Experiment set31IT077 for Pseudomonas putida KT2440

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NoPredeControl

200 most important genes:

  gene name fitness t score description  
PP_0856 -3.8 -9.1 conserved lipoprotein of unknown function compare
PP_4999 -3.4 -2.3 dihydroorotase-like protein compare
PP_4804 -3.3 -5.0 RlpA-like lipoprotein compare
PP_1232 -3.2 -9.3 conserved exported protein of unknown function compare
PP_0719 -3.2 -3.8 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_4693 -3.1 -7.5 RNA polymerase-binding transcription factor DksA compare
PP_4724 -3.1 -2.1 Carbamoyl-phosphate synthase small chain compare
PP_2646 -3.0 -4.1 conserved protein of unknown function compare
PP_2645 -3.0 -11.5 magnesium transporter, ATP-dependent compare
PP_4058 -2.9 -13.6 1,4-alpha-glucan branching enzyme compare
PP_2088 -2.9 -5.1 RNA polymerase sigma factor SigX compare
PP_1224 -2.9 -9.4 periplasmic subunit of the TolQRA transport system compare
PP_4799 -2.8 -1.9 putative Muramoyltetrapeptide carboxypeptidase compare
PP_4723 -2.8 -4.2 Carbamoyl-phosphate synthase large chain compare
PP_4994 -2.5 -5.9 conserved protein of unknown function compare
PP_4700 -2.4 -5.0 pantothenate synthetase compare
PP_1898 -2.3 -5.4 MotA/TolQ/ExbB proton channel family protein compare
PP_0127 -2.2 -2.9 Thiol:disulfide interchange protein compare
PP_4785 -2.2 -6.3 conserved exported protein of unknown function compare
PP_0833 -2.2 -3.1 queuine tRNA-ribosyltransferase compare
PP_3245 -1.9 -3.1 conserved protein of unknown function compare
PP_2322 -1.7 -3.7 Major outer membrane lipoprotein compare
PP_1322 -1.6 -2.8 putative Lipoprotein compare
PP_3244 -1.6 -4.2 Magnesium transporter, MgtC family compare
PP_4895 -1.6 -3.6 tRNA dimethylallyltransferase compare
PP_4937 -1.6 -5.7 toluene tolerance protein compare
PP_2336 -1.5 -4.9 aconitate hydratase 1 compare
PP_2000 -1.5 -2.8 amidophosphoribosyl transferase compare
PP_0753 -1.5 -6.6 putative Lipoprotein compare
PP_0905 -1.4 -3.0 conserved exported protein of unknown function compare
PP_1656 -1.4 -4.1 ATP:GTP 3'-pyrophosphotransferase compare
PP_1734 -1.3 -4.1 Probable septum site-determining protein MinC compare
PP_4964 -1.3 -3.5 D-erythrose 4-phosphate dehydrogenase compare
PP_4943 -1.2 -2.6 putative Glycosyl transferase compare
PP_4213 -1.2 -2.7 putative dipeptidase compare
PP_1214 -1.1 -2.9 putative transcriptional regulatory protein compare
PP_2163 -1.1 -5.5 VacJ lipoprotein compare
PP_4008 -1.1 -5.7 ATP-dependent serine protease compare
PP_5748 -1.1 -2.0 cytochrome c heme lyase subunit compare
PP_5393 -1.1 -1.7 putative metal-binding chaperone compare
PP_0164 -1.0 -3.6 conserved protein of unknown function compare
PP_5248 -1.0 -1.8 putative hydrolase compare
PP_0958 -1.0 -4.4 phospholipid ABC transporter ATP-binding subunit compare
PP_1428 -1.0 -1.9 Sigma factor AlgU negative regulatory protein compare
PP_4902 -1.0 -2.9 Oligoribonuclease compare
PP_0345 -1.0 -3.1 putative Heptose kinase WapP compare
PP_1217 -1.0 -2.9 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_4265 -1.0 -1.9 DNA-binding transcriptional dual regulator compare
PP_1268 -1.0 -2.3 putative HtrA suppressor protein sohA compare
PP_2442 -1.0 -3.0 conserved protein of unknown function, DUF480 family compare
PP_1215 -1.0 -2.2 Crossover junction endodeoxyribonuclease RuvC compare
PP_4726 -1.0 -2.3 Chaperone protein DnaJ compare
PP_3821 -0.9 -5.9 UTP-glucose-1-phosphate uridylyltransferase compare
PP_0960 -0.9 -3.3 phospholipid ABC transporter binding protein compare
PP_1733 -0.9 -2.6 membrane ATPase of the MinC-MinD-MinE system compare
PP_4204 -0.9 -2.5 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor compare
PP_0809 -0.9 -5.6 disulfide bond formation protein B compare
PP_1702 -0.9 -3.5 Recombination-associated protein RdgC compare
PP_2087 -0.9 -2.8 CmpX protein compare
PP_0959 -0.9 -2.5 phospholipid ABC transporter compare
PP_0801 -0.9 -1.6 conserved exported protein of unknown function compare
PP_2307 -0.9 -1.1 conserved protein of unknown function compare
PP_5139 -0.9 -3.9 cadmium translocating P-type ATPase compare
PP_0961 -0.9 -5.1 toluene tolerance protein compare
PP_1293 -0.9 -2.3 molybdopterin synthase small subunit compare
PP_0834 -0.9 -2.3 Sec translocation complex subunit YajC compare
PP_0725 -0.9 -4.5 conserved hypothetical TPR repeat protein compare
PP_4261 -0.9 -2.9 cation-transporting P-type ATPase compare
PP_0691 -0.9 -1.7 Glutamate 5-kinase compare
PP_1128 -0.8 -3.2 OmpA family protein compare
PP_0962 -0.8 -1.5 toluene-tolerance protein compare
PP_4819 -0.8 -3.5 conserved protein of unknown function compare
PP_5140 -0.8 -1.7 Transcriptional regulator, MerR family compare
PP_2433 -0.8 -1.4 conserved protein of unknown function compare
PP_5552 -0.8 -1.9 conserved protein of unknown function compare
PP_0406 -0.8 -1.7 Nucleotidyltransferase family protein compare
PP_0852 -0.8 -3.4 Transcriptional regulator, Cro/CI family compare
PP_4941 -0.8 -4.4 conserved exported protein of unknown function compare
PP_1468 -0.7 -2.4 Tyrosine recombinase XerD compare
PP_3064 -0.7 -1.5 Phage tail protein compare
PP_4620 -0.7 -4.2 Fumarylacetoacetase compare
PP_4143 -0.7 -3.2 conserved protein of unknown function compare
PP_4131 -0.7 -3.2 NADH-quinone oxidoreductase subunit N compare
PP_5504 -0.7 -3.5 conserved protein of unknown function compare
PP_1493 -0.7 -2.1 chemotaxis response regulator protein-glutamate methylesterase of group 3 operon compare
PP_4379 -0.7 -2.4 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_2337 -0.7 -1.3 aconitate isomerase compare
PP_0435 -0.7 -3.6 Peptidase, M23/M37 family compare
PP_4286 -0.7 -3.9 allantoinase compare
PP_2203 -0.7 -1.7 conserved protein of unknown function compare
PP_2633 -0.7 -1.6 conserved protein of unknown function compare
PP_4619 -0.7 -3.3 Maleylacetoacetate isomerase compare
PP_3460 -0.7 -2.0 quinohemoprotein amine dehydrogenase, gamma subunit compare
PP_1553 -0.7 -1.9 conserved protein of unknown function compare
PP_1994 -0.7 -2.0 tRNA pseudouridine (38-40)synthase compare
PP_0893 -0.7 -1.5 ThiJ/PfpI family protein compare
PP_4129 -0.6 -2.2 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_1779 -0.6 -3.5 Lipopolysaccharide ABC export system, ATP-binding protein compare
PP_2299 -0.6 -2.4 Trigger factor compare
PP_0949 -0.6 -4.0 putative ATP-binding protein UPF0042 compare
PP_1164 -0.6 -1.6 Transcriptional regulator, LysR family compare
PP_4392 -0.6 -3.8 chemotaxis protein methyltransferase compare
PP_2320 -0.6 -4.4 conserved exported protein of unknown function compare
PP_0184 -0.6 -3.8 Argininosuccinate lyase compare
PP_5661 -0.6 -2.8 putative lipoprotein compare
PP_1237 -0.6 -1.0 4-hydroxy-tetrahydrodipicolinate synthase compare
PP_5500 -0.6 -1.1 protein of unknown function compare
PP_2972 -0.6 -1.7 conserved protein of unknown function compare
PP_0292 -0.6 -1.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_0593 -0.6 -1.0 putative ribosome-binding factor compare
PP_3726 -0.6 -1.3 Enoyl-CoA hydratase/isomerase family protein compare
PP_5508 -0.6 -1.1 conserved protein of unknown function compare
PP_2402 -0.6 -1.5 putative Sensor histidine kinase compare
PP_2067 -0.6 -2.5 putative EmrB/QacA family drug resistance transporter compare
PP_0984 -0.6 -1.8 conserved membrane protein of unknown function compare
PP_4009 -0.6 -2.7 ATP-dependent Clp protease adapter protein ClpS compare
PP_2511 -0.6 -2.2 conserved protein of unknown function compare
PP_2970 -0.6 -2.1 conserved exported protein of unknown function compare
PP_5533 -0.6 -1.2 conserved protein of unknown function compare
PP_3048 -0.6 -1.6 conserved protein of unknown function compare
PP_5225 -0.6 -1.2 frataxin compare
PP_1319 -0.6 -2.2 Ubiquinol--cytochrome c reductase, cytochrome c1 compare
PP_4720 -0.6 -1.8 putative RNA binding protein compare
PP_5310 -0.6 -3.4 junction-specific ATP-dependent DNA helicase compare
PP_5487 -0.6 -2.1 conserved protein of unknown function compare
PP_5492 -0.6 -3.1 conserved protein of unknown function compare
PP_4879 -0.6 -2.5 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB compare
PP_0556 -0.6 -1.8 Acetoin catabolism protein compare
PP_2976 -0.6 -1.3 putative transposase compare
PP_4482 -0.5 -2.5 Transcriptional regulator, AraC family compare
PP_1206 -0.5 -3.6 basic-amino-acid specific porin OprD compare
PP_5619 -0.5 -2.2 protein of unknown function compare
PP_4066 -0.5 -1.6 methylglutaconyl-CoA hydratase compare
PP_2331 -0.5 -2.9 conserved membrane protein of unknown function compare
PP_1066 -0.5 -2.0 C4-dicarboxylate transport transcriptional regulatory protein compare
PP_4342 -0.5 -1.9 flagellar synthesis regulator, putative ATPase compare
PP_3738 -0.5 -2.3 putative Transcriptional regulator VanR compare
PP_2192 -0.5 -1.7 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein compare
PP_0978 -0.5 -1.4 conserved protein of unknown function compare
PP_5589 -0.5 -1.9 protein of unknown function containing Rhs repeat-associated core domain compare
PP_4124 -0.5 -2.0 NADH-quinone oxidoreductase subunit G compare
PP_5600 -0.5 -1.9 conserved protein of unknown function compare
PP_5328 -0.5 -1.3 putative phosphate transport system permease protein compare
PP_4004 -0.5 -2.3 DNA translocase FtsK compare
PP_5058 -0.5 -2.7 Carboxy-terminal-processing protease compare
PP_0547 -0.5 -2.2 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PP_1397 -0.5 -2.1 conserved protein of unknown function compare
PP_1876 -0.5 -1.9 putative ATP/GTP-binding protein of the AAA+ family compare
PP_2217 -0.5 -1.2 enoyl-CoA hydratase compare
PP_4930 -0.5 -1.6 putative small multidrug resistance protein compare
PP_4532 -0.5 -1.2 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis compare
PP_1326 -0.5 -1.3 16S rRNA 2'-O-ribose C1402 methyltransferase compare
PP_4387 -0.5 -1.6 conserved exported protein of unknown function compare
PP_3519 -0.5 -0.9 putative Lipoprotein compare
PP_5717 -0.5 -1.4 conserved protein of unknown function compare
PP_2462 -0.5 -1.2 conserved protein of unknown function compare
PP_2575 -0.5 -1.3 conserved exported protein of unknown function compare
PP_2740 -0.5 -1.1 Transcriptional regulator, MerR family compare
PP_0293 -0.5 -1.0 Imidazole glycerol phosphate synthase subunit HisF compare
PP_4233 -0.5 -2.3 putative Oxidoreductase, small subunit compare
PP_1216 -0.5 -1.6 Holliday junction ATP-dependent DNA helicase RuvA compare
PP_t13 -0.5 -1.7 tRNA-Lys compare
PP_3487 -0.5 -1.7 conserved exported protein of unknown function compare
PP_5289 -0.5 -2.1 Acetylglutamate kinase compare
PP_1083 -0.5 -1.7 (2Fe-2S)-binding protein compare
PP_0422 -0.5 -2.4 Indole-3-glycerol phosphate synthase compare
PP_2514 -0.5 -2.3 4-carboxy-4-hydroxy-2-oxoadipic acid aldolase compare
PP_2814 -0.5 -2.5 conserved protein of unknown function compare
PP_4591 -0.5 -2.0 Ribonuclease D compare
PP_5256 -0.5 -1.7 Cyclic nucleotide-binding protein compare
PP_5084 -0.5 -3.5 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase compare
PP_0685 -0.5 -1.4 conserved protein of unknown function compare
PP_3034 -0.5 -1.4 putative Regulator protein compare
PP_3398 -0.5 -1.5 putative Curli fiber surface-exposed nucleator CsgB compare
PP_2214 -0.5 -2.2 3-hydroxyacyl-CoA dehydrogenase type-2 compare
PP_1398 -0.5 -2.4 conserved protein of unknown function compare
PP_1294 -0.5 -1.9 molybdopterin synthase large subunit compare
PP_1778 -0.5 -2.9 Lipopolysaccharide ABC export system, permease protein compare
PP_3284 -0.5 -2.0 enoyl-CoA hydratase-isomerase compare
PP_2497 -0.5 -1.6 conserved protein of unknown function compare
PP_0291 -0.5 -2.2 conserved protein of unknown function compare
PP_5575 -0.5 -1.3 conserved protein of unknown function compare
PP_1097 -0.5 -0.6 Methionine--tRNA ligase compare
PP_1935 -0.5 -1.6 Transcriptional regulator, Cro/CI family compare
PP_4940 -0.5 -3.1 Putative glycosyltransferase compare
PP_5229 -0.5 -2.0 conserved protein of unknown function compare
PP_1598 -0.5 -1.8 regulatory intramembrane protein RIP zinc protease compare
PP_2105 -0.5 -1.8 conserved protein of unknown function compare
PP_4073 -0.5 -1.0 conserved exported protein of unknown function compare
PP_1248 -0.5 -2.3 Transporter, LysE family compare
PP_1265 -0.5 -1.5 conserved protein of unknown function compare
PP_4917 -0.4 -2.5 3',5'-cyclic-nucleotide phosphodiesterase compare
PP_0241 -0.4 -1.3 Transporter compare
PP_0141 -0.4 -1.8 putative ABC transporter, ATP-binding protein compare
PP_4981 -0.4 -1.0 polyisoprene-binding protein, acidic stress response factor compare
PP_2737 -0.4 -1.1 Oxidoreductase, short-chain dehydrogenase/reductase family compare
PP_4268 -0.4 -0.7 nucleoid-associated broad specificity regulator compare
PP_0903 -0.4 -1.9 conserved protein of unknown function compare
PP_1736 -0.4 -1.4 conserved protein of unknown function compare
PP_4952 -0.4 -1.0 ATP-dependent RNA helicase, specific for 23S rRNA compare


Specific Phenotypes

For 1 genes in this experiment