Experiment set32S562 for Pseudomonas simiae WCS417

200 most important genes:

gene	name	fitness	t score	description
PS417_23915		-3.8	-4.2	pantoate--beta-alanine ligase
PS417_27795		-3.3	-1.2	orotate phosphoribosyltransferase
PS417_06680		-2.7	-6.4	nuclease PIN
PS417_27865		-2.6	-2.8	LysR family transcriptional regulator
PS417_04380		-2.5	-1.6	ABC transporter permease
PS417_28050		-2.2	-1.9	hypothetical protein
PS417_26730		-2.2	-1.2	pyrroline-5-carboxylate reductase
PS417_08685		-2.2	-2.5	flagellar hook-length control protein FliK
PS417_00345		-2.1	-2.7	copper-binding protein
PS417_22565		-2.1	-0.8	formyltetrahydrofolate deformylase
PS417_06375		-2.1	-0.8	deoxycytidine triphosphate deaminase
PS417_05815		-2.0	-4.3	recombinase RecA
PS417_03465		-1.8	-2.2	type III secretion protein
PS417_22445		-1.8	-3.4	ATP-dependent DNA helicase RuvB
PS417_19350		-1.8	-5.3	GTP cyclohydrolase
PS417_27870		-1.7	-2.8	ATP-dependent DNA helicase RecG
PS417_09590		-1.7	-5.3	membrane protein
PS417_23810		-1.5	-7.9	acetolactate synthase 3 catalytic subunit
PS417_27195		-1.5	-1.5	N-acetylglutamate synthase
PS417_22570		-1.5	-1.1	H-NS histone
PS417_09600		-1.5	-4.1	glycosyl transferase family 1
PS417_02555		-1.4	-8.4	exoribonuclease R
PS417_13205		-1.4	-2.0	isochorismate-pyruvate lyase
PS417_22450		-1.4	-1.4	ATP-dependent DNA helicase RuvA
PS417_23385		-1.4	-6.4	cytochrome o ubiquinol oxidase subunit I
PS417_02485		-1.4	-2.4	tRNA delta(2)-isopentenylpyrophosphate transferase
PS417_21480		-1.4	-1.6	23S rRNA pseudouridylate synthase
PS417_23805		-1.4	-4.0	acetolactate synthase 3 regulatory subunit
PS417_16555		-1.3	-1.8	cupin
PS417_26990		-1.3	-1.0	RNA pyrophosphohydrolase
PS417_03560		-1.3	-1.3	GTP-binding protein
PS417_15095		-1.3	-3.5	hypothetical protein
PS417_28070		-1.3	-4.8	phosphate ABC transporter ATP-binding protein
PS417_10645		-1.3	-3.6	magnesium ABC transporter ATPase
PS417_09210		-1.3	-1.7	TetR family transcriptional regulator
PS417_03260		-1.3	-1.3	5S ribosomal RNA
PS417_00650		-1.2	-1.1	LysR family transcriptional regulator
PS417_01620		-1.2	-2.1	preprotein translocase subunit SecB
PS417_09595		-1.2	-6.0	membrane protein
PS417_18360		-1.2	-2.4	hypothetical protein
PS417_01560		-1.2	-2.6	imidazoleglycerol-phosphate dehydratase
PS417_09585		-1.1	-6.2	acetyltransferase
PS417_28080		-1.1	-7.6	phosphate ABC transporter permease
PS417_23380		-1.1	-1.6	cytochrome o ubiquinol oxidase subunit III
PS417_19835		-1.1	-2.1	flagellar biosynthesis protein FliS
PS417_23390		-1.1	-4.8	ubiquinol oxidase subunit II
PS417_23370		-1.1	-3.0	protoheme IX farnesyltransferase
PS417_00510		-1.1	-1.5	membrane protein
PS417_11705		-1.1	-4.5	cyclic peptide transporter
PS417_17215		-1.1	-1.8	peptidylprolyl isomerase
PS417_26775		-1.0	-3.6	thiazole synthase
PS417_18420		-1.0	-2.2	deoxyribonuclease
PS417_27425		-1.0	-4.7	exopolyphosphatase
PS417_09615		-1.0	-3.2	glycosyl transferase family 1
PS417_08170		-1.0	-5.7	capsular biosynthesis protein
PS417_01915		-1.0	-0.5	ATP-dependent protease ATP-binding subunit HslU
PS417_24605		-1.0	-2.8	thiamine-phosphate pyrophosphorylase
PS417_24600		-1.0	-4.7	hydrogenase
PS417_08410		-1.0	-2.4	hypothetical protein
PS417_02255		-1.0	-1.6	lipopolysaccharide kinase
PS417_22620		-1.0	-3.7	pyruvate kinase
PS417_25390		-1.0	-2.7	MFS transporter
PS417_02880		-0.9	-1.3	copper chaperone
PS417_22810		-0.9	-1.8	DNA base-flipping protein YbaZ
PS417_04365		-0.9	-0.7	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
PS417_16490		-0.9	-0.8	cell division protein FtsK
PS417_00175		-0.9	-1.2	CigR
PS417_19730		-0.9	-3.0	flagellar biosynthesis protein FliR
PS417_24500		-0.9	-1.8	DEAD/DEAH box helicase
PS417_13010		-0.9	-2.0	alpha/beta hydrolase
PS417_19850		-0.9	-4.2	branched-chain alpha-keto acid dehydrogenase subunit E2
PS417_08990		-0.9	-2.1	ABC transporter substrate-binding protein
PS417_06685		-0.9	-0.8	beta-ketoadipyl CoA thiolase
PS417_03455		-0.8	-1.2	type III secretion protein
PS417_18105		-0.8	-1.6	iron-dicitrate transporter substrate-binding subunit
PS417_15090		-0.8	-2.3	hypothetical protein
PS417_07305		-0.8	-2.2	3-beta hydroxysteroid dehydrogenase
PS417_09625		-0.8	-2.1	sugar ABC transporter substrate-binding protein
PS417_08540		-0.8	-1.7	RNA helicase
PS417_04385		-0.8	-1.5	organic solvent ABC transporter substrate-binding protein
PS417_16255		-0.8	-1.2	RNA polymerase sigma factor
PS417_20775		-0.8	-2.9	coproporphyrinogen III oxidase
PS417_20985		-0.8	-0.5	porin
PS417_16510		-0.8	-1.6	Clp protease ClpX
PS417_03145		-0.8	-2.4	acetyl-CoA acetyltransferase
PS417_22895		-0.8	-4.1	tyrosine recombinase XerD
PS417_19955		-0.8	-0.7	hypothetical protein
PS417_10060		-0.8	-1.6	hypothetical protein
PS417_03100		-0.8	-0.9	pilus assembly protein
PS417_06400		-0.8	-2.2	succinylglutamate desuccinylase
PS417_01855		-0.7	-1.0	phosphoribosyl-AMP cyclohydrolase
PS417_15285		-0.7	-0.9	type VI secretion protein
PS417_09245		-0.7	-1.3	recombinase RdgC
PS417_03785		-0.7	-1.4	pilus assembly protein PilV
PS417_06150		-0.7	-2.0	SAM-dependent methlyltransferase
PS417_00370		-0.7	-0.8	hypothetical protein
PS417_21070		-0.7	-1.5	aconitate hydratase
PS417_06040		-0.7	-1.9	hypothetical protein
PS417_04440		-0.7	-1.5	hypoxanthine-guanine phosphoribosyltransferase
PS417_17630		-0.7	-2.4	RNA polymerase sigma factor
PS417_03300		-0.7	-1.7	alanine acetyltransferase
PS417_05575		-0.7	-3.8	Glycerol kinase (EC 2.7.1.30) (from data)
PS417_28075		-0.7	-2.2	phosphate ABC transporter permease
PS417_07470		-0.7	-1.1	hypothetical protein
PS417_23900		-0.7	-3.4	poly(A) polymerase
PS417_07940		-0.7	-2.3	hypothetical protein
PS417_08130		-0.7	-1.3	aspartate aminotransferase
PS417_19415		-0.7	-2.4	allantoinase
PS417_25730		-0.7	-2.5	phosphoglycolate phosphatase
PS417_22705		-0.7	-2.1	glycerol-3-phosphate ABC transporter substrate-binding protein
PS417_25765		-0.7	-1.1	transcriptional regulator
PS417_23375		-0.7	-1.1	cytochrome C oxidase
PS417_15705		-0.7	-1.8	nitrate reductase
PS417_18355		-0.7	-4.5	DNA-binding protein
PS417_23910		-0.7	-2.4	3-methyl-2-oxobutanoate hydroxymethyltransferase
PS417_04390		-0.7	-1.7	toluene tolerance protein
PS417_16885		-0.7	-1.8	hypothetical protein
PS417_00375		-0.7	-1.9	membrane protein
PS417_20705		-0.6	-2.1	cbb3-type cytochrome c oxidase subunit II
PS417_18470		-0.6	-1.5	hypothetical protein
PS417_27915		-0.6	-3.4	type VI secretion system protein ImpM
PS417_01945		-0.6	-2.2	nuclease
PS417_03045		-0.6	-1.3	hypothetical protein
PS417_00915		-0.6	-2.3	aminotransferase
PS417_15540		-0.6	-1.2	NUDIX hydrolase
PS417_16715		-0.6	-1.3	DoxX family protein
PS417_04270		-0.6	-3.8	ribonuclease G
PS417_10710		-0.6	-1.4	GNAT family acetyltransferase
PS417_02705		-0.6	-1.8	urease accessory protein UreF
PS417_22520		-0.6	-0.8	histidine kinase
PS417_06895		-0.6	-1.8	DNA-binding protein
PS417_00045		-0.6	-1.1	glycerol acyltransferase
PS417_26685		-0.6	-1.5	hypothetical protein
PS417_27605		-0.6	-3.7	hypothetical protein
PS417_27715		-0.6	-1.9	Fe-S oxidoreductase
PS417_00085		-0.6	-1.6	16S rRNA methyltransferase
PS417_00945		-0.6	-1.6	sulfate ABC transporter ATP-binding protein
PS417_05160		-0.6	-0.8	DNA polymerase III subunit chi
PS417_20720		-0.6	-2.1	cbb3-type cytochrome c oxidase subunit I
PS417_20030		-0.6	-1.7	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
PS417_05200		-0.6	-2.2	DNA recombination protein RecO
PS417_26535		-0.6	-2.1	cytochrome B561
PS417_21400		-0.6	-2.8	TetR family transcriptional regulator
PS417_06735		-0.6	-1.0	3-oxoadipate enol-lactonase
PS417_02975		-0.6	-2.1	3-dehydroquinate dehydratase
PS417_09865		-0.6	-0.8	hypothetical protein
PS417_14260		-0.6	-1.8	phosphate ABC transporter permease
PS417_07640		-0.6	-2.2	glyceraldehyde-3-phosphate dehydrogenase
PS417_19860		-0.6	-4.5	flagellar hook protein FlgL
PS417_06835		-0.6	-1.2	phospholipase
PS417_26420		-0.6	-1.0	hypothetical protein
PS417_02720		-0.6	-0.7	TetR family transcriptional regulator
PS417_14835		-0.6	-1.2	amidase
PS417_06205		-0.5	-3.2	methionine aminopeptidase
PS417_06730		-0.5	-1.0	3-carboxy-cis,cis-muconate cycloisomerase
PS417_10095		-0.5	-1.2	hypothetical protein
PS417_11615		-0.5	-1.1	urea ABC transporter ATP-binding protein
PS417_11430		-0.5	-2.6	EamA
PS417_04915		-0.5	-0.9	glutamine ABC transporter ATP-binding protein
PS417_02510		-0.5	-1.8	ATP phosphoribosyltransferase regulatory subunit
PS417_10330		-0.5	-1.9	histidine kinase
PS417_15110		-0.5	-3.1	protein BatD
PS417_23080		-0.5	-1.4	sugar ABC transporter ATPase
PS417_19675		-0.5	-1.9	chemotaxis protein CheY
PS417_02430		-0.5	-2.4	histidine kinase
PS417_11715		-0.5	-2.1	chromophore maturation protein PvdO
PS417_14655		-0.5	-0.8	lysine transporter LysE
PS417_18425		-0.5	-0.9	sporulation protein
PS417_10455		-0.5	-2.1	membrane protein
PS417_01580		-0.5	-0.7	imidazole glycerol phosphate synthase
PS417_01685		-0.5	-2.0	membrane protein
PS417_19790		-0.5	-2.3	ATP synthase
PS417_04435		-0.5	-3.3	uracil phosphoribosyltransferase
PS417_13730		-0.5	-1.6	hypothetical protein
PS417_28140		-0.5	-1.2	asparaginase
PS417_06200		-0.5	-2.3	protein-PII uridylyltransferase
PS417_13885		-0.5	-1.6	chemotaxis protein CheY
PS417_19800		-0.5	-1.6	flagellar motor switch protein FliG
PS417_00655		-0.5	-3.0	DSBA oxidoreductase
PS417_16720		-0.5	-0.7	membrane protein
PS417_15325		-0.5	-0.8	type VI secretion protein
PS417_13085		-0.5	-1.9	FMN-dependent NADH-azoreductase
PS417_28230		-0.5	-1.6	transcriptional regulator
PS417_18440		-0.5	-2.4	hypothetical protein
PS417_19270		-0.5	-1.4	hypothetical protein
PS417_27245		-0.5	-1.1	aminotransferase DegT
PS417_21255		-0.5	-1.0	hypothetical protein
PS417_09305		-0.5	-1.5	hypothetical protein
PS417_23615		-0.5	-1.3	sulfate transporter
PS417_26550		-0.5	-2.4	ABC transporter
PS417_14125		-0.5	-2.1	molybdenum ABC transporter ATP-binding protein
PS417_11390		-0.5	-1.6	LysR family transcriptional regulator
PS417_12935		-0.5	-1.3	RNA polymerase sigma factor
PS417_21625		-0.5	-0.6	DNA-binding protein
PS417_16320		-0.5	-1.5	protein tyrosine phosphatase
PS417_17925		-0.5	-1.3	acyl-CoA dehydrogenase
PS417_15120		-0.5	-2.5	chromosome segregation protein SMC
PS417_11070		-0.5	-1.5	rhizopine-binding protein
PS417_01995		-0.5	-1.6	hypothetical protein
PS417_15975		-0.5	-1.0	glutamate carboxypeptidase

Specific Phenotypes

None in this experiment

For Pseudomonas simiae WCS417 in solid stress experiments

For solid stress Scopoletin across organisms