Experiment set32S572 for Pseudomonas simiae WCS417

Fraxetin 3 mM; liquid stress

Group: liquid stress
Media: + Fraxetin (3 mM)
Culturing: fluoroDangl_ML3b
By: Max Stassen on 29-Mar-24

Specific Phenotypes

For 18 genes in this experiment

For liquid stress Fraxetin in Pseudomonas simiae WCS417

For liquid stress Fraxetin across organisms

SEED Subsystems

Subsystem	#Specific
Transport of Iron	4
Iron acquisition in Vibrio	3
Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria	2
Queuosine-Archaeosine Biosynthesis	2
Campylobacter Iron Metabolism	1
Copper homeostasis	1
Serine-glyoxylate cycle	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Folate biosynthesis
• Sulfur metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
assimilatory sulfate reduction III	3	3	1
assimilatory sulfate reduction I	4	4	1
threo-tetrahydrobiopterin biosynthesis	4	2	1
preQ0 biosynthesis	4	2	1
erythro-tetrahydrobiopterin biosynthesis I	4	2	1
drosopterin and aurodrosopterin biosynthesis	7	5	1
superpathway of sulfate assimilation and cysteine biosynthesis	9	9	1
superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae)	10	7	1
superpathway of L-methionine biosynthesis (by sulfhydrylation)	12	12	1