Experiment set2S78 for Erwinia amylovora T8

200 most detrimental genes:

gene	name	fitness	t score	description
OLJFJH_09390		+3.3	3.2	Transposase
OLJFJH_13040		+2.7	2.2	transcription antiterminator/RNA stability regulator CspE
OLJFJH_14150		+2.6	1.4	osmotically-inducible lipoprotein B
OLJFJH_10805		+2.1	4.4	DUF2919 domain-containing protein
OLJFJH_14820		+2.1	7.5	type IVB secretion system protein IcmH/DotU
OLJFJH_15205		+2.1	10.4	muramoyltetrapeptide carboxypeptidase
OLJFJH_01820		+1.9	6.3	hypothetical protein
OLJFJH_11555		+1.8	11.2	two-component system sensor histidine kinase/response regulator
OLJFJH_18035		+1.8	1.6	YajQ family cyclic di-GMP-binding protein
OLJFJH_01830		+1.8	6.4	FHA domain-containing protein
OLJFJH_06000		+1.7	6.0	hypothetical protein
OLJFJH_09810		+1.6	2.3	transcriptional repressor MprA
OLJFJH_03055		+1.6	1.5	hypothetical protein
OLJFJH_15375		+1.6	4.8	flagella biosynthesis chaperone FliJ
OLJFJH_14825		+1.6	8.3	type VI secretion system membrane subunit TssM
OLJFJH_11565		+1.6	10.5	phosphotransferase RcsD
OLJFJH_00820		+1.5	2.1	hypothetical protein
OLJFJH_07040		+1.5	1.7	hypothetical protein
OLJFJH_15185		+1.5	2.4	GlsB/YeaQ/YmgE family stress response membrane protein
OLJFJH_14655		+1.4	1.9	hypothetical protein
OLJFJH_12930		+1.4	1.5	DNA polymerase III subunit theta
OLJFJH_01790		+1.4	6.8	serine/threonine protein kinase
OLJFJH_07160		+1.4	1.5	hypothetical protein
OLJFJH_01860		+1.4	2.0	hypothetical protein
OLJFJH_05080		+1.2	2.7	hypothetical protein
OLJFJH_03270		+1.2	2.0	LysR family transcriptional regulator
OLJFJH_02480		+1.2	1.4	DUF2065 domain-containing protein
OLJFJH_03030		+1.2	2.1	hypothetical protein
OLJFJH_10335		+1.2	2.5	nitrogen regulatory protein P-II
OLJFJH_10170		+1.2	1.3	outer membrane protein assembly factor BamE
OLJFJH_15605		+1.1	1.8	flagellar biosynthesis protein FlgF
OLJFJH_17790		+1.1	4.7	Conserded uncharacterized protein YcfA
OLJFJH_18430		+1.1	4.2	xanthine phosphoribosyltransferase
OLJFJH_10610		+1.1	1.2	hypothetical protein
OLJFJH_10690		+1.1	1.4	RHS domain-containing protein
OLJFJH_09675		+1.1	2.3	hypothetical protein
OLJFJH_10885		+1.0	0.9	cytoplasmic protein
OLJFJH_12430		+1.0	2.5	iron ABC transporter permease
OLJFJH_17795		+1.0	4.3	LysR family transcriptional regulator
OLJFJH_13115		+1.0	1.0	septum site-determining protein MinD
OLJFJH_07945		+1.0	1.1	PTS lactose/cellobiose transporter subunit IIA
OLJFJH_09795		+1.0	1.0	tRNA/rRNA methyltransferase
OLJFJH_15795		+0.9	1.2	UvrY/SirA/GacA family response regulator transcription factor
OLJFJH_01815		+0.9	2.5	protein of avirulence locus ImpE
OLJFJH_13865		+0.9	1.6	Peptidoglycan/LPS O-acetylase OafA/YrhL contains acyltransferase and SGNH-hydrolase domains
OLJFJH_18345		+0.9	2.3	ABC transporter ATP-binding protein
OLJFJH_10050		+0.9	1.6	flagellar basal body rod protein FlgC
OLJFJH_10985		+0.9	1.0	type III effector
OLJFJH_10460		+0.9	3.4	Ancillary SecYEG translocon subunit
OLJFJH_18105		+0.9	1.5	Putative lipoprotein yajI
OLJFJH_01800		+0.9	2.1	Type VI secretion system core protein
OLJFJH_08420		+0.9	2.5	GIY-YIG domain-containing protein
OLJFJH_01810		+0.9	2.2	type VI secretion system baseplate subunit TssE
OLJFJH_16990		+0.9	1.7	pyroglutamyl-peptidase I
OLJFJH_08300		+0.9	1.1	hypothetical protein
OLJFJH_17655		+0.9	0.8	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1
OLJFJH_12265		+0.9	1.1	DUF2000 domain-containing protein
OLJFJH_11875		+0.9	1.4	cytidine deaminase
OLJFJH_03120		+0.9	1.1	hypothetical protein
OLJFJH_07560		+0.8	1.2	transcriptional regulator
OLJFJH_16855		+0.8	1.2	homeobox protein YbgS
OLJFJH_02080		+0.8	1.0	DNA-binding transcriptional repressor
OLJFJH_12055		+0.8	2.1	Amylovoran biosynthesis glycosyltransferase AmsE
OLJFJH_03010		+0.8	1.2	hypothetical protein
OLJFJH_13390		+0.8	2.3	YchE family NAAT transporter
OLJFJH_12020		+0.8	2.7	UDP-galactose-lipid carrier transferase
OLJFJH_06205		+0.8	1.1	Protein of unknown function DUF
OLJFJH_06980		+0.8	2.9	malate dehydrogenase
OLJFJH_17860		+0.8	1.5	type B 50S ribosomal protein L31
OLJFJH_03615		+0.8	3.2	Caps-synth-GfcC domain-containing protein
OLJFJH_06330		+0.8	4.0	ECA oligosaccharide polymerase
OLJFJH_07425		+0.8	1.7	DNA phosphorothioation-dependent restriction protein DptF
OLJFJH_14325		+0.8	1.2	L-arabinose ABC transporter permease AraH
OLJFJH_03470		+0.8	0.8	envelope stress response protein PspG
OLJFJH_14275		+0.8	2.5	transcriptional regulator
OLJFJH_15010		+0.8	0.7	EscR/YscR/HrcR family type III secretion system export apparatus protein
OLJFJH_12370		+0.8	1.4	hypothetical protein
OLJFJH_03375		+0.8	5.8	permease
OLJFJH_11570		+0.8	1.6	MFS transporter
OLJFJH_15510		+0.7	3.2	cell division protein YceG
OLJFJH_04410		+0.7	2.3	7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter
OLJFJH_16810		+0.7	1.9	molybdenum-dependent transcriptional regulator
OLJFJH_08445		+0.7	2.3	hypothetical protein
OLJFJH_09455		+0.7	1.7	type III secretion system gatekeeper subunit SctW
OLJFJH_18425		+0.7	3.7	esterase FrsA
OLJFJH_08585		+0.7	1.8	SprT family zinc-dependent metalloprotease
OLJFJH_01905		+0.7	1.0	SH3 domain-containing protein
OLJFJH_14985		+0.7	1.6	cell division protein FtsQ
OLJFJH_06045		+0.7	1.9	aquaporin
OLJFJH_11360		+0.7	1.5	phosphate acetyltransferase
OLJFJH_04900		+0.7	1.2	MarR family transcriptional regulator
OLJFJH_11645		+0.7	1.9	Peptidoglycan/LPS O-acetylase OafA/YrhL contains acyltransferase and SGNH-hydrolase domains
OLJFJH_16550		+0.7	1.1	amidohydrolase
OLJFJH_05925		+0.7	2.5	tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL
OLJFJH_16430		+0.7	0.5	hypothetical protein
OLJFJH_01710		+0.7	0.9	hypothetical protein
OLJFJH_01805		+0.7	4.1	type VI secretion system baseplate subunit TssF
OLJFJH_01795		+0.7	2.3	type VI secretion system ATPase TssH
OLJFJH_04970		+0.7	2.5	hydroxyacid dehydrogenase
OLJFJH_16500		+0.7	1.3	hypothetical protein
OLJFJH_04895		+0.7	1.5	organic hydroperoxide resistance protein
OLJFJH_16775		+0.7	1.6	kinase inhibitor
OLJFJH_12205		+0.7	2.0	hypothetical protein
OLJFJH_17460		+0.7	1.2	hypothetical protein
OLJFJH_13785		+0.7	1.5	DUF333 domain-containing protein
OLJFJH_10445		+0.7	2.6	cytoskeleton protein RodZ
OLJFJH_13740		+0.7	1.8	fimbrial protein
OLJFJH_00495		+0.7	4.1	Rcs stress response system protein RcsF
OLJFJH_10175		+0.7	1.7	DNA repair protein RecN
OLJFJH_10640		+0.6	3.1	outer membrane protein assembly factor BamC
OLJFJH_01525		+0.6	1.2	inosine/xanthosine triphosphatase
OLJFJH_05740		+0.6	1.2	Tyr recombinase domain-containing protein
OLJFJH_11320		+0.6	0.7	Uncharacterized GST-like protein yfcF
OLJFJH_02285		+0.6	4.7	penicillin-binding protein activator
OLJFJH_18120		+0.6	0.7	preprotein translocase subunit YajC
OLJFJH_12795		+0.6	1.6	Protein yecM
OLJFJH_04735		+0.6	2.5	protease
OLJFJH_08135		+0.6	2.0	RNA polymerase subunit sigma
OLJFJH_18260		+0.6	1.9	IclR family transcriptional regulator
OLJFJH_12270		+0.6	1.4	stress responsive protein
OLJFJH_16060		+0.6	3.8	L D-transpeptidase
OLJFJH_13810		+0.6	1.2	SDR family oxidoreductase
OLJFJH_07115		+0.6	1.7	outer membrane lipid asymmetry maintenance protein MlaD
OLJFJH_12555		+0.6	1.9	RNA polymerase sigma factor FliA
OLJFJH_13950		+0.6	1.5	aromatic acid/H+ symport family MFS transporter
OLJFJH_07280		+0.6	2.4	luciferase-like monooxygenase
OLJFJH_09235		+0.6	3.3	two-component sensor histidine kinase BarA
OLJFJH_15200		+0.6	1.7	membrane-bound lytic murein transglycosylase EmtA
OLJFJH_08450		+0.6	1.9	TraI-2-C domain-containing protein
OLJFJH_15835		+0.6	1.5	EamA family transporter
OLJFJH_08260		+0.6	1.2	DUF2345 domain-containing protein
OLJFJH_11560		+0.6	2.2	transcriptional regulator RcsB
OLJFJH_17220		+0.6	1.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
OLJFJH_15410		+0.6	1.4	flagellar biosynthesis protein FliQ
OLJFJH_16265		+0.6	2.6	arginine ABC transporter ATP-binding protein ArtP
OLJFJH_15365		+0.6	1.4	flagellar assembly protein FliH
OLJFJH_07270		+0.6	1.7	lipoprotein NlpI
OLJFJH_04770		+0.6	1.6	hypothetical protein
OLJFJH_18205		+0.6	2.0	DUF4810 domain-containing protein
OLJFJH_02235		+0.6	1.2	DUF883 domain-containing protein
OLJFJH_12085		+0.6	1.8	UDP-glucose 4-epimerase GalE
OLJFJH_09380		+0.6	2.0	RNA polymerase sigma factor RpoS
OLJFJH_05965		+0.6	2.7	CDP-diacylglycerol diphosphatase
OLJFJH_18275		+0.5	2.6	DUF2076 domain-containing protein
OLJFJH_07485		+0.5	1.2	Rha family transcriptional regulator
OLJFJH_13905		+0.5	0.7	DUF2534 domain-containing protein
OLJFJH_14095		+0.5	0.9	hypothetical protein
OLJFJH_06450		+0.5	1.5	homoserine/homoserine lactone efflux protein
OLJFJH_14260		+0.5	1.1	DUF1161 domain-containing protein
OLJFJH_16470		+0.5	0.5	hypothetical protein
OLJFJH_13925		+0.5	1.9	transcriptional regulator FNR
OLJFJH_18295		+0.5	1.2	phosphate starvation-inducible protein
OLJFJH_09080		+0.5	1.8	DUF2509 domain-containing protein
OLJFJH_09010		+0.5	1.6	hypothetical protein
OLJFJH_01715		+0.5	1.5	RHS domain-containing protein
OLJFJH_16820		+0.5	1.5	galactose-1-phosphate uridylyltransferase
OLJFJH_11510		+0.5	1.8	trehalose-6-phosphate synthase
OLJFJH_16675		+0.5	2.8	L D-transpeptidase
OLJFJH_04055		+0.5	1.4	hypothetical protein
OLJFJH_02965		+0.5	0.7	phosphoribosylamine--glycine ligase
OLJFJH_01470		+0.5	1.0	molybdopterin adenylyltransferase
OLJFJH_10065		+0.5	1.3	flagellar biosynthesis protein FlgF
OLJFJH_15380		+0.5	2.4	flagellar hook-length control protein FliK
OLJFJH_12295		+0.5	2.0	butanediol dehydrogenase
OLJFJH_18070		+0.5	1.6	phosphatidylglycerophosphatase A
OLJFJH_04630		+0.5	1.6	phospholipase
OLJFJH_12660		+0.5	2.2	cytosine permease
OLJFJH_07215		+0.5	1.1	preprotein translocase subunit SecG
OLJFJH_12130		+0.5	0.7	glycosyltransferase family 1 protein
OLJFJH_02240		+0.5	1.7	Membrane protein
OLJFJH_04545		+0.5	1.7	hypothetical protein
OLJFJH_00830		+0.5	0.6	LuxR family transcriptional regulator
OLJFJH_09955		+0.5	1.7	flagellar motor switch protein FliM
OLJFJH_09695		+0.5	1.3	GNAT family N-acetyltransferase
OLJFJH_05585		+0.5	0.8	DNA-binding response regulator
OLJFJH_14660		+0.5	1.6	endopeptidase
OLJFJH_06050		+0.5	1.0	Cell division protein ZapB
OLJFJH_12820		+0.5	1.9	carboxy-S-adenosyl-L-methionine synthase CmoA
OLJFJH_16450		+0.5	0.7	DksA/TraR family C4-type zinc finger protein
OLJFJH_06945		+0.5	2.0	HTH-type transcriptional activator AaeR
OLJFJH_09110		+0.5	2.1	DUF1440 domain-containing protein
OLJFJH_10900		+0.5	0.5	FlxA-like family protein
OLJFJH_11070		+0.5	1.5	response regulator
OLJFJH_02455		+0.5	1.7	methyl-accepting chemotaxis protein
OLJFJH_18495		+0.5	1.1	hypothetical protein
OLJFJH_09360		+0.5	1.0	tRNA pseudouridine(13) synthase TruD
OLJFJH_01900		+0.5	0.5	type VI secretion system lipoprotein TssJ
OLJFJH_13195		+0.5	2.9	UPF0229 protein ETA_15540
OLJFJH_10025		+0.5	1.1	flagellar protein FliT
OLJFJH_04345		+0.5	1.8	high-affinity branched-chain amino acid ABC transporter permease LivM
OLJFJH_01135		+0.5	1.1	type II secretion system minor pseudopilin GspI
OLJFJH_15545		+0.5	0.6	phosphate acyltransferase PlsX
OLJFJH_10890		+0.5	1.7	Sodium Bile acid symporter family
OLJFJH_02270		+0.5	0.8	Conserved uncharacterized protein
OLJFJH_15400		+0.5	2.8	flagellar biosynthetic protein FliO
OLJFJH_03585		+0.5	1.0	diacylglycerol kinase
OLJFJH_17025		+0.5	1.4	DUF2517 domain-containing protein
OLJFJH_06015		+0.5	0.7	DUF805 domain-containing protein
OLJFJH_11235		+0.5	0.6	aspartate-semialdehyde dehydrogenase
OLJFJH_14675		+0.5	1.0	hypothetical protein

Specific Phenotypes

For 1 genes in this experiment