| | gene | name | fitness | t score | description | |
|---|
| b3261 | fis | +2.5 | 9.2 | DNA-binding protein Fis (NCBI) | compare |
| b3643 | rph | +1.7 | 4.5 | ribonuclease PH (NCBI) | compare |
| b3979 | thrT | +1.6 | 1.3 | tRNA-Thr (NCBI) | compare |
| b2808 | gcvA | +1.3 | 7.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0059 | hepA | +1.2 | 11.0 | ATP-dependent helicase HepA (NCBI) | compare |
| b0630 | lipB | +1.1 | 2.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2904 | gcvH | +1.1 | 3.6 | glycine cleavage system protein H (NCBI) | compare |
| b2189 | proL | +1.0 | 2.8 | tRNA-Pro (NCBI) | compare |
| b2903 | gcvP | +0.9 | 8.2 | glycine dehydrogenase (NCBI) | compare |
| b2951 | yggS | +0.9 | 5.6 | predicted enzyme (NCBI) | compare |
| b3387 | dam | +0.9 | 7.3 | DNA adenine methylase (NCBI) | compare |
| b4203 | rplI | +0.9 | 4.4 | 50S ribosomal protein L9 (NCBI) | compare |
| b3260 | dusB | +0.8 | 2.4 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b3181 | greA | +0.8 | 4.0 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b3977 | tyrU | +0.8 | 1.2 | tRNA-Tyr (NCBI) | compare |
| b4592 | yccB | +0.8 | 2.6 | hypothetical protein (RefSeq) | compare |
| b2236 | yfaE | +0.7 | 2.8 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b2905 | gcvT | +0.7 | 4.0 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b0014 | dnaK | +0.7 | 1.4 | molecular chaperone DnaK (NCBI) | compare |
| b4048 | yjbM | +0.7 | 1.5 | hypothetical protein (NCBI) | compare |
| b0661 | miaB | +0.7 | 5.0 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b0881 | clpS | +0.7 | 1.9 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b2058 | wcaB | +0.6 | 1.2 | predicted acyl transferase (NCBI) | compare |
| b1569 | dicC | +0.6 | 3.0 | Qin prophage; DNA-binding transcriptional regulator for DicB (NCBI) | compare |
| b3206 | npr | +0.6 | 4.9 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b1151 | ymfO | +0.6 | 1.8 | e14 prophage; conserved protein (RefSeq) | compare |
| b1480 | sra | +0.6 | 1.3 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b1607 | ydgC | +0.6 | 0.9 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b4655 | ythA | +0.6 | 0.9 | expressed protein (RefSeq) | compare |
| b3844 | fre | +0.6 | 3.8 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1790 | yeaM | +0.6 | 2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4000 | hupA | +0.6 | 3.4 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1550 | b1550 | +0.6 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4375 | prfC | +0.6 | 3.0 | peptide chain release factor 3 (NCBI) | compare |
| b2597 | yfiA | +0.6 | 1.7 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b1630 | rsxD | +0.6 | 3.0 | electron transport complex protein RnfD (NCBI) | compare |
| b4171 | miaA | +0.6 | 2.4 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1823 | cspC | +0.6 | 1.8 | stress protein, member of the CspA-family (NCBI) | compare |
| b2297 | pta | +0.6 | 0.8 | phosphate acetyltransferase (NCBI) | compare |
| b2618 | b2618 | +0.6 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1236 | galU | +0.6 | 3.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b4519 | icdC | +0.6 | 2.2 | no description | compare |
| b3164 | pnp | +0.5 | 2.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b1921 | fliZ | +0.5 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1253 | yciA | +0.5 | 2.7 | predicted hydrolase (NCBI) | compare |
| b4373 | rimI | +0.5 | 1.8 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b1963 | b1963 | +0.5 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2083 | yegZ | +0.5 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0866 | ybjQ | +0.5 | 1.1 | hypothetical protein (NCBI) | compare |
| b4522 | yciX_1 | +0.5 | 1.3 | hypothetical protein (NCBI) | compare |
| b0688 | pgm | +0.5 | 2.4 | phosphoglucomutase (NCBI) | compare |
| b2829 | ptsP | +0.5 | 4.3 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b3119 | tdcR | +0.5 | 1.2 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b2528 | iscA | +0.5 | 1.3 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3998 | nfi | +0.5 | 3.2 | endonuclease V (deoxyinosine 3'endoduclease) (VIMSS) | compare |
| b0246 | yafW | +0.5 | 2.7 | CP4-6 prophage; antitoxin of the YkfI-YafW toxin-antitoxin system (NCBI) | compare |
| b1013 | ycdC | +0.5 | 1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2684 | mprA | +0.5 | 2.9 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b1542 | ydfI | +0.5 | 1.5 | predicted mannonate dehydrogenase (NCBI) | compare |
| b1109 | ndh | +0.5 | 2.6 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b1575 | dicB | +0.5 | 1.1 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b0216 | aspV | +0.5 | 2.4 | tRNA-Asp (NCBI) | compare |
| b2688 | gshA | +0.5 | 3.7 | glutamate--cysteine ligase (NCBI) | compare |
| b1090 | plsX | +0.5 | 2.2 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b2741 | rpoS | +0.5 | 2.3 | RNA polymerase sigma factor (NCBI) | compare |
| b2579 | yfiD | +0.5 | 1.9 | pyruvate formate lyase subunit (NCBI) | compare |
| b0949 | uup | +0.5 | 2.2 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4397 | creA | +0.5 | 2.3 | hypothetical protein (NCBI) | compare |
| b1804 | rnd | +0.5 | 2.9 | ribonuclease D (NCBI) | compare |
| b1085 | b1085 | +0.5 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2141 | yohJ | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b3780 | rhlB | +0.4 | 3.8 | ATP-dependent RNA helicase (NCBI) | compare |
| b0296 | ykgM | +0.4 | 1.2 | 50S ribosomal protein L31 (NCBI) | compare |
| b0147 | yadP | +0.4 | 2.9 | orf, hypothetical protein (VIMSS) | compare |
| b0912 | ihfB | +0.4 | 1.5 | integration host factor subunit beta (NCBI) | compare |
| b2910 | zapA | +0.4 | 2.0 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1518 | lsrG | +0.4 | 0.9 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b4606 | ypfM | +0.4 | 1.8 | hypothetical protein (RefSeq) | compare |
| b1539 | ydfG | +0.4 | 2.0 | L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b1103 | ycfF | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1758 | b1758 | +0.4 | 0.8 | putative cytochrome oxidase (VIMSS) | compare |
| b1842 | holE | +0.4 | 1.1 | DNA polymerase III, theta subunit (NCBI) | compare |
| b4609 | ryfD | +0.4 | 1.6 | Novel sRNA, function unknown (RefSeq) | compare |
| b1412 | azoR | +0.4 | 1.6 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b0461 | ybaJ | +0.4 | 2.6 | hypothetical protein (NCBI) | compare |
| b2947 | gshB | +0.4 | 1.8 | glutathione synthetase (NCBI) | compare |
| b1144 | ymfJ | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0746 | valZ | +0.4 | 1.3 | tRNA-Val (NCBI) | compare |
| b3787 | rffD | +0.4 | 2.9 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3555 | yiaG | +0.4 | 2.0 | predicted transcriptional regulator (NCBI) | compare |
| b0605 | ahpC | +0.4 | 1.5 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b2912 | ygfA | +0.4 | 1.3 | putative ligase (VIMSS) | compare |
| b2175 | spr | +0.4 | 1.5 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1190 | dadX | +0.4 | 1.9 | alanine racemase (NCBI) | compare |
| b1651 | gloA | +0.4 | 1.6 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b2824 | ygdB | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3644 | yicC | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b1936 | intG | +0.4 | 0.4 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3858 | yihD | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b1531 | marA | +0.4 | 1.0 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b1296 | ycjJ | +0.4 | 1.9 | putative amino acid/amine transport protein (VIMSS) | compare |
| b4460 | araH | +0.4 | 0.7 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1290 | sapF | +0.4 | 0.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1802 | yeaW | +0.4 | 1.7 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b1567 | intK | +0.4 | 1.2 | Qin prophage; predicted protein (RefSeq) | compare |
| b4445 | omrB | +0.4 | 1.9 | sRNA down regulates OM proteins; positively regulated by OmpR/EnvZ; binds Hfq (RefSeq) | compare |
| b4135 | yjdC | +0.4 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3670 | ilvN | +0.4 | 2.4 | acetolactate synthase small subunit (NCBI) | compare |
| b3786 | rffE | +0.4 | 3.1 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1732 | katE | +0.4 | 2.5 | hydroperoxidase HPII(III) (catalase) (NCBI) | compare |
| b4391 | yjjK | +0.4 | 2.9 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1380 | ldhA | +0.4 | 0.9 | D-lactate dehydrogenase (NCBI) | compare |
| b0234 | yafP | +0.4 | 1.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4255 | yjgD | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b2248 | yfaX | +0.4 | 1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1073 | flgB | +0.4 | 1.6 | flagellar basal-body rod protein B (NCBI) | compare |
| b3706 | trmE | +0.4 | 1.3 | tRNA modification GTPase (NCBI) | compare |
| b3842 | rfaH | +0.4 | 2.2 | transcriptional activator RfaH (NCBI) | compare |
| b2159 | nfo | +0.4 | 2.0 | endonuclease IV (NCBI) | compare |
| b4675 | yoaJ | +0.4 | 1.2 | expressed protein (RefSeq) | compare |
| b4595 | yciY | +0.4 | 0.8 | hypothetical protein (RefSeq) | compare |
| b2778 | ygcG | +0.4 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1370 | insH-5 | +0.4 | 0.9 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b4152 | frdC | +0.4 | 2.2 | fumarate reductase subunit C (NCBI) | compare |
| b1488 | ddpX | +0.4 | 1.6 | D-ala-D-ala dipeptidase, Zn-dependent (NCBI) | compare |
| b3761 | trpT | +0.4 | 0.8 | tRNA-Trp (NCBI) | compare |
| b1138 | ymfE | +0.4 | 0.7 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b3199 | yrbK | +0.4 | 0.6 | hypothetical protein (NCBI) | compare |
| b4453 | ldrD | +0.4 | 1.2 | toxic polypeptide, small (NCBI) | compare |
| b3794 | rffM | +0.4 | 2.6 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1593 | b1593 | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1088 | yceD | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1725 | yniA | +0.4 | 1.6 | predicted phosphotransferase/kinase (NCBI) | compare |
| b4224 | chpS | +0.4 | 1.7 | suppressor of inhibitory function of ChpB, PemI-like, autoregulated (VIMSS) | compare |
| b1821 | b1821 | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1883 | cheB | +0.4 | 2.4 | chemotaxis-specific methylesterase (NCBI) | compare |
| b2217 | rcsB | +0.4 | 2.3 | DNA-binding response regulator in two-component regulatory system with RcsC and YojN (NCBI) | compare |
| b3394 | yrfC | +0.4 | 2.4 | predicted fimbrial assembly protein (NCBI) | compare |
| b1357 | ydaS | +0.4 | 1.1 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1831 | proQ | +0.4 | 1.5 | putative solute/DNA competence effector (NCBI) | compare |
| b1222 | narX | +0.4 | 1.8 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b4196 | ulaD | +0.4 | 2.1 | 3-keto-L-gulonate 6-phosphate decarboxylase (NCBI) | compare |
| b1827 | kdgR | +0.4 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1153 | ymfQ | +0.4 | 1.6 | e14 prophage; conserved protein (NCBI) | compare |
| b1960 | vsr | +0.4 | 1.8 | DNA mismatch endonuclease of very short patch repair (NCBI) | compare |
| b2786 | barA | +0.4 | 3.3 | hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) | compare |
| b0806 | ybiM | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0550 | rusA | +0.4 | 0.8 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b3052 | rfaE | +0.4 | 1.8 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0195 | yaeB | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b1305 | pspB | +0.3 | 1.2 | phage shock protein B (NCBI) | compare |
| b2125 | yehT | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1724 | ydiZ | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b1760 | ynjH | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b3229 | sspA | +0.3 | 1.2 | stringent starvation protein A (NCBI) | compare |
| b0101 | yacG | +0.3 | 1.1 | zinc-binding protein (NCBI) | compare |
| b0227 | yafL | +0.3 | 1.4 | predicted lipoprotein and C40 family peptidase (NCBI) | compare |
| b2071 | yegJ | +0.3 | 0.7 | hypothetical protein (NCBI) | compare |
| b0503 | ybbB | +0.3 | 1.3 | tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI) | compare |
| b3740 | gidB | +0.3 | 2.7 | glucose-inhibited division protein B (NCBI) | compare |
| b2183 | rsuA | +0.3 | 1.2 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b1147 | ymfL | +0.3 | 1.5 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1590 | ynfH | +0.3 | 1.4 | oxidoreductase, membrane subunit (NCBI) | compare |
| b1329 | b1329 | +0.3 | 2.3 | putative transport periplasmic protein (VIMSS) | compare |
| b0897 | ycaC | +0.3 | 2.0 | predicted hydrolase (NCBI) | compare |
| b1400 | paaY | +0.3 | 1.2 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b4533 | ynfO | +0.3 | 1.2 | Qin prophage; predicted protein (NCBI) | compare |
| b2212 | alkB | +0.3 | 2.2 | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) | compare |
| b3790 | rffC | +0.3 | 1.7 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3141 | agaI | +0.3 | 2.3 | galactosamine-6-phosphate isomerase (NCBI) | compare |
| b0167 | glnD | +0.3 | 1.3 | PII uridylyl-transferase (NCBI) | compare |
| b1916 | sdiA | +0.3 | 2.4 | DNA-binding transcriptional activator (NCBI) | compare |
| b0830 | yliB | +0.3 | 2.4 | predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b1066 | rimJ | +0.3 | 1.6 | ribosomal-protein-S5-alanine N-acetyltransferase (NCBI) | compare |
| b2555 | yfhG | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b0706 | ybfD | +0.3 | 0.9 | hypothetical protein (NCBI) | compare |
| b0852 | rimK | +0.3 | 1.7 | ribosomal protein S6 modification protein (NCBI) | compare |
| b0158 | btuF | +0.3 | 1.4 | vitamin B12-transporter protein BtuF (NCBI) | compare |
| b1141 | ymfG | +0.3 | 1.7 | e14 prophage; predicted excisionase (NCBI) | compare |
| b0617 | citD | +0.3 | 1.0 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b1632 | rsxE | +0.3 | 2.3 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b2906 | visC | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b2510 | b2510 | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0121 | speE | +0.3 | 1.9 | spermidine synthase (NCBI) | compare |
| b3210 | arcB | +0.3 | 2.0 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b0677 | nagA | +0.3 | 1.6 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1197 | treA | +0.3 | 2.1 | periplasmic trehalase (NCBI) | compare |
| b1729 | ydjN | +0.3 | 1.9 | predicted transporter (NCBI) | compare |
| b2543 | yphA | +0.3 | 1.5 | predicted inner membrane protein (RefSeq) | compare |
| b0903 | pflB | +0.3 | 2.7 | pyruvate formate lyase I (NCBI) | compare |
| b1606 | folM | +0.3 | 1.6 | short chain dehydrogenase (NCBI) | compare |
| b1188 | ycgB | +0.3 | 1.8 | ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b1587 | ynfE | +0.3 | 1.9 | oxidoreductase subunit (NCBI) | compare |
| b2572 | rseA | +0.3 | 1.8 | anti-sigma factor (NCBI) | compare |
| b3871 | bipA | +0.3 | 2.5 | GTP-binding protein (NCBI) | compare |
| b0542 | renD | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2570 | rseC | +0.3 | 1.5 | RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) | compare |
| b0196 | rcsF | +0.3 | 1.8 | predicted outer membrane protein, signal (NCBI) | compare |
| b1681 | sufD | +0.3 | 2.0 | component of SufBCD complex (NCBI) | compare |
| b1667 | ydhR | +0.3 | 0.7 | hypothetical protein (NCBI) | compare |