Experiment set2S86 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-4

200 most important genes:

  gene name fitness t score description  
OLJFJH_17720 -6.6 -6.6 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_06120 -5.4 -4.3 acetylglutamate kinase compare
OLJFJH_06785 -4.9 -17.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_01395 -4.9 -16.4 carbamoyl-phosphate synthase large subunit compare
OLJFJH_11280 -4.4 -13.2 amidophosphoribosyltransferase compare
OLJFJH_17635 -4.4 -10.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_01400 -4.3 -15.1 carbamoyl phosphate synthase small subunit compare
OLJFJH_10500 -4.0 -2.8 IMP dehydrogenase compare
OLJFJH_06780 -4.0 -16.5 phosphoribosylamine--glycine ligase compare
OLJFJH_10305 -3.9 -16.6 phosphoribosylformylglycinamidine synthase compare
OLJFJH_01595 -3.8 -6.9 phosphoserine phosphatase compare
OLJFJH_10590 -3.8 -9.1 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_05510 -3.7 -3.6 ribosome-dependent GTPase TypA compare
OLJFJH_06115 -3.7 -15.8 acetylornithine deacetylase compare
OLJFJH_06130 -3.7 -19.9 argininosuccinate lyase compare
OLJFJH_09115 -3.7 -12.9 amino-acid N-acetyltransferase compare
OLJFJH_12160 -3.6 -0.9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_06125 -3.6 -14.1 argininosuccinate synthase compare
OLJFJH_08880 -3.4 -10.8 diaminopimelate decarboxylase compare
OLJFJH_15175 -3.3 -15.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
OLJFJH_12170 -3.3 -9.5 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
OLJFJH_10215 -3.3 -9.4 RNA polymerase sigma factor RpoE compare
OLJFJH_10645 -3.3 -4.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_07335 -3.3 -18.2 ornithine carbamoyltransferase compare
OLJFJH_13570 -3.2 -7.9 orotidine-5'-phosphate decarboxylase compare
OLJFJH_09310 -3.1 -9.2 phosphoadenylyl-sulfate reductase compare
OLJFJH_16980 -3.0 -16.7 citrate synthase compare
OLJFJH_05615 -3.0 -2.2 Conserved uncharacterized protein compare
OLJFJH_17630 -2.9 -0.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_02410 -2.9 -7.5 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_12165 -2.9 -6.1 imidazole glycerol phosphate synthase subunit HisH compare
OLJFJH_12155 -2.9 -6.2 imidazole glycerol phosphate synthase subunit HisF compare
OLJFJH_12180 -2.9 -15.6 histidinol dehydrogenase compare
OLJFJH_05470 -2.9 -1.4 DNA polymerase I compare
OLJFJH_16950 -2.9 -2.8 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_12175 -2.9 -11.9 histidinol-phosphate transaminase compare
OLJFJH_09305 -2.8 -11.5 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
OLJFJH_01490 -2.8 -11.8 homoserine kinase compare
OLJFJH_07675 -2.8 -12.3 outer membrane channel protein TolC compare
OLJFJH_04030 -2.7 -12.2 bifunctional succinylornithine transaminase/acetylornithine transaminase compare
OLJFJH_17650 -2.7 -0.7 ABC transporter ATP-binding protein compare
OLJFJH_08735 -2.7 -9.9 phosphoglycerate dehydrogenase compare
OLJFJH_06480 -2.7 -17.4 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
OLJFJH_00595 -2.7 -5.2 sigma E protease regulator RseP compare
OLJFJH_06105 -2.7 -15.5 methylenetetrahydrofolate reductase compare
OLJFJH_01370 -2.6 -2.6 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_15670 -2.6 -5.6 dihydroorotase compare
OLJFJH_15115 -2.6 -1.5 YgdI/YgdR family lipoprotein compare
OLJFJH_13470 -2.5 -9.4 tryptophan synthase subunit alpha compare
OLJFJH_06985 -2.5 -13.6 outer membrane-stress sensor serine endopeptidase DegS compare
OLJFJH_05105 -2.5 -7.8 glyoxylate/hydroxypyruvate reductase GhrB compare
OLJFJH_12150 -2.5 -4.9 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
OLJFJH_05495 -2.5 -10.5 nitrogen regulation protein NR(I) compare
OLJFJH_06475 -2.4 -7.1 HTH-type transcriptional regulator MetR compare
OLJFJH_03580 -2.4 -0.9 transcriptional repressor LexA compare
OLJFJH_01485 -2.4 -8.4 threonine synthase compare
OLJFJH_07070 -2.4 -7.4 RNA polymerase factor sigma-54 compare
OLJFJH_12040 -2.4 -6.9 Amylovoran biosynthesis glycosyltransferase AmsB compare
OLJFJH_05770 -2.4 -3.6 orotate phosphoribosyltransferase compare
OLJFJH_06995 -2.4 -2.8 Z-ring associated protein ZapG compare
OLJFJH_07830 -2.3 -3.3 TonB system transport protein ExbD compare
OLJFJH_07330 -2.3 -7.5 aspartate carbamoyltransferase compare
OLJFJH_17775 -2.3 -10.8 EamA-like transporter family compare
OLJFJH_13475 -2.3 -13.4 tryptophan synthase subunit beta compare
OLJFJH_15990 -2.3 -7.7 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_12185 -2.3 -10.5 ATP phosphoribosyltransferase compare
OLJFJH_13480 -2.3 -6.8 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
OLJFJH_12670 -2.3 -10.2 flippase compare
OLJFJH_16180 -2.2 -7.7 cell division protein FtsK compare
OLJFJH_08795 -2.2 -11.9 hydrolase compare
OLJFJH_12070 -2.2 -9.3 Amylovoran biosynthesis glycosyltransferase AmsK compare
OLJFJH_16185 -2.2 -1.6 leucine-responsive transcriptional regulator Lrp compare
OLJFJH_09300 -2.2 -9.3 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
OLJFJH_10865 -2.2 -1.1 cysteine synthase A compare
OLJFJH_13510 -2.2 -5.8 23S rRNA pseudouridine(2605) synthase RluB compare
OLJFJH_15555 -2.1 -1.6 23S rRNA accumulation protein YceD compare
OLJFJH_16965 -2.1 -3.7 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_03450 -2.1 -4.2 aromatic amino acid aminotransferase compare
OLJFJH_05565 -2.1 -1.1 DNA-directed RNA polymerase subunit omega compare
OLJFJH_09725 -2.1 -6.9 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
OLJFJH_05465 -2.1 -4.9 thiol:disulfide interchange protein DsbA compare
OLJFJH_00745 -2.1 -11.9 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_05180 -2.0 -0.8 membrane protein insertion efficiency factor YidD compare
OLJFJH_09335 -2.0 -7.5 Adenylyl-sulfate kinase compare
OLJFJH_08570 -2.0 -6.4 glutathione synthase compare
OLJFJH_13355 -2.0 -7.5 4-oxalmesaconate hydratase compare
OLJFJH_07825 -2.0 -5.6 tol-pal system-associated acyl-CoA thioesterase compare
OLJFJH_06525 -2.0 -2.6 Sec-independent protein translocase subunit TatC compare
OLJFJH_05920 -1.9 -5.0 serine O-acetyltransferase compare
OLJFJH_12885 -1.9 -5.4 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_06225 -1.9 -11.1 branched-chain-amino-acid transaminase compare
OLJFJH_03710 -1.8 -0.5 peptide deformylase compare
OLJFJH_17850 -1.8 -11.7 efflux transporter periplasmic adaptor subunit compare
OLJFJH_04305 -1.8 -0.7 DUF2756 domain-containing protein compare
OLJFJH_16780 -1.8 -3.6 6-phosphogluconolactonase compare
OLJFJH_03650 -1.8 -10.7 homoserine O-succinyltransferase compare
OLJFJH_02500 -1.8 -4.0 RNA chaperone Hfq compare
OLJFJH_13485 -1.8 -4.1 Anthranilate phosphoribosyltransferase compare
OLJFJH_10715 -1.8 -0.5 hypothetical protein compare
OLJFJH_07030 -1.7 -13.9 glutamate synthase large subunit compare
OLJFJH_12965 -1.7 -1.1 Lysine exporter LysO compare
OLJFJH_13530 -1.7 -2.2 HTH-type transcriptional regulator CysB compare
OLJFJH_07025 -1.7 -10.5 sulfite reductase subunit alpha compare
OLJFJH_17880 -1.7 -1.2 transcriptional regulator compare
OLJFJH_00700 -1.7 -1.8 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
OLJFJH_09625 -1.7 -7.1 glutamate--cysteine ligase compare
OLJFJH_10850 -1.7 -2.6 PTS glucose transporter subunit IIA compare
OLJFJH_00690 -1.7 -5.2 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
OLJFJH_18630 -1.7 -0.8 ribonuclease HI compare
OLJFJH_01295 -1.7 -10.2 3-isopropylmalate dehydratase large subunit compare
OLJFJH_15475 -1.7 -7.8 penicillin-binding protein activator LpoB compare
OLJFJH_13495 -1.7 -11.4 anthranilate synthase component 1 compare
OLJFJH_09320 -1.7 -8.4 siroheme synthase CysG compare
OLJFJH_16575 -1.7 -4.8 helix-turn-helix-type transcriptional regulator compare
OLJFJH_06095 -1.7 -8.2 cystathionine gamma-synthase compare
OLJFJH_07215 -1.7 -3.0 preprotein translocase subunit SecG compare
OLJFJH_09065 -1.7 -1.4 thymidylate synthase compare
OLJFJH_08875 -1.6 -6.3 LysR family transcriptional regulator compare
OLJFJH_01290 -1.6 -12.6 3-isopropylmalate dehydrogenase compare
OLJFJH_01380 -1.6 -4.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
OLJFJH_12075 -1.6 -9.7 Amylovoran biosynthesis protein AmsL compare
OLJFJH_14950 -1.6 -6.8 redox-regulated ATPase YchF compare
OLJFJH_03455 -1.6 -1.0 hypothetical protein compare
OLJFJH_06515 -1.5 -1.2 twin-arginine translocase subunit TatA compare
OLJFJH_04160 -1.5 -3.6 two-component system response regulator OmpR compare
OLJFJH_08400 -1.5 -1.4 hypothetical protein compare
OLJFJH_05630 -1.5 -1.2 sce7726 family protein compare
OLJFJH_05910 -1.5 -6.7 protein-export chaperone SecB compare
OLJFJH_07275 -1.5 -2.8 DEAD/DEAH family ATP-dependent RNA helicase compare
OLJFJH_03945 -1.5 -0.8 peptidylprolyl isomerase compare
OLJFJH_01730 -1.5 -1.3 hypothetical protein compare
OLJFJH_18015 -1.5 -3.7 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_18020 -1.5 -2.7 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_13440 -1.5 -1.3 TonB system transport protein TonB compare
OLJFJH_17340 -1.5 -1.8 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
OLJFJH_06415 -1.5 -4.6 tyrosine recombinase XerC compare
OLJFJH_15570 -1.5 -5.0 ribonuclease E compare
OLJFJH_12050 -1.4 -2.6 Amylovoran biosynthesis glycosyltransferase AmsD compare
OLJFJH_13350 -1.4 -3.5 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_09575 -1.4 -3.1 recombinase RecA compare
OLJFJH_11440 -1.4 -3.7 NADH-quinone oxidoreductase subunit NuoH compare
OLJFJH_01495 -1.4 -9.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
OLJFJH_10585 -1.4 -9.0 phosphoribosylglycinamide formyltransferase compare
OLJFJH_10200 -1.4 -5.1 ATP-dependent RNA helicase SrmB compare
OLJFJH_00775 -1.4 -5.4 polynucleotide adenylyltransferase PcnB compare
OLJFJH_09965 -1.4 -0.8 flagellar biosynthetic protein FliO compare
OLJFJH_03200 -1.4 -6.1 TonB-dependent siderophore receptor compare
OLJFJH_06260 -1.4 -4.8 exopolyphosphatase compare
OLJFJH_18095 -1.4 -3.2 transcriptional regulator NrdR compare
OLJFJH_05730 -1.4 -0.5 hypothetical protein compare
OLJFJH_00675 -1.4 -1.8 hypothetical protein compare
OLJFJH_07060 -1.3 -3.9 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_03260 -1.3 -6.8 translation factor (SUA5) compare
OLJFJH_03950 -1.3 -0.6 DUF2387 domain-containing protein compare
OLJFJH_02470 -1.3 -9.5 ribonuclease R compare
OLJFJH_11050 -1.3 -1.7 tRNA-Arg compare
OLJFJH_10245 -1.3 -3.0 translation elongation factor 4 compare
OLJFJH_15800 -1.3 -1.5 DUF2594 domain-containing protein compare
OLJFJH_11460 -1.3 -7.6 NADH-quinone oxidoreductase subunit L compare
OLJFJH_05040 -1.3 -8.8 aspartate aminotransferase family protein compare
OLJFJH_16040 -1.3 -5.3 Outer membrane porin OmpC/OmpF/PhoE compare
OLJFJH_03535 -1.3 -0.7 hypothetical protein compare
OLJFJH_17855 -1.3 -7.5 multidrug efflux RND transporter permease subunit AcrB compare
OLJFJH_18395 -1.3 -3.1 fluoride efflux transporter CrcB compare
OLJFJH_02090 -1.2 -5.3 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_11410 -1.2 -3.2 NADH-quinone oxidoreductase subunit NuoA compare
OLJFJH_01470 -1.2 -1.7 molybdopterin adenylyltransferase compare
OLJFJH_13365 -1.2 -2.0 type II 3-dehydroquinate dehydratase compare
OLJFJH_06950 -1.2 -4.8 p-hydroxybenzoic acid efflux pump operon protein AaeX compare
OLJFJH_18035 -1.2 -1.5 YajQ family cyclic di-GMP-binding protein compare
OLJFJH_13885 -1.2 -2.3 hypothetical protein compare
OLJFJH_10860 -1.2 -1.5 phosphocarrier protein Hpr compare
OLJFJH_05500 -1.2 -5.6 nitrogen regulation protein NR(II) compare
OLJFJH_08835 -1.2 -2.0 site-specific tyrosine recombinase XerD compare
OLJFJH_10430 -1.2 -1.1 nucleoside-diphosphate kinase compare
OLJFJH_13285 -1.2 -5.8 two-component system response regulator RssB compare
OLJFJH_09325 -1.2 -6.1 sulfate adenylyltransferase subunit CysD compare
OLJFJH_15720 -1.2 -7.5 glucan biosynthesis glucosyltransferase H compare
OLJFJH_11560 -1.2 -3.1 transcriptional regulator RcsB compare
OLJFJH_11450 -1.2 -3.0 NADH-quinone oxidoreductase subunit J compare
OLJFJH_08395 -1.2 -0.8 tetratricopeptide repeat protein compare
OLJFJH_07820 -1.1 -7.4 cystathionine beta-lyase compare
OLJFJH_13130 -1.1 -0.9 hypothetical protein compare
OLJFJH_04145 -1.1 -5.1 Hsp33 family molecular chaperone HslO compare
OLJFJH_11465 -1.1 -4.8 NADH-quinone oxidoreductase subunit M compare
OLJFJH_11445 -1.1 -1.7 NADH-quinone oxidoreductase subunit NuoI compare
OLJFJH_08740 -1.1 -3.5 5-formyltetrahydrofolate cyclo-ligase compare
OLJFJH_13120 -1.1 -1.1 septum site-determining protein MinC compare
OLJFJH_14150 -1.1 -0.6 osmotically-inducible lipoprotein B compare
OLJFJH_09045 -1.1 -0.7 hypothetical protein compare
OLJFJH_11675 -1.1 -1.6 preprotein translocase compare
OLJFJH_00955 -1.1 -5.2 Zn-dependent oxidoreductase compare
OLJFJH_06230 -1.1 -7.9 dihydroxy-acid dehydratase compare
OLJFJH_07320 -1.1 -2.5 2-iminobutanoate/2-iminopropanoate deaminase compare
OLJFJH_15230 -1.1 -0.8 Mig-14 family protein compare
OLJFJH_16960 -1.1 -4.0 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_10195 -1.1 -3.3 hypothetical protein compare
OLJFJH_11435 -1.1 -4.7 NADH-quinone oxidoreductase subunit NuoG compare
OLJFJH_14450 -1.1 -3.5 transcriptional regulator SlyA compare
OLJFJH_04080 -1.1 -2.3 adenine-specific DNA-methyltransferase compare


Specific Phenotypes

None in this experiment