| | gene | name | fitness | t score | description | |
|---|
| b0523 | purE | -4.3 | -4.9 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b0142 | folK | -4.0 | -1.5 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b4006 | purH | -3.7 | -15.9 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b4005 | purD | -3.5 | -16.0 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b2312 | purF | -3.5 | -7.5 | amidophosphoribosyltransferase (NCBI) | compare |
| b2557 | purL | -3.4 | -13.5 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b2476 | purC | -3.2 | -4.3 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b2499 | purM | -2.7 | -7.6 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b4651 | yibW | -2.4 | -1.6 | no description | compare |
| b3619 | rfaD | -2.3 | -6.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b4388 | serB | -2.2 | -11.6 | 3-phosphoserine phosphatase (NCBI) | compare |
| b0522 | purK | -1.9 | -9.3 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b2913 | serA | -1.8 | -9.4 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b2830 | nudH | -1.7 | -2.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3621 | rfaC | -1.7 | -7.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3341 | rpsG | -1.7 | -2.1 | 30S ribosomal protein S7 (NCBI) | compare |
| b2934 | cmtB | -1.6 | -1.6 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4245 | pyrB | -1.6 | -10.2 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b1861 | ruvA | -1.6 | -1.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2567 | rnc | -1.6 | -1.1 | ribonuclease III (NCBI) | compare |
| b3642 | pyrE | -1.6 | -5.4 | orotate phosphoribosyltransferase (NCBI) | compare |
| b3052 | rfaE | -1.6 | -5.2 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b2784 | relA | -1.6 | -10.1 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b1062 | pyrC | -1.6 | -9.5 | dihydroorotase (NCBI) | compare |
| b0564 | appY | -1.6 | -1.4 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3863 | polA | -1.5 | -1.4 | DNA polymerase I (NCBI) | compare |
| b1281 | pyrF | -1.5 | -3.9 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b1865 | nudB | -1.5 | -2.3 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0945 | pyrD | -1.5 | -8.5 | dihydroorotate dehydrogenase (NCBI) | compare |
| b0033 | carB | -1.4 | -11.6 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b0032 | carA | -1.3 | -6.9 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b0907 | serC | -1.3 | -7.0 | phosphoserine aminotransferase (NCBI) | compare |
| b0401 | brnQ | -1.3 | -9.2 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |
| b2313 | cvpA | -1.3 | -2.3 | membrane protein required for colicin V production (NCBI) | compare |
| b2894 | xerD | -1.2 | -1.2 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0889 | lrp | -1.2 | -3.1 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b1863 | ruvC | -1.2 | -1.7 | Holliday junction resolvase (NCBI) | compare |
| b3916 | pfkA | -1.2 | -3.1 | 6-phosphofructokinase (NCBI) | compare |
| b3620 | rfaF | -1.2 | -4.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1291 | sapD | -1.1 | -1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1709 | btuD | -1.1 | -1.2 | vitamin B12-transporter ATPase (NCBI) | compare |
| b3741 | gidA | -1.1 | -4.0 | glucose-inhibited division protein A (NCBI) | compare |
| b3706 | trmE | -1.0 | -3.7 | tRNA modification GTPase (NCBI) | compare |
| b4676 | yoaK | -1.0 | -0.7 | expressed protein (RefSeq) | compare |
| b2528 | iscA | -1.0 | -1.5 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4171 | miaA | -1.0 | -2.5 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0737 | tolQ | -1.0 | -2.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1506 | yneL | -1.0 | -1.7 | predicted transcriptional regulator (NCBI) | compare |
| b1257 | yciE | -1.0 | -0.6 | hypothetical protein (NCBI) | compare |
| b3778 | rep | -1.0 | -5.2 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3842 | rfaH | -0.9 | -4.5 | transcriptional activator RfaH (NCBI) | compare |
| b3405 | ompR | -0.9 | -3.7 | osmolarity response regulator (NCBI) | compare |
| b2501 | ppk | -0.9 | -5.5 | polyphosphate kinase (NCBI) | compare |
| b0145 | dksA | -0.9 | -2.3 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3811 | xerC | -0.9 | -1.4 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1954 | dsrA | -0.9 | -2.6 | regulatory antisense RNA (NCBI) | compare |
| b3631 | rfaG | -0.9 | -7.4 | glucosyltransferase I (NCBI) | compare |
| b1258 | yciF | -0.9 | -0.8 | hypothetical protein (NCBI) | compare |
| b0053 | surA | -0.9 | -3.3 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3082 | ygjM | -0.9 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2318 | truA | -0.9 | -3.0 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0738 | tolR | -0.9 | -2.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0222 | lpcA | -0.8 | -1.8 | phosphoheptose isomerase (NCBI) | compare |
| b3026 | qseC | -0.8 | -3.2 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4481 | rffT | -0.8 | -4.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1882 | cheY | -0.8 | -0.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3630 | rfaP | -0.8 | -6.2 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b4647 | mokA | -0.8 | -0.7 | no description | compare |
| b0949 | uup | -0.8 | -4.8 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2168 | fruK | -0.8 | -1.1 | 1-phosphofructokinase (NCBI) | compare |
| b3839 | tatC | -0.8 | -4.1 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3387 | dam | -0.8 | -6.2 | DNA adenine methylase (NCBI) | compare |
| b3500 | gor | -0.8 | -1.6 | glutathione reductase (NCBI) | compare |
| b3169 | nusA | -0.8 | -2.9 | transcription elongation factor NusA (NCBI) | compare |
| b3238 | yhcN | -0.8 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b4701 | sokX | -0.7 | -0.9 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2329 | aroC | -0.7 | -3.0 | chorismate synthase (NCBI) | compare |
| b0247 | ykfG | -0.7 | -1.5 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1058 | yceO | -0.7 | -0.3 | hypothetical protein (NCBI) | compare |
| b4345 | mcrC | -0.7 | -0.8 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b4239 | treC | -0.7 | -1.6 | trehalose-6-P hydrolase (NCBI) | compare |
| b4042 | dgkA | -0.7 | -1.5 | diacylglycerol kinase (NCBI) | compare |
| b3979 | thrT | -0.7 | -0.4 | tRNA-Thr (NCBI) | compare |
| b3977 | tyrU | -0.7 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b2350 | yfdG | -0.7 | -4.2 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b0798 | ybiA | -0.7 | -2.2 | hypothetical protein (NCBI) | compare |
| b0505 | allA | -0.7 | -2.7 | ureidoglycolate hydrolase (NCBI) | compare |
| b1545 | pinQ | -0.7 | -0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1279 | yciS | -0.7 | -0.9 | conserved inner membrane protein (NCBI) | compare |
| b2579 | yfiD | -0.7 | -1.7 | pyruvate formate lyase subunit (NCBI) | compare |
| b1252 | tonB | -0.7 | -2.6 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b4552 | yrhC | -0.7 | -0.6 | no description | compare |
| b4025 | pgi | -0.6 | -4.5 | glucose-6-phosphate isomerase (NCBI) | compare |
| b4246 | pyrL | -0.6 | -2.0 | pyrBI operon leader peptide (NCBI) | compare |
| b3973 | birA | -0.6 | -1.5 | biotin--protein ligase (NCBI) | compare |
| b0049 | apaH | -0.6 | -1.5 | diadenosinetetraphosphatase (NCBI) | compare |
| b3613 | yibP | -0.6 | -2.5 | putative membrane protein (VIMSS) | compare |
| b2352 | yfdI | -0.6 | -0.4 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b2820 | recB | -0.6 | -0.6 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1141 | ymfG | -0.6 | -1.5 | e14 prophage; predicted excisionase (NCBI) | compare |
| b1677 | lpp | -0.6 | -1.1 | murein lipoprotein (NCBI) | compare |
| b2620 | smpB | -0.6 | -0.7 | SsrA-binding protein (NCBI) | compare |
| b1236 | galU | -0.6 | -2.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3443 | yrhA | -0.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3838 | tatB | -0.6 | -3.6 | sec-independent translocase (NCBI) | compare |
| b0303 | ykgI | -0.6 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1085 | b1085 | -0.6 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2188 | yejM | -0.6 | -4.0 | predicted hydrolase, inner membrane (NCBI) | compare |
| b1361 | ydaW | -0.6 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b1150 | ymfR | -0.6 | -0.7 | e14 prophage; predicted protein (NCBI) | compare |
| b0502 | ylbG | -0.6 | -2.4 | no description | compare |
| b1539 | ydfG | -0.6 | -2.4 | L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b0843 | ybjH | -0.6 | -1.2 | hypothetical protein (NCBI) | compare |
| b1025 | ycdT | -0.5 | -1.3 | predicted diguanylate cyclase (NCBI) | compare |
| b1159 | mcrA | -0.5 | -0.7 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b3389 | aroB | -0.5 | -4.1 | 3-dehydroquinate synthase (NCBI) | compare |
| b0740 | tolB | -0.5 | -1.9 | translocation protein TolB precursor (NCBI) | compare |
| b4177 | purA | -0.5 | -0.4 | adenylosuccinate synthetase (NCBI) | compare |
| b4414 | tff | -0.5 | -2.3 | unknown RNA (NCBI) | compare |
| b2082 | ogrK | -0.5 | -2.3 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b0688 | pgm | -0.5 | -1.7 | phosphoglucomutase (NCBI) | compare |
| b3164 | pnp | -0.5 | -1.4 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4631 | ykgQ | -0.5 | -1.2 | no description | compare |
| b3791 | rffA | -0.5 | -3.6 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0167 | glnD | -0.5 | -2.7 | PII uridylyl-transferase (NCBI) | compare |
| b3792 | wzxE | -0.5 | -3.0 | O-antigen translocase (NCBI) | compare |
| b0890 | ftsK | -0.5 | -1.9 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3790 | rffC | -0.5 | -2.7 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2822 | recC | -0.5 | -2.5 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2768 | ygcP | -0.5 | -2.5 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b3786 | rffE | -0.5 | -4.3 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3794 | rffM | -0.5 | -3.8 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1942 | fliJ | -0.5 | -0.9 | flagellar biosynthesis chaperone (NCBI) | compare |
| b0232 | yafN | -0.5 | -0.4 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b4435 | isrC | -0.5 | -1.0 | unknown RNA (NCBI) | compare |
| b4202 | rpsR | -0.5 | -0.9 | 30S ribosomal protein S18 (NCBI) | compare |
| b1351 | racC | -0.5 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b0881 | clpS | -0.5 | -1.2 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b3787 | rffD | -0.5 | -4.0 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b0438 | clpX | -0.5 | -2.5 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2951 | yggS | -0.5 | -2.6 | predicted enzyme (NCBI) | compare |
| b3911 | cpxA | -0.5 | -3.7 | two-component sensor protein (NCBI) | compare |
| b0216 | aspV | -0.5 | -2.6 | tRNA-Asp (NCBI) | compare |
| b1557 | cspB | -0.5 | -1.1 | Qin prophage; cold shock protein (NCBI) | compare |
| b1730 | ydjO | -0.5 | -0.8 | predicted protein (RefSeq) | compare |
| b4685 | yrbN | -0.5 | -1.3 | expressed protein (RefSeq) | compare |
| b1984 | asnW | -0.5 | -0.6 | tRNA-Asn (NCBI) | compare |
| b4179 | vacB | -0.5 | -2.3 | putative enzyme (VIMSS) | compare |
| b0585 | fes | -0.5 | -2.3 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b0589 | fepG | -0.5 | -3.1 | iron-enterobactin transporter subunit (NCBI) | compare |
| b4178 | yjeB | -0.5 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1765 | ydjA | -0.5 | -0.5 | predicted oxidoreductase (NCBI) | compare |
| b3006 | exbB | -0.5 | -3.3 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1977 | asnT | -0.5 | -1.6 | tRNA-Asn (NCBI) | compare |
| b1810 | yoaC | -0.5 | -2.8 | predicted protein (RefSeq) | compare |
| b1226 | narJ | -0.5 | -2.4 | molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 (NCBI) | compare |
| b1550 | b1550 | -0.5 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1651 | gloA | -0.5 | -1.5 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b4590 | ybfK | -0.5 | -0.5 | hypothetical protein (RefSeq) | compare |
| b1676 | pykF | -0.5 | -1.6 | pyruvate kinase (NCBI) | compare |
| b3237 | argR | -0.4 | -2.2 | arginine repressor (NCBI) | compare |
| b2215 | ompC | -0.4 | -2.9 | outer membrane porin protein C (NCBI) | compare |
| b1689 | b1689 | -0.4 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b4451 | ryhB | -0.4 | -0.9 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b2659 | b2659 | -0.4 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1269 | rluB | -0.4 | -1.6 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b4181 | yjfI | -0.4 | -2.0 | hypothetical protein (NCBI) | compare |
| b4538 | yoeF | -0.4 | -0.9 | hypothetical protein (RefSeq) | compare |
| b1409 | ynbB | -0.4 | -0.5 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b1185 | dsbB | -0.4 | -1.1 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b4093 | phnO | -0.4 | -1.6 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0508 | hyi | -0.4 | -1.8 | hydroxypyruvate isomerase (NCBI) | compare |
| b0784 | moaD | -0.4 | -1.2 | molybdopterin synthase, small subunit (NCBI) | compare |
| b0584 | fepA | -0.4 | -2.7 | iron-enterobactin outer membrane transporter (NCBI) | compare |
| b1165 | ymgA | -0.4 | -0.3 | hypothetical protein (NCBI) | compare |
| b1563 | relE | -0.4 | -1.0 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b0592 | fepB | -0.4 | -3.1 | iron-enterobactin transporter subunit (NCBI) | compare |
| b2175 | spr | -0.4 | -1.3 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0113 | pdhR | -0.4 | -1.9 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b0097 | yacA | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1504 | ydeS | -0.4 | -2.0 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b2330 | yfcB | -0.4 | -0.5 | putative adenine-specific methylase (VIMSS) | compare |
| b0908 | aroA | -0.4 | -2.5 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3199 | yrbK | -0.4 | -1.3 | hypothetical protein (NCBI) | compare |
| b1789 | yeaL | -0.4 | -1.7 | conserved inner membrane protein (NCBI) | compare |
| b4694 | yagP | -0.4 | -1.3 | no description | compare |
| b1012 | b1012 | -0.4 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0471 | ybaB | -0.4 | -1.9 | hypothetical protein (NCBI) | compare |
| b0588 | fepC | -0.4 | -2.8 | iron-enterobactin transporter subunit (NCBI) | compare |
| b0226 | dinJ | -0.4 | -2.5 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1536 | ydeI | -0.4 | -0.6 | hypothetical protein (NCBI) | compare |
| b1044 | ymdA | -0.4 | -2.3 | hypothetical protein (NCBI) | compare |
| b1427 | rimL | -0.4 | -1.3 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b1553 | ydfP | -0.4 | -0.9 | Qin prophage; conserved protein (NCBI) | compare |
| b3290 | trkA | -0.4 | -0.8 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1332 | ynaJ | -0.4 | -0.3 | predicted inner membrane protein (NCBI) | compare |
| b3180 | yhbY | -0.4 | -2.4 | predicted RNA-binding protein (NCBI) | compare |
| b2426 | ucpA | -0.4 | -1.2 | putative oxidoreductase (VIMSS) | compare |
| b2569 | lepA | -0.4 | -1.4 | GTP-binding protein LepA (NCBI) | compare |
| b3935 | priA | -0.4 | -1.0 | primosome assembly protein PriA (NCBI) | compare |