Experiment set30IT057 for Pseudomonas putida KT2440

Compare to:

C.elegans, mixed culture-1

Genes with specific phenotypes:

  gene name fitness t score description  
PP_4260 -3.7 -6.2 conserved protein of unknown function compare
PP_5139 -3.6 -8.1 cadmium translocating P-type ATPase conserved
PP_5055 -3.5 -6.5 Sulfurtransferase compare
PP_1206 -2.6 -7.6 basic-amino-acid specific porin OprD compare
PP_4050 -2.5 -13.9 glycogen synthase compare
PP_0111 -2.5 -8.2 Electron transport protein SCO1/SenC compare
PP_4619 -2.4 -6.6 Maleylacetoacetate isomerase compare
PP_4259 -2.2 -7.9 Iron-sulfur cluster-binding protein compare
PP_4006 -2.1 -9.1 Putative arginyl-tRNA--protein transferase compare
PP_5283 -2.0 -7.0 periplasmic dipeptide transport protein compare
PP_1669 -1.9 -5.1 NLP/P60 family protein compare
PP_3819 -1.9 -6.7 glutathione reductase (NADPH) compare
PP_0697 -1.9 -7.6 ribosomal-protein-S18-alanine N-acetyltransferase compare
PP_1408 -1.8 -7.6 (R)-3-hydroxydecanoyl-ACP:CoA transacylase compare
PP_1460 -1.8 -8.4 putative Membrane protein compare
PP_5257 -1.7 -8.5 L-pipecolate oxidase compare
PP_5003 -1.7 -6.0 poly(3-hydroxyalkanoate) polymerase 1 compare
PP_2660 -1.6 -7.5 conserved protein of unknown function compare
PP_3596 -1.6 -5.2 D-lysine oxidase compare
PP_0058 -1.6 -6.6 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PP_5258 -1.5 -5.7 L-piperidine-6-carboxylate dehydrogenase compare
PP_0311 -1.5 -5.9 putative dimethylglycine dehydrogenase subunit compare
PP_4478 -1.5 -5.7 N-succinylglutamate 5-semialdehyde dehydrogenase compare
PP_5005 -1.4 -6.5 Poly(3-hydroxyalkanoate) polymerase 2 compare
PP_4667 -1.3 -5.3 methylmalonate-semialdehyde dehydrogenase compare
PP_4900 -1.3 -5.9 epoxyqueuosine reductase compare
PP_2223 -1.3 -6.3 conserved protein of unknown function compare
PP_0129 -1.3 -7.9 GGDEF domain protein compare
PP_0310 -1.2 -6.4 putative dimethylglycine dehydrogenase subunit compare
PP_0908 -1.2 -5.0 conserved exported protein of unknown function compare
PP_3456 -1.2 -5.6 Multidrug resistance protein MexB compare
PP_1641 -1.1 -5.4 tRNA 2-thiocytidine biosynthesis protein TtcA compare
PP_5077 -1.1 -5.0 conserved protein of unknown function compare
PP_5024 +1.0 6.1 Amino acid ABC transporter, periplasmic amino acid-binding protein compare
PP_5181 +1.2 9.5 spermidine/putrescine ABC transporter - periplasmic subunit compare
PP_5023 +1.4 8.4 Amino acid ABC transporter, permease protein compare
PP_0841 +1.5 8.9 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR compare
PP_3246 +1.5 7.1 Beta-carotene hydroxylase compare
PP_5161 +1.5 10.1 putative lysophospholipase compare
PP_5320 +1.8 10.7 two-component system DNA-binding transcriptional dual response regulator PhoB conserved
PP_2181 +1.8 8.3 Transcriptional regulator, Cro/CI family compare
PP_5321 +1.9 9.7 two-component system sensory histidine kinase conserved
PP_4483 +2.0 14.1 histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit compare
PP_5218 +2.0 11.6 DedA family protein compare
PP_2884 +2.0 8.7 XRE family transcriptional regulator compare
PP_4485 +2.1 14.7 histidine / lysine / arginine / ornithine ABC transporter - permease subunit compare
PP_4486 +2.2 14.1 lysine / arginine / ornithine ABC transporter - periplasmic binding protein compare
PP_3731 +2.3 17.0 Transcriptional regulator, TetR family compare
PP_4484 +2.4 19.5 histidine / lysine / arginine / ornithine ABC transporter - permease subunit compare


Specific phenotypes for micoeukaryotes Pelleted after growth overnight in LB+Kan50 across organisms