Experiment set30IT060 for Pseudomonas putida KT2440

Compare to:

Acanthamoeba sp., muxed culture-2

Genes with specific phenotypes:

  gene name fitness t score description  
PP_5055 -4.6 -5.7 Sulfurtransferase compare
PP_4401 -3.4 -8.0 branched-chain alpha-keto acid dehydrogenase complex, alpha subunit compare
PP_1206 -2.8 -10.2 basic-amino-acid specific porin OprD compare
PP_1669 -2.7 -5.2 NLP/P60 family protein compare
PP_0326 -2.5 -6.3 sarcosine oxidase subunit gamma compare
PP_4403 -2.3 -7.0 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex compare
PP_0312 -2.3 -5.2 electron transfer flavoprotein, alpha subunit compare
PP_0310 -2.2 -8.2 putative dimethylglycine dehydrogenase subunit compare
PP_4050 -2.0 -9.8 glycogen synthase compare
PP_0058 -1.9 -6.4 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PP_2178 -1.8 -6.5 glutamate-putrescine ligase compare
PP_0111 -1.8 -6.4 Electron transport protein SCO1/SenC compare
PP_2660 -1.7 -5.9 conserved protein of unknown function compare
PP_4402 -1.7 -6.4 branched-chain alpha-keto acid dehydrogenase complex, beta subunit compare
PP_1460 -1.6 -6.7 putative Membrane protein compare
PP_5005 -1.5 -6.1 Poly(3-hydroxyalkanoate) polymerase 2 compare
PP_4006 -1.4 -5.1 Putative arginyl-tRNA--protein transferase compare
PP_5257 -1.3 -5.5 L-pipecolate oxidase compare
PP_5180 +1.1 5.6 spermidine/putrescine ABC transporter - periplasmic subunit compare
PP_5024 +1.2 6.9 Amino acid ABC transporter, periplasmic amino acid-binding protein compare
PP_5161 +1.3 6.2 putative lysophospholipase compare
PP_5023 +1.3 5.8 Amino acid ABC transporter, permease protein compare
PP_1842 +1.3 6.8 Glutamine amidotransferase, class I compare
PP_0841 +1.4 6.2 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR compare
PP_5177 +1.5 8.2 spermidine/putrescine ABC transporter - permease subunit compare
PP_3246 +1.7 7.9 Beta-carotene hydroxylase compare
PP_2884 +1.7 10.7 XRE family transcriptional regulator compare
PP_5179 +1.8 8.4 spermidine/putrescine ABC transporter - ATP binding subunit compare
PP_5181 +2.0 14.1 spermidine/putrescine ABC transporter - periplasmic subunit compare
PP_5178 +2.0 14.0 spermidine/putrescine ABC transporter - inner membrane subunit compare
PP_5218 +2.1 9.2 DedA family protein compare
PP_4486 +2.2 15.1 lysine / arginine / ornithine ABC transporter - periplasmic binding protein compare
PP_4485 +2.4 16.0 histidine / lysine / arginine / ornithine ABC transporter - permease subunit compare
PP_4483 +2.4 16.4 histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit compare
PP_4484 +2.4 18.5 histidine / lysine / arginine / ornithine ABC transporter - permease subunit compare
PP_3731 +2.5 16.5 Transcriptional regulator, TetR family compare


Specific phenotypes for micoeukaryotes Pelleted after growth overnight in LB+Kan50 across organisms