMSS) | compare |
| b4012 | yjaB | -0.8 | -1.3 | predicted acetyltransferase (NCBI) | compare |
| b2150 | mglB | -0.8 | -2.7 | methyl-galactoside transporter subunit (NCBI) | compare |
| b4171 | miaA | -0.8 | -2.2 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3210 | arcB | -0.8 | -4.7 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b3623 | rfaK | -0.8 | -2.2 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b1709 | btuD | -0.8 | -0.8 | vitamin B12-transporter ATPase (NCBI) | compare |
| b4503 | yafF | -0.8 | -0.5 | no description | compare |
| b2286 | nuoC | -0.8 | -2.3 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0721 | sdhC | -0.8 | -1.9 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b2501 | ppk | -0.8 | -4.5 | polyphosphate kinase (NCBI) | compare |
| b1196 | ycgY | -0.8 | -2.4 | hypothetical protein (NCBI) | compare |
| b2281 | nuoI | -0.8 | -1.5 | NADH dehydrogenase subunit I (NCBI) | compare |
| b3726 | pstA | -0.7 | -3.0 | phosphate transporter subunit (NCBI) | compare |
| b0722 | sdhD | -0.7 | -2.4 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b2625 | yfjI | -0.7 | -1.5 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b3617 | kbl | -0.7 | -3.9 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |