Experiment set2TCH572 for Dickeya dianthicola ME23
Stem-Upstate
Group: plantMedia: Potato stem + cv.Upstate
Culturing: DdiaME23, Potato stem
By: Juliana Gonzalez-Tobon on 9/3/21
Specific Phenotypes
For 3 genes in this experiment
For plant cv.Upstate in Dickeya dianthicola ME23
For plant cv.Upstate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Experimental tye | 1 |
| Heme and Siroheme Biosynthesis | 1 |
| Type III secretion system orphans | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| heme b biosynthesis II (oxygen-independent) | 4 | 4 | 1 |
| superpathway of heme b biosynthesis from uroporphyrinogen-III | 6 | 6 | 1 |
| 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic) | 9 | 3 | 1 |
| superpathway of bacteriochlorophyll a biosynthesis | 26 | 6 | 1 |