Experiment set32S531 for Pseudomonas simiae WCS417

200 most important genes:

gene	name	fitness	t score	description
PS417_23915		-3.3	-4.4	pantoate--beta-alanine ligase
PS417_28050		-3.0	-2.7	hypothetical protein
PS417_06680		-2.7	-5.7	nuclease PIN
PS417_19350		-2.6	-5.2	GTP cyclohydrolase
PS417_09590		-2.6	-6.5	membrane protein
PS417_08090		-2.5	-1.2	3-oxoacyl-ACP reductase
PS417_27195		-2.5	-1.4	N-acetylglutamate synthase
PS417_22450		-2.4	-1.9	ATP-dependent DNA helicase RuvA
PS417_27870		-2.4	-3.2	ATP-dependent DNA helicase RecG
PS417_09595		-2.3	-5.0	membrane protein
PS417_23380		-2.2	-3.6	cytochrome o ubiquinol oxidase subunit III
PS417_03260		-2.2	-1.5	5S ribosomal RNA
PS417_26730		-2.2	-1.1	pyrroline-5-carboxylate reductase
PS417_06375		-2.0	-0.7	deoxycytidine triphosphate deaminase
PS417_22570		-2.0	-1.2	H-NS histone
PS417_08155		-2.0	-1.7	integration host factor subunit beta
PS417_23810		-1.9	-9.4	acetolactate synthase 3 catalytic subunit
PS417_16560		-1.9	-2.8	GNAT family acetyltransferase
PS417_16555		-1.9	-1.5	cupin
PS417_09585		-1.8	-9.0	acetyltransferase
PS417_02555		-1.8	-10.9	exoribonuclease R
PS417_09600		-1.8	-4.8	glycosyl transferase family 1
PS417_01605		-1.7	-1.6	phosphoglycerate mutase
PS417_05595		-1.7	-7.8	ornithine carbamoyltransferase
PS417_21425		-1.7	-2.6	4-amino-4-deoxychorismate lyase
PS417_10645		-1.6	-4.1	magnesium ABC transporter ATPase
PS417_23805		-1.5	-4.7	acetolactate synthase 3 regulatory subunit
PS417_19955		-1.5	-1.9	hypothetical protein
PS417_14515		-1.5	-2.0	acetylglucosaminylphosphatidylinositol deacetylase
PS417_24600		-1.5	-5.9	hydrogenase
PS417_02975		-1.5	-5.0	3-dehydroquinate dehydratase
PS417_04380		-1.5	-1.0	ABC transporter permease
PS417_22445		-1.5	-3.1	ATP-dependent DNA helicase RuvB
PS417_02880		-1.5	-1.7	copper chaperone
PS417_27425		-1.5	-5.5	exopolyphosphatase
PS417_26775		-1.4	-9.0	thiazole synthase
PS417_27795		-1.4	-0.7	orotate phosphoribosyltransferase
PS417_27865		-1.4	-2.6	LysR family transcriptional regulator
PS417_04365		-1.4	-0.7	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
PS417_21480		-1.4	-1.6	23S rRNA pseudouridylate synthase
PS417_08410		-1.4	-1.8	hypothetical protein
PS417_27245		-1.3	-2.3	aminotransferase DegT
PS417_02485		-1.3	-2.6	tRNA delta(2)-isopentenylpyrophosphate transferase
PS417_23385		-1.3	-6.0	cytochrome o ubiquinol oxidase subunit I
PS417_06145		-1.2	-1.3	hypothetical protein
PS417_09235		-1.2	-1.1	molecular chaperone
PS417_23375		-1.2	-1.8	cytochrome C oxidase
PS417_25270		-1.2	-3.0	NrdR family transcriptional regulator
PS417_26850		-1.1	-1.0	twin-arginine translocation pathway signal protein
PS417_04375		-1.1	-1.1	ABC transporter ATP-binding protein
PS417_08170		-1.1	-6.2	capsular biosynthesis protein
PS417_09615		-1.1	-2.9	glycosyl transferase family 1
PS417_16510		-1.1	-4.0	Clp protease ClpX
PS417_24605		-1.1	-2.5	thiamine-phosphate pyrophosphorylase
PS417_24935		-1.1	-1.1	hypothetical protein
PS417_25390		-1.1	-2.5	MFS transporter
PS417_21105		-1.1	-7.0	aminodeoxychorismate synthase
PS417_01575		-1.1	-4.5	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data)
PS417_03830		-1.1	-6.5	protein disaggregation chaperone
PS417_04500		-1.1	-1.5	hypothetical protein
PS417_27640		-1.1	-1.2	TetR family transcriptional regulator
PS417_04585		-1.1	-1.4	hypothetical protein
PS417_26420		-1.0	-1.8	hypothetical protein
PS417_11705		-1.0	-6.5	cyclic peptide transporter
PS417_19755		-1.0	-1.9	flagellar motor switch protein FliM
PS417_19065		-1.0	-1.0	monooxygenase
PS417_05695		-1.0	-3.8	transcriptional regulator
PS417_09625		-1.0	-1.8	sugar ABC transporter substrate-binding protein
PS417_23910		-1.0	-3.8	3-methyl-2-oxobutanoate hydroxymethyltransferase
PS417_01560		-1.0	-1.6	imidazoleglycerol-phosphate dehydratase
PS417_02510		-1.0	-3.8	ATP phosphoribosyltransferase regulatory subunit
PS417_23475		-0.9	-1.3	hypothetical protein
PS417_20705		-0.9	-2.8	cbb3-type cytochrome c oxidase subunit II
PS417_24675		-0.9	-1.9	lipoyl synthase
PS417_28070		-0.9	-4.2	phosphate ABC transporter ATP-binding protein
PS417_03560		-0.9	-1.1	GTP-binding protein
PS417_01920		-0.9	-0.9	ATP-dependent protease subunit HslV
PS417_28515		-0.9	-1.8	16S rRNA methyltransferase
PS417_02255		-0.9	-1.4	lipopolysaccharide kinase
PS417_08245		-0.9	-0.9	CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase
PS417_23900		-0.9	-4.1	poly(A) polymerase
PS417_02560		-0.9	-1.2	23S rRNA methyltransferase
PS417_06685		-0.9	-0.8	beta-ketoadipyl CoA thiolase
PS417_07540		-0.9	-3.1	multifunctional fatty acid oxidation complex subunit alpha
PS417_23095		-0.8	-1.0	exodeoxyribonuclease
PS417_09620		-0.8	-4.8	lipopolysaccharide biosynthesis protein
PS417_23390		-0.8	-4.9	ubiquinol oxidase subunit II
PS417_13510		-0.8	-0.9	polyketide cyclase
PS417_01195		-0.8	-2.3	RNA-binding protein S4
PS417_17840		-0.8	-1.8	betaine-aldehyde dehydrogenase
PS417_21630		-0.8	-1.1	magnesium transporter
PS417_20715		-0.8	-1.3	cytochrome Cbb3
PS417_24500		-0.8	-1.7	DEAD/DEAH box helicase
PS417_25720		-0.8	-4.4	anthranilate synthase component II
PS417_02870		-0.8	-5.3	TonB-dependent receptor
PS417_04650		-0.8	-0.4	D-alanine--D-alanine ligase
PS417_13255		-0.8	-1.9	ABC transporter
PS417_22535		-0.8	-4.4	ornithine acetyltransferase
PS417_01270		-0.8	-1.6	iron ABC transporter substrate-binding protein
PS417_02865		-0.8	-3.3	peptidase
PS417_01580		-0.8	-1.0	imidazole glycerol phosphate synthase
PS417_12310		-0.8	-3.3	methionine synthase
PS417_18710		-0.8	-3.7	hypothetical protein
PS417_06530		-0.8	-0.9	membrane protein
PS417_20985		-0.8	-0.5	porin
PS417_00995		-0.8	-1.6	alpha/beta hydrolase
PS417_15660		-0.8	-2.6	hemerythrin
PS417_10920		-0.8	-2.2	LysR family transcriptional regulator
PS417_26695		-0.8	-0.9	uracil phosphoribosyltransferase
PS417_13205		-0.8	-1.3	isochorismate-pyruvate lyase
PS417_22895		-0.8	-4.4	tyrosine recombinase XerD
PS417_06895		-0.8	-2.1	DNA-binding protein
PS417_07695		-0.8	-2.9	NADPH-dependent 7-cyano-7-deazaguanine reductase
PS417_16520		-0.8	-1.4	cold-shock protein
PS417_23950		-0.8	-1.1	polynucleotide phosphorylase/polyadenylase
PS417_02475		-0.7	-1.4	N-acetylmuramoyl-L-alanine amidase
PS417_23370		-0.7	-2.4	protoheme IX farnesyltransferase
PS417_19790		-0.7	-2.6	ATP synthase
PS417_08540		-0.7	-1.5	RNA helicase
PS417_23625		-0.7	-1.8	LysR family transcriptional regulator
PS417_04410		-0.7	-1.3	hypothetical protein
PS417_07305		-0.7	-2.0	3-beta hydroxysteroid dehydrogenase
PS417_19160		-0.7	-2.2	hypothetical protein
PS417_11455		-0.7	-2.0	hypothetical protein
PS417_08250		-0.7	-1.2	competence protein ComEA
PS417_26990		-0.7	-0.5	RNA pyrophosphohydrolase
PS417_08580		-0.7	-2.2	histidine kinase
PS417_19835		-0.7	-1.0	flagellar biosynthesis protein FliS
PS417_05100		-0.7	-1.4	RNA polymerase sigma factor
PS417_09730		-0.7	-1.9	adenylylsulfate kinase
PS417_28510		-0.7	-2.5	chromosome partitioning protein
PS417_22530		-0.7	-3.1	hypothetical protein
PS417_18355		-0.7	-3.7	DNA-binding protein
PS417_22690		-0.7	-2.1	phosphogluconate dehydratase
PS417_04420		-0.7	-3.6	histidinol dehydrogenase
PS417_19600		-0.7	-0.9	exonuclease
PS417_01620		-0.7	-1.5	preprotein translocase subunit SecB
PS417_27405		-0.7	-2.8	hypothetical protein
PS417_10265		-0.7	-1.7	peptidase
PS417_03630		-0.7	-2.0	hypothetical protein
PS417_01565		-0.6	-2.9	imidazole glycerol phosphate synthase
PS417_08740		-0.6	-1.1	ribose-phosphate pyrophosphokinase
PS417_10145		-0.6	-1.9	hypothetical protein
PS417_18160		-0.6	-1.8	YeeE/YedE
PS417_02210		-0.6	-2.2	diguanylate cyclase
PS417_27705		-0.6	-1.1	amino acid dehydrogenase
PS417_18310		-0.6	-0.5	hypothetical protein
PS417_11300		-0.6	-2.4	general secretion pathway protein GspE
PS417_01710		-0.6	-3.0	histidine utilization repressor
PS417_07615		-0.6	-2.8	TetR family transcriptional regulator
PS417_24030		-0.6	-1.8	MFS transporter
PS417_06850		-0.6	-1.2	methanol dehydrogenase
PS417_03785		-0.6	-1.4	pilus assembly protein PilV
PS417_12280		-0.6	-0.6	MerR family transcriptional regulator
PS417_16490		-0.6	-0.7	cell division protein FtsK
PS417_19805		-0.6	-1.9	flagellar M-ring protein FliF
PS417_10060		-0.6	-1.1	hypothetical protein
PS417_07710		-0.6	-1.6	membrane protein
PS417_05325		-0.6	-1.5	fimbrial protein
PS417_15095		-0.6	-1.5	hypothetical protein
PS417_13260		-0.6	-3.3	pyochelin synthetase
PS417_16360		-0.6	-2.5	histidine kinase
PS417_27605		-0.6	-3.6	hypothetical protein
PS417_19730		-0.6	-2.5	flagellar biosynthesis protein FliR
PS417_09160		-0.6	-1.9	GNAT family acetyltransferase
PS417_19850		-0.6	-4.0	branched-chain alpha-keto acid dehydrogenase subunit E2
PS417_07640		-0.6	-1.7	glyceraldehyde-3-phosphate dehydrogenase
PS417_01115		-0.6	-0.7	serine acetyltransferase
PS417_04390		-0.6	-1.2	toluene tolerance protein
PS417_06675		-0.6	-1.3	ATP-dependent helicase
PS417_17560		-0.6	-1.4	Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data)
PS417_20170		-0.6	-1.6	hypothetical protein
PS417_15325		-0.6	-0.9	type VI secretion protein
PS417_06205		-0.6	-3.7	methionine aminopeptidase
PS417_10840		-0.6	-1.1	amidase
PS417_25985		-0.6	-1.2	dethiobiotin synthetase
PS417_16775		-0.6	-1.6	branched-chain amino acid ABC transporter ATP-binding protein
PS417_11825		-0.6	-1.6	transcriptional regulator
PS417_06730		-0.6	-0.9	3-carboxy-cis,cis-muconate cycloisomerase
PS417_14940		-0.6	-1.1	LysR family transcriptional regulator
PS417_15495		-0.6	-3.2	FAD-dependent oxidoreductase
PS417_00825		-0.5	-0.8	recombinase RecF
PS417_22375		-0.5	-0.6	cold-shock protein
PS417_01340		-0.5	-2.7	agmatine deiminase
PS417_13425		-0.5	-1.0	cupin
PS417_02745		-0.5	-1.3	FMN-dependent NADH-azoreductase
PS417_08685		-0.5	-0.8	flagellar hook-length control protein FliK
PS417_07190		-0.5	-1.6	MFS transporter
PS417_27135		-0.5	-0.4	glutamine synthetase
PS417_00485		-0.5	-1.0	ABC transporter permease
PS417_28230		-0.5	-1.5	transcriptional regulator
PS417_27295		-0.5	-2.1	hypothetical protein
PS417_17780		-0.5	-0.7	Ais protein
PS417_28080		-0.5	-3.7	phosphate ABC transporter permease
PS417_22300		-0.5	-0.8	LTXXQ domain protein
PS417_18800		-0.5	-1.8	hypothetical protein
PS417_26370		-0.5	-1.3	RNA helicase
PS417_15990		-0.5	-1.5	GntR family transcriptional regulator
PS417_27340		-0.5	-1.5	NADPH:quinone oxidoreductase
PS417_15780		-0.5	-1.3	membrane protein

Specific Phenotypes

For 1 genes in this experiment

For solid stress 80% Methanol in Pseudomonas simiae WCS417

For solid stress 80% Methanol across organisms