Experiment set30IT056 for Pseudomonas putida KT2440

Compare to:

Dictyostellum sp.mixed culture-2

Genes with specific phenotypes:

  gene name fitness t score description  
PP_0697 -2.3 -5.8 ribosomal-protein-S18-alanine N-acetyltransferase compare
PP_1206 -2.1 -7.8 basic-amino-acid specific porin OprD compare
PP_5283 -1.6 -6.7 periplasmic dipeptide transport protein compare
PP_0111 -1.5 -5.3 Electron transport protein SCO1/SenC compare
PP_1460 -1.5 -7.4 putative Membrane protein compare
PP_4667 -1.4 -6.0 methylmalonate-semialdehyde dehydrogenase compare
PP_2660 -1.3 -6.8 conserved protein of unknown function compare
PP_4050 -1.3 -8.3 glycogen synthase compare
PP_5257 -1.1 -5.6 L-pipecolate oxidase compare
PP_5023 +1.2 6.4 Amino acid ABC transporter, permease protein compare
PP_3246 +1.2 6.5 Beta-carotene hydroxylase compare
PP_5181 +1.2 8.5 spermidine/putrescine ABC transporter - periplasmic subunit compare
PP_5024 +1.3 7.0 Amino acid ABC transporter, periplasmic amino acid-binding protein compare
PP_5179 +1.3 8.1 spermidine/putrescine ABC transporter - ATP binding subunit compare
PP_5178 +1.5 8.7 spermidine/putrescine ABC transporter - inner membrane subunit compare
PP_5161 +1.5 9.4 putative lysophospholipase compare
PP_2181 +1.7 9.2 Transcriptional regulator, Cro/CI family compare
PP_5218 +1.9 8.7 DedA family protein compare
PP_4483 +2.0 14.2 histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit compare
PP_5320 +2.0 10.1 two-component system DNA-binding transcriptional dual response regulator PhoB conserved
PP_5321 +2.0 11.7 two-component system sensory histidine kinase conserved
PP_2884 +2.1 11.0 XRE family transcriptional regulator compare
PP_4485 +2.1 14.0 histidine / lysine / arginine / ornithine ABC transporter - permease subunit compare
PP_4486 +2.3 14.9 lysine / arginine / ornithine ABC transporter - periplasmic binding protein compare
PP_4484 +2.4 19.4 histidine / lysine / arginine / ornithine ABC transporter - permease subunit compare
PP_3731 +2.9 23.7 Transcriptional regulator, TetR family compare


Specific phenotypes for micoeukaryotes Pelleted after growth overnight in LB+Kan50 across organisms