| | gene | name | fitness | t score | description | |
|---|
| b1400 | paaY | +1.0 | 4.3 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b1550 | b1550 | +1.0 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b4545 | ypdJ | +0.9 | 2.7 | no description | compare |
| b1942 | fliJ | +0.8 | 1.9 | flagellar biosynthesis chaperone (NCBI) | compare |
| b1382 | ynbE | +0.7 | 1.7 | predicted lipoprotein (NCBI) | compare |
| b4418 | sraB | +0.7 | 2.0 | unknown RNA (NCBI) | compare |
| b1789 | yeaL | +0.6 | 2.9 | conserved inner membrane protein (NCBI) | compare |
| b1593 | b1593 | +0.6 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0998 | torD | +0.6 | 1.2 | chaperone protein TorD (NCBI) | compare |
| b2934 | cmtB | +0.6 | 0.8 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1609 | rstB | +0.6 | 2.4 | sensory histidine kinase in two-component regulatory system with RstA (NCBI) | compare |
| b0142 | folK | +0.6 | 0.7 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1370 | insH-5 | +0.6 | 2.0 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b0564 | appY | +0.6 | 0.8 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1434 | ydcN | +0.6 | 1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1591 | b1591 | +0.6 | 1.8 | putative oxidoreductase component (VIMSS) | compare |
| b0989 | cspH | +0.6 | 2.0 | stress protein, member of the CspA-family (NCBI) | compare |
| b1418 | cybB | +0.5 | 1.8 | cytochrome b(561) (VIMSS) | compare |
| b1949 | fliQ | +0.5 | 1.9 | flagellar biosynthesis protein Q (NCBI) | compare |
| b4181 | yjfI | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b1520 | b1520 | +0.5 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2096 | gatY | +0.5 | 2.8 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b0707 | ybgA | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b1642 | slyA | +0.5 | 1.7 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0210 | yafE | +0.5 | 2.6 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2450 | yffS | +0.5 | 1.8 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1070 | flgN | +0.5 | 1.0 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b2448 | yffQ | +0.5 | 1.8 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b0682 | ybfN | +0.5 | 1.9 | predicted lipoprotein (NCBI) | compare |
| b1560 | ydfU | +0.5 | 1.7 | Qin prophage; predicted protein (RefSeq) | compare |
| b0843 | ybjH | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b1358 | ydaT | +0.5 | 1.0 | Rac prophage; predicted protein (NCBI) | compare |
| b4041 | plsB | +0.5 | 1.5 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b4011 | yjaA | +0.5 | 1.6 | hypothetical protein (NCBI) | compare |
| b2659 | b2659 | +0.5 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2410 | yfeH | +0.5 | 2.4 | predicted inner membrane protein (NCBI) | compare |
| b1348 | lar | +0.5 | 1.6 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b4642 | yoeD | +0.5 | 1.4 | no description | compare |
| b2783 | chpR | +0.5 | 1.9 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b1523 | yneG | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b4552 | yrhC | +0.4 | 0.7 | no description | compare |
| b4578 | insP | +0.4 | 1.6 | no description | compare |
| b1953 | b1953 | +0.4 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4529 | ydbJ | +0.4 | 0.7 | hypothetical protein (NCBI) | compare |
| b4551 | yheV | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b1540 | ydfH | +0.4 | 1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1429 | tehA | +0.4 | 0.4 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1765 | ydjA | +0.4 | 0.6 | predicted oxidoreductase (NCBI) | compare |
| b3545 | proK | +0.4 | 1.6 | tRNA-Pro (NCBI) | compare |
| b1819 | manZ | +0.4 | 1.9 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b1476 | fdnI | +0.4 | 0.7 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1219 | ychN | +0.4 | 2.5 | hypothetical protein (NCBI) | compare |
| b4582 | yoeA | +0.4 | 2.4 | no description | compare |
| b0934 | ycbM | +0.4 | 1.7 | putative transport system permease protein (VIMSS) | compare |
| b2195 | ccmG | +0.4 | 1.6 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b0870 | ltaE | +0.4 | 2.9 | L-allo-threonine aldolase, PLP-dependent (NCBI) | compare |
| b2083 | yegZ | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1640 | ydhH | +0.4 | 2.2 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b1595 | ynfL | +0.4 | 1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1119 | nagK | +0.4 | 1.7 | N-acetyl-D-glucosamine kinase (NCBI) | compare |
| b4698 | mgrR | +0.4 | 2.0 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b2642 | yfjW | +0.4 | 0.6 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0001 | thrL | +0.4 | 0.9 | thr operon leader peptide (NCBI) | compare |
| b4568 | ytjA | +0.4 | 1.3 | predicted protein (RefSeq) | compare |
| b0706 | ybfD | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b1778 | yeaA | +0.4 | 1.6 | methionine sulfoxide reductase B (NCBI) | compare |
| b1853 | yebK | +0.4 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2171 | yeiP | +0.4 | 1.7 | putative elongation factor (VIMSS) | compare |
| b0822 | ybiV | +0.4 | 2.2 | predicted hydrolase (NCBI) | compare |
| b3074 | ygjH | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b0929 | ompF | +0.4 | 2.2 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b1108 | ycfP | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0487 | cueR | +0.4 | 2.0 | DNA-binding transcriptional activator of copper-responsive regulon genes (NCBI) | compare |
| b4406 | yaeP | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b3354 | yheU | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b4566 | yjhX | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1672 | ydhW | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b1758 | b1758 | +0.4 | 0.7 | putative cytochrome oxidase (VIMSS) | compare |
| b1753 | ynjA | +0.4 | 0.9 | hypothetical protein (NCBI) | compare |
| b0852 | rimK | +0.4 | 2.6 | ribosomal protein S6 modification protein (NCBI) | compare |
| b3484 | yhhI | +0.4 | 1.4 | predicted transposase (NCBI) | compare |
| b3059 | ygiH | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1025 | ycdT | +0.4 | 0.9 | predicted diguanylate cyclase (NCBI) | compare |
| b2939 | yqgB | +0.4 | 1.0 | predicted protein (RefSeq) | compare |
| b1448 | yncA | +0.4 | 1.4 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4646 | yrdE | +0.4 | 2.1 | no description | compare |
| b1829 | htpX | +0.4 | 2.2 | heat shock protein HtpX (NCBI) | compare |
| b2038 | rfbC | +0.4 | 2.5 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b1617 | uidA | +0.3 | 1.9 | beta-D-glucuronidase (NCBI) | compare |
| b1333 | uspE | +0.3 | 1.3 | stress-induced protein (NCBI) | compare |
| b1253 | yciA | +0.3 | 1.1 | predicted hydrolase (NCBI) | compare |
| b1153 | ymfQ | +0.3 | 1.5 | e14 prophage; conserved protein (NCBI) | compare |
| b4704 | arrS | +0.3 | 0.1 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b1742 | b1742 | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2504 | yfgG | +0.3 | 0.7 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b0263 | afuB | +0.3 | 1.5 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b1892 | flhD | +0.3 | 1.8 | DNA-binding transcriptional dual regulator with FlhC (RefSeq) | compare |
| b1134 | ymfB | +0.3 | 0.9 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b4477 | dgoA | +0.3 | 1.8 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (NCBI) | compare |
| b4416 | rybA | +0.3 | 0.8 | unknown RNA (NCBI) | compare |
| b0579 | ybdF | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b4522 | yciX_1 | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b1948 | fliP | +0.3 | 1.9 | flagellar biosynthesis protein P (NCBI) | compare |
| b1519 | tam | +0.3 | 1.5 | trans-aconitate 2-methyltransferase (NCBI) | compare |
| b0122 | yacC | +0.3 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1332 | ynaJ | +0.3 | 0.3 | predicted inner membrane protein (NCBI) | compare |
| b4128 | yjdK | +0.3 | 0.5 | hypothetical protein (NCBI) | compare |
| b3483 | yhhH | +0.3 | 0.1 | orf, hypothetical protein (VIMSS) | compare |
| b1618 | uidR | +0.3 | 0.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1226 | narJ | +0.3 | 2.1 | molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 (NCBI) | compare |
| b1105 | ycfM | +0.3 | 1.2 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0897 | ycaC | +0.3 | 1.8 | predicted hydrolase (NCBI) | compare |
| b1818 | manY | +0.3 | 0.9 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b3280 | yrdB | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b1922 | fliA | +0.3 | 1.9 | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | compare |
| b1960 | vsr | +0.3 | 2.0 | DNA mismatch endonuclease of very short patch repair (NCBI) | compare |
| b1282 | yciH | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1141 | ymfG | +0.3 | 1.4 | e14 prophage; predicted excisionase (NCBI) | compare |
| b4519 | icdC | +0.3 | 2.0 | no description | compare |
| b0164 | yaeI | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0381 | ddlA | +0.3 | 2.1 | D-alanylalanine synthetase (NCBI) | compare |
| b4438 | cyaR | +0.3 | 1.3 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b1698 | ydiR | +0.3 | 1.2 | predicted electron transfer flavoprotein, FAD-binding (NCBI) | compare |
| b3644 | yicC | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b1822 | rrmA | +0.3 | 1.0 | 23S rRNA m1G745 methyltransferase (NCBI) | compare |
| b0655 | gltI | +0.3 | 1.4 | glutamate and aspartate transporter subunit (NCBI) | compare |
| b4453 | ldrD | +0.3 | 1.0 | toxic polypeptide, small (NCBI) | compare |
| b1189 | dadA | +0.3 | 2.0 | D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) | compare |
| b2309 | hisJ | +0.3 | 1.2 | histidine/lysine/arginine/ornithine transporter subunit (NCBI) | compare |
| b0249 | ykfF | +0.3 | 1.2 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b1843 | yobB | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b3029 | ygiN | +0.3 | 1.1 | quinol monooxygenase (NCBI) | compare |
| b1035 | ycdY | +0.3 | 2.4 | hypothetical protein (NCBI) | compare |
| b1296 | ycjJ | +0.3 | 1.4 | putative amino acid/amine transport protein (VIMSS) | compare |
| b4215 | ytfI | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b0909 | ycaL | +0.3 | 1.6 | putative heat shock protein (VIMSS) | compare |
| b4345 | mcrC | +0.3 | 0.5 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b1558 | cspF | +0.3 | 0.9 | Qin prophage; cold shock protein (NCBI) | compare |
| b2317 | dedA | +0.3 | 1.5 | conserved inner membrane protein (NCBI) | compare |
| b1572 | ydfB | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b0515 | ylbA | +0.3 | 2.6 | hypothetical protein (NCBI) | compare |
| b2706 | gutM | +0.3 | 1.5 | DNA-binding transcriptional activator of glucitol operon (NCBI) | compare |
| b4603 | rseX | +0.3 | 0.4 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1343 | dbpA | +0.3 | 1.8 | ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) | compare |
| b4363 | yjjB | +0.3 | 1.9 | conserved inner membrane protein (RefSeq) | compare |
| b2603 | yfiR | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b1419 | ydcA | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b2809 | b2809 | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0790 | ybhP | +0.3 | 1.5 | predicted DNase (NCBI) | compare |
| b1462 | b1462 | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1127 | pepT | +0.3 | 2.0 | peptidase T (NCBI) | compare |
| b2002 | yeeS | +0.3 | 2.1 | CP4-44 prophage; predicted DNA repair protein (NCBI) | compare |
| b1299 | puuR | +0.3 | 1.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2143 | cdd | +0.3 | 1.2 | cytidine deaminase (NCBI) | compare |
| b2334 | yfcQ | +0.3 | 2.0 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3382 | yhfY | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1682 | sufC | +0.3 | 1.6 | cysteine desulfurase ATPase component (NCBI) | compare |
| b1320 | ycjW | +0.3 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2992 | hybE | +0.3 | 2.0 | hydrogenase 2-specific chaperone (NCBI) | compare |
| b0454 | ybaZ | +0.3 | 1.8 | predicted methyltransferase (NCBI) | compare |
| b3378 | yhfU | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2959 | yggL | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4631 | ykgQ | +0.3 | 0.9 | no description | compare |
| b2378 | ddg | +0.3 | 1.3 | putative heat shock protein (VIMSS) | compare |
| b0267 | yagA | +0.3 | 2.2 | CP4-6 prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3909 | kdgT | +0.3 | 1.8 | 2-keto-3-deoxy-D-gluconate transport system (VIMSS) | compare |
| b3646 | yicG | +0.3 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3098 | yqjD | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b1760 | ynjH | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b1743 | spy | +0.3 | 1.2 | envelope stress induced periplasmic protein (NCBI) | compare |
| b4360 | yjjA | +0.3 | 1.8 | putative glycoprotein/receptor (VIMSS) | compare |
| b0189 | yaeO | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4030 | yjbA | +0.3 | 1.5 | phosphate-starvation-inducible protein PsiE (NCBI) | compare |
| b3208 | mtgA | +0.3 | 1.9 | monofunctional biosynthetic peptidoglycan transglycosylase (NCBI) | compare |
| b1412 | azoR | +0.3 | 1.4 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b1321 | ycjX | +0.3 | 1.6 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b3658 | selC | +0.3 | 0.9 | tRNA-Sec (NCBI) | compare |
| b0872 | hcr | +0.3 | 1.0 | HCP oxidoreductase, NADH-dependent (NCBI) | compare |
| b2717 | hycI | +0.3 | 2.2 | protease involved in processing C-terminal end of HycE (NCBI) | compare |
| b4565 | sgcB | +0.3 | 1.8 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b1148 | ymfM | +0.3 | 1.0 | e14 prophage; predicted protein (NCBI) | compare |
| b2050 | wcaI | +0.3 | 1.2 | predicted glycosyl transferase (NCBI) | compare |
| b3002 | yqhA | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b0987 | ymcD | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1958 | yedI | +0.3 | 1.5 | conserved inner membrane protein (NCBI) | compare |
| b2922 | yggE | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b1450 | b1450 | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1263 | trpD | +0.3 | 1.3 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b0775 | bioB | +0.3 | 1.4 | biotin synthase (NCBI) | compare |
| b1752 | ydjZ | +0.3 | 1.3 | conserved inner membrane protein (NCBI) | compare |
| b1833 | yebS | +0.3 | 1.5 | conserved inner membrane protein (NCBI) | compare |
| b1328 | ycjZ | +0.3 | 1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4456 | ryiA | +0.3 | 1.8 | regulatory sRNA (NCBI) | compare |
| b0995 | torR | +0.3 | 1.3 | DNA-binding response regulator in two-component regulatory system with TorS (NCBI) | compare |
| b4057 | yjbR | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1686 | ydiI | +0.3 | 0.5 | hypothetical protein (NCBI) | compare |
| b1057 | yceJ | +0.3 | 1.8 | predicted cytochrome b561 (NCBI) | compare |
| b4559 | yjdO | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b1349 | recT | +0.3 | 1.8 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b0809 | glnQ | +0.3 | 1.2 | glutamine ABC transporter ATP-binding protein (NCBI) | compare |