| | gene | name | fitness | t score | description | |
|---|
| b3261 | fis | +2.0 | 7.0 | DNA-binding protein Fis (NCBI) | compare |
| b3643 | rph | +1.4 | 3.6 | ribonuclease PH (NCBI) | compare |
| b1575 | dicB | +1.2 | 2.3 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b2642 | yfjW | +1.1 | 2.1 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1278 | pgpB | +1.1 | 3.3 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b2912 | ygfA | +1.0 | 3.5 | putative ligase (VIMSS) | compare |
| b0746 | valZ | +1.0 | 3.3 | tRNA-Val (NCBI) | compare |
| b4048 | yjbM | +0.9 | 2.1 | hypothetical protein (NCBI) | compare |
| b0059 | hepA | +0.9 | 8.2 | ATP-dependent helicase HepA (NCBI) | compare |
| b3863 | polA | +0.9 | 1.1 | DNA polymerase I (NCBI) | compare |
| b3977 | tyrU | +0.9 | 1.4 | tRNA-Tyr (NCBI) | compare |
| b2071 | yegJ | +0.9 | 2.5 | hypothetical protein (NCBI) | compare |
| b2297 | pta | +0.9 | 1.4 | phosphate acetyltransferase (NCBI) | compare |
| b1085 | b1085 | +0.9 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3761 | trpT | +0.9 | 2.2 | tRNA-Trp (NCBI) | compare |
| b1567 | intK | +0.8 | 2.8 | Qin prophage; predicted protein (RefSeq) | compare |
| b3387 | dam | +0.8 | 6.7 | DNA adenine methylase (NCBI) | compare |
| b4603 | rseX | +0.8 | 0.9 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b3341 | rpsG | +0.8 | 1.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b1493 | gadB | +0.7 | 1.1 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b4000 | hupA | +0.7 | 4.6 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3027 | ygiZ | +0.7 | 0.6 | conserved inner membrane protein (NCBI) | compare |
| b4522 | yciX_1 | +0.7 | 2.1 | hypothetical protein (NCBI) | compare |
| b3500 | gor | +0.7 | 1.4 | glutathione reductase (NCBI) | compare |
| b1412 | azoR | +0.6 | 3.0 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b2808 | gcvA | +0.6 | 3.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2136 | yohD | +0.6 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0389 | yaiA | +0.6 | 2.2 | hypothetical protein (NCBI) | compare |
| b1302 | puuE | +0.6 | 2.5 | GABA aminotransferase, PLP-dependent (NCBI) | compare |
| b3790 | rffC | +0.6 | 2.7 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2597 | yfiA | +0.6 | 1.8 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b0131 | panD | +0.6 | 2.5 | aspartate 1-decarboxylase precursor (NCBI) | compare |
| b2904 | gcvH | +0.6 | 2.6 | glycine cleavage system protein H (NCBI) | compare |
| b1524 | yneH | +0.6 | 0.9 | predicted glutaminase (NCBI) | compare |
| b2259 | pmrD | +0.6 | 1.2 | polymyxin resistance protein B (VIMSS) | compare |
| b3181 | greA | +0.6 | 2.9 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b1259 | yciG | +0.6 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2198 | ccmD | +0.6 | 1.9 | cytochrome c biogenesis protein (NCBI) | compare |
| b1332 | ynaJ | +0.5 | 0.5 | predicted inner membrane protein (NCBI) | compare |
| b2684 | mprA | +0.5 | 1.9 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b0661 | miaB | +0.5 | 3.9 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b1977 | asnT | +0.5 | 1.7 | tRNA-Asn (NCBI) | compare |
| b1642 | slyA | +0.5 | 1.4 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b2939 | yqgB | +0.5 | 1.5 | predicted protein (RefSeq) | compare |
| b4702 | mgtL | +0.5 | 1.5 | regulatory leader peptide for mgtA (NCBI) | compare |
| b4451 | ryhB | +0.5 | 1.1 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b4699 | fnrS | +0.5 | 0.7 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b3644 | yicC | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b3180 | yhbY | +0.5 | 3.6 | predicted RNA-binding protein (NCBI) | compare |
| b1961 | dcm | +0.5 | 1.1 | DNA cytosine methylase (NCBI) | compare |
| b0542 | renD | +0.5 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1724 | ydiZ | +0.5 | 1.2 | hypothetical protein (NCBI) | compare |
| b1298 | ycjL | +0.5 | 2.5 | probable amidotransferase subunit (VIMSS) | compare |
| b1138 | ymfE | +0.5 | 1.1 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1429 | tehA | +0.5 | 0.9 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1355 | b1355 | +0.5 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b0101 | yacG | +0.5 | 2.2 | zinc-binding protein (NCBI) | compare |
| b2300 | yfcE | +0.5 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2910 | zapA | +0.5 | 2.6 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1593 | b1593 | +0.5 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4692 | oweE | +0.5 | 2.0 | no description | compare |
| b1305 | pspB | +0.5 | 1.2 | phage shock protein B (NCBI) | compare |
| b4592 | yccB | +0.5 | 1.4 | hypothetical protein (RefSeq) | compare |
| b1336 | ydaH | +0.5 | 2.4 | putative pump protein (transport) (VIMSS) | compare |
| b4407 | thiS | +0.5 | 1.2 | sulfur carrier protein ThiS (NCBI) | compare |
| b2903 | gcvP | +0.5 | 4.2 | glycine dehydrogenase (NCBI) | compare |
| b4370 | leuQ | +0.5 | 1.4 | tRNA-Leu (NCBI) | compare |
| b1790 | yeaM | +0.5 | 1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2156 | lysP | +0.5 | 3.8 | lysine transporter (NCBI) | compare |
| b0251 | yafY | +0.5 | 2.6 | CP4-6 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2905 | gcvT | +0.5 | 3.1 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b1300 | puuC | +0.5 | 2.8 | gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent (NCBI) | compare |
| b3260 | dusB | +0.5 | 1.4 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b2248 | yfaX | +0.5 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1088 | yceD | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b3545 | proK | +0.4 | 1.0 | tRNA-Pro (NCBI) | compare |
| b4458 | oxyS | +0.4 | 0.7 | global regulatory RNA (NCBI) | compare |
| b1160 | elbA | +0.4 | 0.7 | hypothetical protein (NCBI) | compare |
| b1920 | fliY | +0.4 | 1.7 | cystine transporter subunit (NCBI) | compare |
| b1222 | narX | +0.4 | 2.0 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b1486 | ddpB | +0.4 | 1.8 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b4695 | ykgT | +0.4 | 1.5 | no description | compare |
| b4685 | yrbN | +0.4 | 1.4 | expressed protein (RefSeq) | compare |
| b1847 | yebF | +0.4 | 0.7 | predicted protein (RefSeq) | compare |
| b0227 | yafL | +0.4 | 2.2 | predicted lipoprotein and C40 family peptidase (NCBI) | compare |
| b1334 | fnr | +0.4 | 1.5 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b1827 | kdgR | +0.4 | 1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1266 | yciV | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b1151 | ymfO | +0.4 | 1.6 | e14 prophage; conserved protein (RefSeq) | compare |
| b2688 | gshA | +0.4 | 2.9 | glutamate--cysteine ligase (NCBI) | compare |
| b1793 | yoaF | +0.4 | 1.8 | conserved outer membrane protein (NCBI) | compare |
| b3164 | pnp | +0.4 | 1.6 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4589 | ylcI | +0.4 | 1.5 | hypothetical protein (RefSeq) | compare |
| b0933 | ssuB | +0.4 | 2.2 | alkanesulfonate transporter subunit (NCBI) | compare |
| b2083 | yegZ | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1008 | ycdI | +0.4 | 2.5 | hypothetical protein (NCBI) | compare |
| b4373 | rimI | +0.4 | 1.7 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b1123 | potD | +0.4 | 1.6 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b0051 | ksgA | +0.4 | 2.0 | dimethyladenosine transferase (NCBI) | compare |
| b3149 | yraO | +0.4 | 2.8 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b1632 | rsxE | +0.4 | 2.8 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b2080 | b2080 | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4203 | rplI | +0.4 | 2.1 | 50S ribosomal protein L9 (NCBI) | compare |
| b1291 | sapD | +0.4 | 1.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0798 | ybiA | +0.4 | 0.7 | hypothetical protein (NCBI) | compare |
| b2990 | hybG | +0.4 | 0.7 | hydrogenase 2 accessory protein (NCBI) | compare |
| b2951 | yggS | +0.4 | 2.0 | predicted enzyme (NCBI) | compare |
| b3670 | ilvN | +0.4 | 2.7 | acetolactate synthase small subunit (NCBI) | compare |
| b1861 | ruvA | +0.4 | 0.7 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2309 | hisJ | +0.4 | 2.0 | histidine/lysine/arginine/ornithine transporter subunit (NCBI) | compare |
| b1758 | b1758 | +0.4 | 0.7 | putative cytochrome oxidase (VIMSS) | compare |
| b0622 | crcA | +0.4 | 2.7 | palmitoyl transferase for Lipid A (NCBI) | compare |
| b1777 | b1777 | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4504 | ykfH | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b4397 | creA | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b2125 | yehT | +0.4 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4402 | yjjY | +0.4 | 0.6 | hypothetical protein (NCBI) | compare |
| b4594 | ymgJ | +0.4 | 1.2 | hypothetical protein (RefSeq) | compare |
| b4567 | yjjZ | +0.4 | 2.4 | hypothetical protein (NCBI) | compare |
| b2704 | srlB | +0.4 | 1.2 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4345 | mcrC | +0.4 | 0.7 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b1377 | ompN | +0.4 | 2.0 | outer membrane pore protein N, non-specific (NCBI) | compare |
| b1728 | ydjM | +0.4 | 1.6 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b1558 | cspF | +0.4 | 1.1 | Qin prophage; cold shock protein (NCBI) | compare |
| b1518 | lsrG | +0.4 | 1.0 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b2123 | yehR | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0685 | ybfE | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3786 | rffE | +0.4 | 3.1 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1195 | ymgE | +0.4 | 1.2 | predicted inner membrane protein (NCBI) | compare |
| b4650 | yibS | +0.4 | 1.2 | no description | compare |
| b0195 | yaeB | +0.4 | 2.0 | hypothetical protein (NCBI) | compare |
| b1804 | rnd | +0.4 | 1.8 | ribonuclease D (NCBI) | compare |
| b3107 | yhaL | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1763 | topB | +0.4 | 1.4 | DNA topoisomerase III (NCBI) | compare |
| b3153 | yhbO | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b4171 | miaA | +0.4 | 1.5 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b4570 | lomR | +0.4 | 1.1 | no description | compare |
| b0440 | hupB | +0.4 | 2.1 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b2572 | rseA | +0.3 | 2.4 | anti-sigma factor (NCBI) | compare |
| b2058 | wcaB | +0.3 | 0.6 | predicted acyl transferase (NCBI) | compare |
| b1598 | ydgD | +0.3 | 1.9 | predicted peptidase (NCBI) | compare |
| b1931 | yedK | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b1144 | ymfJ | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4461 | yfjD | +0.3 | 2.4 | predicted inner membrane protein (RefSeq) | compare |
| b1296 | ycjJ | +0.3 | 1.8 | putative amino acid/amine transport protein (VIMSS) | compare |
| b2953 | yggU | +0.3 | 0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1109 | ndh | +0.3 | 1.5 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b2457 | cchA | +0.3 | 2.1 | detox protein (VIMSS) | compare |
| b4391 | yjjK | +0.3 | 2.6 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1190 | dadX | +0.3 | 1.8 | alanine racemase (NCBI) | compare |
| b2532 | yfhQ | +0.3 | 2.1 | predicted methyltransferase (NCBI) | compare |
| b2435 | amiA | +0.3 | 1.3 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b1680 | sufS | +0.3 | 2.4 | selenocysteine lyase (NCBI) | compare |
| b1539 | ydfG | +0.3 | 1.6 | L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b4548 | ypjJ | +0.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b0912 | ihfB | +0.3 | 2.0 | integration host factor subunit beta (NCBI) | compare |
| b2575 | yfiC | +0.3 | 2.6 | putative enzyme (VIMSS) | compare |
| b1310 | ycjN | +0.3 | 1.7 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b1119 | nagK | +0.3 | 1.9 | N-acetyl-D-glucosamine kinase (NCBI) | compare |
| b0975 | hyaD | +0.3 | 1.5 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b0976 | hyaE | +0.3 | 2.0 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b2434 | b2434 | +0.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2634 | yfjR | +0.3 | 1.8 | CP4-57 prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3677 | yidI | +0.3 | 2.0 | predicted inner membrane protein (NCBI) | compare |
| b1888 | cheA | +0.3 | 1.8 | fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) | compare |
| b1339 | abgR | +0.3 | 2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2934 | cmtB | +0.3 | 0.4 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1583 | ynfB | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b2911 | ssrS | +0.3 | 0.9 | 6S regulatory RNA (NCBI) | compare |
| b2749 | ygbE | +0.3 | 2.1 | conserved inner membrane protein (NCBI) | compare |
| b0197 | metQ | +0.3 | 2.4 | DL-methionine transporter subunit (NCBI) | compare |
| b0326 | yahL | +0.3 | 0.9 | hypothetical protein (NCBI) | compare |
| b0479 | fsr | +0.3 | 2.2 | predicted fosmidomycin efflux system (NCBI) | compare |
| b1013 | ycdC | +0.3 | 1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4521 | ycgI | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b4503 | yafF | +0.3 | 0.3 | no description | compare |
| b1197 | treA | +0.3 | 2.3 | periplasmic trehalase (NCBI) | compare |
| b1282 | yciH | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4552 | yrhC | +0.3 | 0.4 | no description | compare |
| b0706 | ybfD | +0.3 | 0.9 | hypothetical protein (NCBI) | compare |
| b1120 | cobB | +0.3 | 1.4 | deacetylase of acs and cheY, regulates chemotaxis (NCBI) | compare |
| b2159 | nfo | +0.3 | 2.1 | endonuclease IV (NCBI) | compare |
| b1926 | fliT | +0.3 | 1.4 | predicted chaperone (NCBI) | compare |
| b4519 | icdC | +0.3 | 1.4 | no description | compare |
| b3740 | gidB | +0.3 | 2.5 | glucose-inhibited division protein B (NCBI) | compare |
| b2490 | b2490 | +0.3 | 1.2 | putative protein processing element (VIMSS) | compare |
| b4030 | yjbA | +0.3 | 1.7 | phosphate-starvation-inducible protein PsiE (NCBI) | compare |
| b0813 | rhtA | +0.3 | 2.2 | threonine and homoserine efflux system (NCBI) | compare |
| b4640 | yoeG | +0.3 | 0.9 | no description | compare |
| b4481 | rffT | +0.3 | 1.7 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3392 | yrfA | +0.3 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3337 | bfd | +0.3 | 1.7 | bacterioferritin-associated ferredoxin (NCBI) | compare |
| b4686 | yshB | +0.3 | 1.8 | expressed protein (RefSeq) | compare |
| b0401 | brnQ | +0.3 | 1.9 | predicted branched chain amino acid transporter (LIV-II) (NCBI) | compare |
| b0605 | ahpC | +0.3 | 1.3 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b2169 | fruB | +0.3 | 1.5 | fused fructose-specific PTS enzymes: IIA component/HPr component (NCBI) | compare |
| b4435 | isrC | +0.3 | 0.9 | unknown RNA (NCBI) | compare |
| b2643 | yfjX | +0.3 | 1.8 | CP4-57 prophage; predicted antirestriction protein (NCBI) | compare |
| b4363 | yjjB | +0.3 | 1.3 | conserved inner membrane protein (RefSeq) | compare |
| b3443 | yrhA | +0.3 | 0.5 | orf, hypothetical protein (VIMSS) | compare |