Experiment set31S729 for Pseudomonas simiae WCS417
Time6-phageFRS
Group: phage moi 100Media: MM2_plus_SM_buffer
Culturing: fluoroDangl_ML3, 10mL in 25mL erlen, Aerobic, at 28.5 (C), shaken=orbital, continuous
By: Katie on 2/7/24
Specific Phenotypes
For 3 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Biotin biosynthesis | 2 |
| Siderophore Pyoverdine | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| 8-amino-7-oxononanoate biosynthesis III | 2 | 1 | 1 |
| 8-amino-7-oxononanoate biosynthesis II | 2 | 1 | 1 |
| biotin biosynthesis from 8-amino-7-oxononanoate I | 4 | 4 | 1 |
| 8-amino-7-oxononanoate biosynthesis IV | 5 | 4 | 1 |
| biotin biosynthesis II | 6 | 4 | 1 |
| biotin biosynthesis I | 15 | 14 | 2 |
| 8-amino-7-oxononanoate biosynthesis I | 11 | 10 | 1 |