| | gene | name | fitness | t score | description | |
|---|
| b2499 | purM | -7.2 | -7.0 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b2476 | purC | -6.2 | -4.5 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b4006 | purH | -5.9 | -17.6 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b4005 | purD | -5.9 | -13.1 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b0523 | purE | -5.5 | -4.8 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b0907 | serC | -5.2 | -9.4 | phosphoserine aminotransferase (NCBI) | compare |
| b2557 | purL | -5.0 | -13.7 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b4388 | serB | -4.9 | -9.8 | 3-phosphoserine phosphatase (NCBI) | compare |
| b2913 | serA | -4.6 | -12.4 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b2312 | purF | -4.4 | -8.6 | amidophosphoribosyltransferase (NCBI) | compare |
| b1281 | pyrF | -3.8 | -5.6 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b3642 | pyrE | -3.6 | -7.2 | orotate phosphoribosyltransferase (NCBI) | compare |
| b0945 | pyrD | -3.6 | -13.9 | dihydroorotate dehydrogenase (NCBI) | compare |
| b1062 | pyrC | -3.5 | -11.9 | dihydroorotase (NCBI) | compare |
| b4245 | pyrB | -3.3 | -11.9 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b0522 | purK | -3.1 | -9.9 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b0033 | carB | -3.0 | -14.6 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b2168 | fruK | -2.9 | -1.5 | 1-phosphofructokinase (NCBI) | compare |
| b3620 | rfaF | -2.9 | -8.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0032 | carA | -2.8 | -11.2 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b1861 | ruvA | -2.7 | -1.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2784 | relA | -2.7 | -13.2 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0889 | lrp | -2.7 | -3.2 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b2318 | truA | -2.7 | -4.9 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2329 | aroC | -2.6 | -6.9 | chorismate synthase (NCBI) | compare |
| b0049 | apaH | -2.6 | -3.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b1865 | nudB | -2.5 | -2.7 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0437 | clpP | -2.5 | -6.6 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b4699 | fnrS | -2.4 | -1.6 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b4647 | mokA | -2.3 | -1.6 | no description | compare |
| b0908 | aroA | -2.2 | -9.1 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3619 | rfaD | -2.2 | -4.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3631 | rfaG | -2.2 | -15.3 | glucosyltransferase I (NCBI) | compare |
| b2501 | ppk | -2.2 | -11.6 | polyphosphate kinase (NCBI) | compare |
| b0588 | fepC | -2.2 | -8.7 | iron-enterobactin transporter subunit (NCBI) | compare |
| b3621 | rfaC | -2.2 | -7.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3500 | gor | -2.1 | -2.5 | glutathione reductase (NCBI) | compare |
| b0145 | dksA | -2.1 | -4.9 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0014 | dnaK | -2.1 | -3.3 | molecular chaperone DnaK (NCBI) | compare |
| b3026 | qseC | -2.1 | -5.1 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0738 | tolR | -2.1 | -2.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0004 | thrC | -2.1 | -8.8 | threonine synthase (NCBI) | compare |
| b0585 | fes | -2.0 | -7.7 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b0002 | thrA | -2.0 | -13.9 | bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) | compare |
| b2498 | upp | -2.0 | -4.2 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0589 | fepG | -2.0 | -9.0 | iron-enterobactin transporter subunit (NCBI) | compare |
| b0590 | fepD | -2.0 | -10.4 | iron-enterobactin transporter subunit (NCBI) | compare |
| b0003 | thrB | -2.0 | -10.1 | homoserine kinase (NCBI) | compare |
| b0592 | fepB | -1.9 | -10.2 | iron-enterobactin transporter subunit (NCBI) | compare |
| b3389 | aroB | -1.9 | -8.9 | 3-dehydroquinate synthase (NCBI) | compare |
| b0438 | clpX | -1.9 | -6.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3169 | nusA | -1.8 | -3.2 | transcription elongation factor NusA (NCBI) | compare |
| b0740 | tolB | -1.8 | -4.7 | translocation protein TolB precursor (NCBI) | compare |
| b3387 | dam | -1.8 | -11.6 | DNA adenine methylase (NCBI) | compare |
| b2699 | recA | -1.7 | -1.6 | recombinase A (NCBI) | compare |
| b0630 | lipB | -1.7 | -1.2 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0726 | sucA | -1.7 | -4.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1642 | slyA | -1.7 | -2.3 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b3281 | aroE | -1.6 | -12.2 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3792 | wzxE | -1.6 | -7.7 | O-antigen translocase (NCBI) | compare |
| b1860 | ruvB | -1.6 | -1.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b4481 | rffT | -1.6 | -7.7 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1261 | trpB | -1.6 | -3.7 | tryptophan synthase subunit beta (NCBI) | compare |
| b4246 | pyrL | -1.6 | -1.8 | pyrBI operon leader peptide (NCBI) | compare |
| b2282 | nuoH | -1.6 | -2.7 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0677 | nagA | -1.5 | -6.3 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3911 | cpxA | -1.5 | -9.9 | two-component sensor protein (NCBI) | compare |
| b0688 | pgm | -1.5 | -3.3 | phosphoglucomutase (NCBI) | compare |
| b3870 | glnA | -1.5 | -3.9 | glutamine synthetase (NCBI) | compare |
| b3630 | rfaP | -1.5 | -9.0 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0737 | tolQ | -1.5 | -2.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1332 | ynaJ | -1.4 | -0.9 | predicted inner membrane protein (NCBI) | compare |
| b1273 | yciN | -1.4 | -1.8 | hypothetical protein (NCBI) | compare |
| b0928 | aspC | -1.4 | -4.7 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b3052 | rfaE | -1.4 | -4.0 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b2288 | nuoA | -1.4 | -2.9 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3390 | aroK | -1.4 | -2.2 | shikimate kinase I (NCBI) | compare |
| b2313 | cvpA | -1.4 | -2.0 | membrane protein required for colicin V production (NCBI) | compare |
| b0912 | ihfB | -1.4 | -4.7 | integration host factor subunit beta (NCBI) | compare |
| b0200 | gmhB | -1.3 | -0.9 | hypothetical protein (NCBI) | compare |
| b0101 | yacG | -1.3 | -3.7 | zinc-binding protein (NCBI) | compare |
| b1260 | trpA | -1.3 | -5.3 | tryptophan synthase subunit alpha (NCBI) | compare |
| b1235 | rssB | -1.3 | -5.7 | response regulator of RpoS (NCBI) | compare |
| b3237 | argR | -1.3 | -4.0 | arginine repressor (NCBI) | compare |
| b1563 | relE | -1.3 | -2.2 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b0584 | fepA | -1.3 | -9.6 | iron-enterobactin outer membrane transporter (NCBI) | compare |
| b2188 | yejM | -1.3 | -7.7 | predicted hydrolase, inner membrane (NCBI) | compare |
| b4232 | fbp | -1.3 | -7.7 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b2912 | ygfA | -1.3 | -2.5 | putative ligase (VIMSS) | compare |
| b3790 | rffC | -1.3 | -4.7 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0439 | lon | -1.3 | -4.5 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0739 | tolA | -1.3 | -2.8 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1103 | ycfF | -1.3 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1236 | galU | -1.3 | -3.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0222 | lpcA | -1.3 | -2.7 | phosphoheptose isomerase (NCBI) | compare |
| b3791 | rffA | -1.3 | -6.5 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1850 | eda | -1.3 | -1.9 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2350 | yfdG | -1.3 | -5.7 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b1252 | tonB | -1.2 | -3.1 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b3794 | rffM | -1.2 | -7.7 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3839 | tatC | -1.2 | -4.8 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3774 | ilvC | -1.2 | -9.8 | ketol-acid reductoisomerase (NCBI) | compare |
| b0730 | mngR | -1.2 | -1.8 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3778 | rep | -1.2 | -6.1 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b4676 | yoaK | -1.2 | -0.8 | expressed protein (RefSeq) | compare |
| b3613 | yibP | -1.2 | -3.3 | putative membrane protein (VIMSS) | compare |
| b1693 | aroD | -1.2 | -4.1 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3786 | rffE | -1.2 | -9.1 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3941 | metF | -1.2 | -9.0 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| b0564 | appY | -1.2 | -0.5 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b4435 | isrC | -1.2 | -2.1 | unknown RNA (NCBI) | compare |
| b2683 | ygaH | -1.2 | -4.2 | predicted inner membrane protein (NCBI) | compare |
| b2175 | spr | -1.1 | -4.1 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1175 | minD | -1.1 | -3.8 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0401 | brnQ | -1.1 | -7.7 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |
| b3842 | rfaH | -1.1 | -4.0 | transcriptional activator RfaH (NCBI) | compare |
| b1262 | trpC | -1.1 | -5.5 | N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) | compare |
| b0723 | sdhA | -1.1 | -7.3 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b3771 | ilvD | -1.1 | -7.9 | dihydroxy-acid dehydratase (NCBI) | compare |
| b3787 | rffD | -1.1 | -7.3 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b0676 | nagC | -1.1 | -6.7 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b2479 | gcvR | -1.1 | -3.7 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b1438 | ydcQ | -1.1 | -2.7 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2330 | yfcB | -1.1 | -2.0 | putative adenine-specific methylase (VIMSS) | compare |
| b4312 | fimB | -1.1 | -7.2 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b3199 | yrbK | -1.1 | -3.0 | hypothetical protein (NCBI) | compare |
| b3027 | ygiZ | -1.1 | -0.7 | conserved inner membrane protein (NCBI) | compare |
| b1048 | mdoG | -1.1 | -5.1 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b4317 | fimD | -1.1 | -9.6 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | compare |
| b1351 | racC | -1.1 | -0.7 | Rac prophage; predicted protein (NCBI) | compare |
| b2569 | lepA | -1.1 | -2.6 | GTP-binding protein LepA (NCBI) | compare |
| b2277 | nuoM | -1.0 | -4.5 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0721 | sdhC | -1.0 | -5.2 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b2894 | xerD | -1.0 | -0.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1183 | umuD | -1.0 | -2.4 | DNA polymerase V, subunit D (NCBI) | compare |
| b2276 | nuoN | -1.0 | -4.1 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3807 | cyaY | -1.0 | -5.4 | frataxin-like protein (NCBI) | compare |
| b3236 | mdh | -1.0 | -6.3 | malate dehydrogenase (NCBI) | compare |
| b3844 | fre | -1.0 | -3.9 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0724 | sdhB | -1.0 | -4.6 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b0728 | sucC | -1.0 | -5.0 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b3761 | trpT | -1.0 | -1.4 | tRNA-Trp (NCBI) | compare |
| b4451 | ryhB | -1.0 | -1.8 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b4042 | dgkA | -1.0 | -1.3 | diacylglycerol kinase (NCBI) | compare |
| b3035 | tolC | -1.0 | -5.6 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0920 | ycbC | -1.0 | -4.6 | conserved inner membrane protein (NCBI) | compare |
| b4314 | fimA | -1.0 | -4.8 | major type 1 subunit fimbrin (pilin) (NCBI) | compare |
| b4416 | rybA | -1.0 | -1.4 | unknown RNA (NCBI) | compare |
| b0232 | yafN | -1.0 | -0.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1677 | lpp | -1.0 | -1.8 | murein lipoprotein (NCBI) | compare |
| b3649 | rpoZ | -1.0 | -3.4 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b4048 | yjbM | -1.0 | -1.3 | hypothetical protein (NCBI) | compare |
| b2516 | yfgA | -1.0 | -4.8 | hypothetical protein (NCBI) | compare |
| b1040 | csgD | -1.0 | -1.6 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b0720 | gltA | -1.0 | -5.6 | citrate synthase (NCBI) | compare |
| b2897 | ygfY | -1.0 | -2.0 | hypothetical protein (NCBI) | compare |
| b2284 | nuoF | -0.9 | -2.6 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b3609 | secB | -0.9 | -3.5 | export protein SecB (NCBI) | compare |
| b2500 | purN | -0.9 | -4.5 | phosphoribosylglycinamide formyltransferase (NCBI) | compare |
| b2278 | nuoL | -0.9 | -4.6 | NADH dehydrogenase subunit L (NCBI) | compare |
| b4179 | vacB | -0.9 | -4.3 | putative enzyme (VIMSS) | compare |
| b0436 | tig | -0.9 | -5.1 | trigger factor (NCBI) | compare |
| b3414 | gntY | -0.9 | -3.3 | predicted gluconate transport associated protein (NCBI) | compare |
| b3838 | tatB | -0.9 | -4.1 | sec-independent translocase (NCBI) | compare |
| b1160 | elbA | -0.9 | -1.2 | hypothetical protein (NCBI) | compare |
| b0722 | sdhD | -0.9 | -3.0 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b3627 | rfaI | -0.9 | -5.3 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b3741 | gidA | -0.9 | -2.5 | glucose-inhibited division protein A (NCBI) | compare |
| b2600 | tyrA | -0.9 | -5.8 | fused chorismate mutase T/prephenate dehydrogenase (NCBI) | compare |
| b3005 | exbD | -0.9 | -3.1 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0386 | proC | -0.9 | -2.4 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1279 | yciS | -0.9 | -0.8 | conserved inner membrane protein (NCBI) | compare |
| b2599 | pheA | -0.9 | -5.4 | fused chorismate mutase P/prephenate dehydratase (NCBI) | compare |
| b2283 | nuoG | -0.9 | -3.8 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1827 | kdgR | -0.9 | -2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1837 | yebW | -0.9 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1712 | ihfA | -0.9 | -1.5 | integration host factor subunit alpha (NCBI) | compare |
| b1426 | ydcH | -0.9 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0542 | renD | -0.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1231 | tyrT | -0.9 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b0015 | dnaJ | -0.9 | -5.7 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b0729 | sucD | -0.8 | -3.0 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1258 | yciF | -0.8 | -0.8 | hypothetical protein (NCBI) | compare |
| b4701 | sokX | -0.8 | -0.9 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1557 | cspB | -0.8 | -1.4 | Qin prophage; cold shock protein (NCBI) | compare |
| b1961 | dcm | -0.8 | -1.6 | DNA cytosine methylase (NCBI) | compare |
| b3405 | ompR | -0.8 | -2.7 | osmolarity response regulator (NCBI) | compare |
| b0080 | fruR | -0.8 | -3.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1049 | mdoH | -0.8 | -4.9 | glucosyltransferase MdoH (NCBI) | compare |
| b1855 | lpxM | -0.8 | -3.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b2642 | yfjW | -0.8 | -0.7 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2287 | nuoB | -0.8 | -2.4 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1368 | ynaA | -0.8 | -2.5 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b2286 | nuoC | -0.8 | -3.2 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3181 | greA | -0.8 | -3.8 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0001 | thrL | -0.8 | -0.9 | thr operon leader peptide (NCBI) | compare |
| b2990 | hybG | -0.8 | -1.5 | hydrogenase 2 accessory protein (NCBI) | compare |
| b1594 | dgsA | -0.8 | -2.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0741 | pal | -0.8 | -2.0 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3784 | rfe | -0.8 | -6.4 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |