| | gene | name | fitness | t score | description | |
|---|
| b2557 | purL | -4.9 | -13.3 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b0523 | purE | -4.9 | -5.2 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b3443 | yrhA | -4.8 | -3.7 | orf, hypothetical protein (VIMSS) | compare |
| b2312 | purF | -4.8 | -7.9 | amidophosphoribosyltransferase (NCBI) | compare |
| b3052 | rfaE | -4.8 | -7.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1865 | nudB | -4.5 | -2.4 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0053 | surA | -4.4 | -3.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b4005 | purD | -4.1 | -9.7 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b4006 | purH | -4.0 | -12.7 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b3621 | rfaC | -3.6 | -9.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2476 | purC | -3.6 | -3.1 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b2499 | purM | -3.6 | -7.2 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b3390 | aroK | -3.5 | -3.8 | shikimate kinase I (NCBI) | compare |
| b0522 | purK | -3.3 | -10.7 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b3620 | rfaF | -3.1 | -8.1 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3500 | gor | -3.1 | -3.4 | glutathione reductase (NCBI) | compare |
| b3619 | rfaD | -2.9 | -6.8 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0564 | appY | -2.8 | -1.1 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3261 | fis | -2.5 | -3.0 | DNA-binding protein Fis (NCBI) | compare |
| b0222 | lpcA | -2.4 | -3.7 | phosphoheptose isomerase (NCBI) | compare |
| b0630 | lipB | -2.4 | -1.6 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4651 | yibW | -2.3 | -1.6 | no description | compare |
| b0688 | pgm | -2.2 | -4.1 | phosphoglucomutase (NCBI) | compare |
| b2699 | recA | -2.1 | -1.5 | recombinase A (NCBI) | compare |
| b3183 | obgE | -2.0 | -1.8 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1863 | ruvC | -1.9 | -2.2 | Holliday junction resolvase (NCBI) | compare |
| b4375 | prfC | -1.8 | -5.9 | peptide chain release factor 3 (NCBI) | compare |
| b2620 | smpB | -1.8 | -1.5 | SsrA-binding protein (NCBI) | compare |
| b3916 | pfkA | -1.8 | -3.4 | 6-phosphofructokinase (NCBI) | compare |
| b1346 | ydaQ | -1.8 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0990 | cspG | -1.8 | -1.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b0200 | gmhB | -1.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b1292 | sapC | -1.7 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0401 | brnQ | -1.7 | -7.0 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |
| b2894 | xerD | -1.6 | -1.1 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2830 | nudH | -1.6 | -1.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1686 | ydiI | -1.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b2313 | cvpA | -1.6 | -2.7 | membrane protein required for colicin V production (NCBI) | compare |
| b1860 | ruvB | -1.5 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b3405 | ompR | -1.5 | -3.8 | osmolarity response regulator (NCBI) | compare |
| b0741 | pal | -1.5 | -3.9 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0740 | tolB | -1.4 | -3.7 | translocation protein TolB precursor (NCBI) | compare |
| b3863 | polA | -1.4 | -1.3 | DNA polymerase I (NCBI) | compare |
| b2567 | rnc | -1.4 | -0.9 | ribonuclease III (NCBI) | compare |
| b0386 | proC | -1.4 | -3.9 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4509 | ylcG | -1.3 | -3.4 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1942 | fliJ | -1.3 | -1.1 | flagellar biosynthesis chaperone (NCBI) | compare |
| b4505 | insX | -1.3 | -1.9 | predicted IS protein (RefSeq) | compare |
| b2569 | lepA | -1.3 | -3.2 | GTP-binding protein LepA (NCBI) | compare |
| b4179 | vacB | -1.3 | -5.4 | putative enzyme (VIMSS) | compare |
| b1936 | intG | -1.3 | -1.1 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3082 | ygjM | -1.2 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1192 | ldcA | -1.2 | -2.4 | L,D-carboxypeptidase A (NCBI) | compare |
| b1286 | rnb | -1.2 | -1.7 | exoribonuclease II (NCBI) | compare |
| b3630 | rfaP | -1.2 | -7.2 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2501 | ppk | -1.2 | -5.7 | polyphosphate kinase (NCBI) | compare |
| b0737 | tolQ | -1.2 | -2.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3706 | trmE | -1.2 | -3.6 | tRNA modification GTPase (NCBI) | compare |
| b1382 | ynbE | -1.2 | -1.4 | predicted lipoprotein (NCBI) | compare |
| b4171 | miaA | -1.2 | -2.6 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2318 | truA | -1.2 | -2.3 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0142 | folK | -1.1 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1025 | ycdT | -1.1 | -2.3 | predicted diguanylate cyclase (NCBI) | compare |
| b3613 | yibP | -1.1 | -3.1 | putative membrane protein (VIMSS) | compare |
| b0588 | fepC | -1.1 | -4.7 | iron-enterobactin transporter subunit (NCBI) | compare |
| b2330 | yfcB | -1.1 | -1.3 | putative adenine-specific methylase (VIMSS) | compare |
| b0590 | fepD | -1.1 | -4.7 | iron-enterobactin transporter subunit (NCBI) | compare |
| b1777 | b1777 | -1.1 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4592 | yccB | -1.1 | -1.8 | hypothetical protein (RefSeq) | compare |
| b3199 | yrbK | -1.1 | -1.9 | hypothetical protein (NCBI) | compare |
| b1446 | ydcY | -1.1 | -1.7 | hypothetical protein (NCBI) | compare |
| b3811 | xerC | -1.1 | -1.0 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3002 | yqhA | -1.1 | -1.3 | hypothetical protein (NCBI) | compare |
| b2363 | yfdT | -1.1 | -2.1 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0767 | ybhE | -1.1 | -3.3 | 6-phosphogluconolactonase (NCBI) | compare |
| b4647 | mokA | -1.1 | -0.8 | no description | compare |
| b2506 | yfgI | -1.1 | -2.4 | hypothetical protein (NCBI) | compare |
| b4345 | mcrC | -1.1 | -0.7 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b3026 | qseC | -1.0 | -2.8 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2652 | ileY | -1.0 | -0.7 | tRNA-Ile (NCBI) | compare |
| b0303 | ykgI | -1.0 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b3778 | rep | -1.0 | -4.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1252 | tonB | -1.0 | -2.6 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2017 | yefM | -1.0 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1129 | phoQ | -1.0 | -1.9 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0439 | lon | -1.0 | -3.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0585 | fes | -1.0 | -4.6 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b1848 | yebG | -1.0 | -1.3 | conserved protein regulated by LexA (NCBI) | compare |
| b0560 | nohB | -1.0 | -2.7 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b1261 | trpB | -1.0 | -2.2 | tryptophan synthase subunit beta (NCBI) | compare |
| b0738 | tolR | -1.0 | -2.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0949 | uup | -1.0 | -3.7 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4538 | yoeF | -1.0 | -1.0 | hypothetical protein (RefSeq) | compare |
| b1159 | mcrA | -1.0 | -0.7 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b2188 | yejM | -0.9 | -5.0 | predicted hydrolase, inner membrane (NCBI) | compare |
| b2479 | gcvR | -0.9 | -2.8 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b3387 | dam | -0.9 | -5.6 | DNA adenine methylase (NCBI) | compare |
| b4679 | yohP | -0.9 | -2.7 | expressed protein (RefSeq) | compare |
| b3741 | gidA | -0.9 | -3.5 | glucose-inhibited division protein A (NCBI) | compare |
| b3842 | rfaH | -0.9 | -3.2 | transcriptional activator RfaH (NCBI) | compare |
| b4685 | yrbN | -0.9 | -2.2 | expressed protein (RefSeq) | compare |
| b4146 | yjeK | -0.9 | -2.3 | predicted lysine aminomutase (NCBI) | compare |
| b3005 | exbD | -0.9 | -3.4 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1179 | ycgL | -0.9 | -2.4 | conserved protein (NCBI) | compare |
| b0726 | sucA | -0.8 | -2.1 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b4042 | dgkA | -0.8 | -1.1 | diacylglycerol kinase (NCBI) | compare |
| b3027 | ygiZ | -0.8 | -0.5 | conserved inner membrane protein (NCBI) | compare |
| b3839 | tatC | -0.8 | -3.1 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0890 | ftsK | -0.8 | -2.8 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b4676 | yoaK | -0.8 | -0.4 | expressed protein (RefSeq) | compare |
| b2642 | yfjW | -0.8 | -0.8 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4535 | yniD | -0.8 | -1.0 | predicted protein (RefSeq) | compare |
| b1253 | yciA | -0.8 | -2.0 | predicted hydrolase (NCBI) | compare |
| b1918 | yecS | -0.8 | -2.0 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4203 | rplI | -0.8 | -2.7 | 50S ribosomal protein L9 (NCBI) | compare |
| b0589 | fepG | -0.8 | -4.0 | iron-enterobactin transporter subunit (NCBI) | compare |
| b1823 | cspC | -0.8 | -1.3 | stress protein, member of the CspA-family (NCBI) | compare |
| b1084 | rne | -0.8 | -1.9 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b3973 | birA | -0.8 | -2.4 | biotin--protein ligase (NCBI) | compare |
| b1765 | ydjA | -0.8 | -0.6 | predicted oxidoreductase (NCBI) | compare |
| b0178 | hlpA | -0.8 | -2.9 | periplasmic chaperone (NCBI) | compare |
| b0584 | fepA | -0.8 | -4.8 | iron-enterobactin outer membrane transporter (NCBI) | compare |
| b3624 | rfaZ | -0.8 | -1.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0623 | cspE | -0.7 | -1.0 | cold shock protein E (NCBI) | compare |
| b2325 | yfcL | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| b0617 | citD | -0.7 | -0.8 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b2369 | evgA | -0.7 | -2.8 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b1677 | lpp | -0.7 | -1.2 | murein lipoprotein (NCBI) | compare |
| b0018 | mokC | -0.7 | -1.0 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b2913 | serA | -0.7 | -3.5 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b0857 | potI | -0.7 | -2.2 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4045 | yjbJ | -0.7 | -1.5 | predicted stress response protein (NCBI) | compare |
| b1707 | ydiV | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b1236 | galU | -0.7 | -2.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1850 | eda | -0.7 | -0.9 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b4407 | thiS | -0.7 | -1.5 | sulfur carrier protein ThiS (NCBI) | compare |
| b1802 | yeaW | -0.7 | -2.4 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b0866 | ybjQ | -0.7 | -0.8 | hypothetical protein (NCBI) | compare |
| b1782 | mipA | -0.7 | -2.4 | scaffolding protein for murein synthesizing machinery (NCBI) | compare |
| b1553 | ydfP | -0.7 | -1.5 | Qin prophage; conserved protein (NCBI) | compare |
| b4699 | fnrS | -0.7 | -0.5 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1620 | malI | -0.7 | -0.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1533 | ydeD | -0.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2498 | upp | -0.7 | -1.0 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1175 | minD | -0.7 | -2.1 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3006 | exbB | -0.7 | -3.7 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2518 | ndk | -0.7 | -1.1 | nucleoside diphosphate kinase (NCBI) | compare |
| b3021 | ygiT | -0.6 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4388 | serB | -0.6 | -2.8 | 3-phosphoserine phosphatase (NCBI) | compare |
| b1519 | tam | -0.6 | -1.8 | trans-aconitate 2-methyltransferase (NCBI) | compare |
| b4701 | sokX | -0.6 | -0.7 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1639 | ydhA | -0.6 | -3.2 | orf, hypothetical protein (VIMSS) | compare |
| b3250 | mreC | -0.6 | -0.9 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b4513 | kdpF | -0.6 | -1.7 | potassium ion accessory transporter subunit (NCBI) | compare |
| b0683 | fur | -0.6 | -0.6 | ferric uptake regulator (NCBI) | compare |
| b1693 | aroD | -0.6 | -1.7 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b0908 | aroA | -0.6 | -3.0 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b4551 | yheV | -0.6 | -1.2 | hypothetical protein (NCBI) | compare |
| b3609 | secB | -0.6 | -1.9 | export protein SecB (NCBI) | compare |
| b1993 | cobU | -0.6 | -2.7 | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (NCBI) | compare |
| b2010 | dacD | -0.6 | -3.0 | penicillin binding protein 6b (VIMSS) | compare |
| b3742 | mioC | -0.6 | -2.8 | flavodoxin (NCBI) | compare |
| b3181 | greA | -0.6 | -1.9 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0994 | torT | -0.6 | -1.8 | periplasmic sensory protein associated with the TorRS two-component regulatory system (NCBI) | compare |
| b2820 | recB | -0.6 | -0.4 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0280 | yagN | -0.6 | -2.5 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b0535 | fimZ | -0.6 | -1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1753 | ynjA | -0.6 | -1.2 | hypothetical protein (NCBI) | compare |
| b4655 | ythA | -0.6 | -0.6 | expressed protein (RefSeq) | compare |
| b2576 | srmB | -0.6 | -1.2 | ATP-dependent RNA helicase (NCBI) | compare |
| b2340 | sixA | -0.6 | -2.3 | phosphohistidine phosphatase (NCBI) | compare |
| b1357 | ydaS | -0.6 | -1.1 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1185 | dsbB | -0.6 | -1.3 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b1685 | ydiH | -0.6 | -0.8 | predicted protein (RefSeq) | compare |
| b0714 | nei | -0.6 | -2.1 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b2809 | b2809 | -0.6 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3836 | b3836 | -0.6 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3290 | trkA | -0.6 | -1.1 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1712 | ihfA | -0.6 | -0.8 | integration host factor subunit alpha (NCBI) | compare |
| b0912 | ihfB | -0.6 | -1.8 | integration host factor subunit beta (NCBI) | compare |
| b3631 | rfaG | -0.6 | -4.5 | glucosyltransferase I (NCBI) | compare |
| b0592 | fepB | -0.6 | -3.1 | iron-enterobactin transporter subunit (NCBI) | compare |
| b2512 | yfgL | -0.6 | -2.0 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b2189 | proL | -0.6 | -0.9 | tRNA-Pro (NCBI) | compare |
| b2350 | yfdG | -0.6 | -2.9 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b1536 | ydeI | -0.6 | -0.7 | hypothetical protein (NCBI) | compare |
| b4481 | rffT | -0.6 | -2.3 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1478 | adhP | -0.6 | -1.9 | alcohol dehydrogenase (VIMSS) | compare |
| b1218 | chaC | -0.6 | -1.9 | regulatory protein for cation transport (RefSeq) | compare |
| b0216 | aspV | -0.6 | -2.3 | tRNA-Asp (NCBI) | compare |
| b3281 | aroE | -0.6 | -4.0 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3238 | yhcN | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1968 | yedV | -0.5 | -1.5 | predicted sensory kinase in two-component regulatory system with YedW (NCBI) | compare |
| b3356 | yhfA | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b0471 | ybaB | -0.5 | -1.4 | hypothetical protein (NCBI) | compare |
| b3794 | rffM | -0.5 | -3.0 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3257 | yhdT | -0.5 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b3180 | yhbY | -0.5 | -2.4 | predicted RNA-binding protein (NCBI) | compare |
| b1323 | tyrR | -0.5 | -2.3 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b0853 | ybjN | -0.5 | -2.4 | predicted oxidoreductase (NCBI) | compare |