Experiment set2S74 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:Fifi044;Temp:17;Samp:5-3

200 most important genes:

  gene name fitness t score description  
OLJFJH_07335 -4.8 -18.4 ornithine carbamoyltransferase compare
OLJFJH_04030 -4.5 -17.1 bifunctional succinylornithine transaminase/acetylornithine transaminase compare
OLJFJH_06125 -4.2 -15.5 argininosuccinate synthase compare
OLJFJH_10590 -4.1 -10.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_06785 -4.1 -19.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_09115 -4.1 -13.9 amino-acid N-acetyltransferase compare
OLJFJH_06115 -4.1 -16.3 acetylornithine deacetylase compare
OLJFJH_12050 -4.0 -4.8 Amylovoran biosynthesis glycosyltransferase AmsD compare
OLJFJH_06780 -4.0 -19.7 phosphoribosylamine--glycine ligase compare
OLJFJH_06130 -4.0 -22.3 argininosuccinate lyase compare
OLJFJH_12075 -3.9 -18.1 Amylovoran biosynthesis protein AmsL compare
OLJFJH_01400 -3.9 -18.5 carbamoyl phosphate synthase small subunit compare
OLJFJH_11280 -3.9 -17.8 amidophosphoribosyltransferase compare
OLJFJH_10500 -3.9 -5.3 IMP dehydrogenase compare
OLJFJH_06120 -3.9 -6.4 acetylglutamate kinase compare
OLJFJH_15175 -3.9 -17.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
OLJFJH_10305 -3.8 -17.0 phosphoribosylformylglycinamidine synthase compare
OLJFJH_10645 -3.8 -5.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_17720 -3.8 -9.4 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_01395 -3.6 -16.2 carbamoyl-phosphate synthase large subunit compare
OLJFJH_08880 -3.5 -13.5 diaminopimelate decarboxylase compare
OLJFJH_12040 -3.4 -8.9 Amylovoran biosynthesis glycosyltransferase AmsB compare
OLJFJH_06105 -3.3 -16.0 methylenetetrahydrofolate reductase compare
OLJFJH_06480 -3.3 -17.7 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
OLJFJH_12165 -3.2 -6.6 imidazole glycerol phosphate synthase subunit HisH compare
OLJFJH_12155 -3.2 -9.0 imidazole glycerol phosphate synthase subunit HisF compare
OLJFJH_17635 -3.2 -13.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_12070 -3.2 -12.1 Amylovoran biosynthesis glycosyltransferase AmsK compare
OLJFJH_12065 -3.2 -12.5 colanic acid biosynthesis pyruvyl transferase WcaK compare
OLJFJH_05510 -3.1 -6.8 ribosome-dependent GTPase TypA compare
OLJFJH_05635 -3.0 -3.2 beta family protein compare
OLJFJH_06475 -3.0 -9.0 HTH-type transcriptional regulator MetR compare
OLJFJH_13355 -3.0 -9.6 4-oxalmesaconate hydratase compare
OLJFJH_05615 -2.9 -2.6 Conserved uncharacterized protein compare
OLJFJH_17630 -2.9 -1.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_16950 -2.8 -3.6 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_12175 -2.7 -11.6 histidinol-phosphate transaminase compare
OLJFJH_13350 -2.7 -8.3 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_12180 -2.6 -15.8 histidinol dehydrogenase compare
OLJFJH_17775 -2.6 -12.9 EamA-like transporter family compare
OLJFJH_13345 -2.6 -4.3 4-oxalomesaconate tautomerase compare
OLJFJH_08795 -2.6 -13.2 hydrolase compare
OLJFJH_13470 -2.6 -12.5 tryptophan synthase subunit alpha compare
OLJFJH_12170 -2.6 -9.1 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
OLJFJH_13475 -2.6 -14.5 tryptophan synthase subunit beta compare
OLJFJH_15670 -2.6 -7.4 dihydroorotase compare
OLJFJH_12150 -2.5 -5.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
OLJFJH_01295 -2.5 -14.3 3-isopropylmalate dehydratase large subunit compare
OLJFJH_01290 -2.5 -19.6 3-isopropylmalate dehydrogenase compare
OLJFJH_01485 -2.5 -14.0 threonine synthase compare
OLJFJH_15720 -2.5 -16.3 glucan biosynthesis glucosyltransferase H compare
OLJFJH_15725 -2.4 -7.3 glucan biosynthesis protein G compare
OLJFJH_01300 -2.4 -5.5 3-isopropylmalate dehydratase small subunit compare
OLJFJH_09065 -2.4 -1.7 thymidylate synthase compare
OLJFJH_13570 -2.4 -8.4 orotidine-5'-phosphate decarboxylase compare
OLJFJH_13480 -2.4 -8.4 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
OLJFJH_08875 -2.4 -9.8 LysR family transcriptional regulator compare
OLJFJH_15990 -2.3 -8.6 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_03580 -2.3 -1.2 transcriptional repressor LexA compare
OLJFJH_12885 -2.3 -8.1 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_10860 -2.2 -2.6 phosphocarrier protein Hpr compare
OLJFJH_12185 -2.2 -7.4 ATP phosphoribosyltransferase compare
OLJFJH_01370 -2.2 -3.3 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_01490 -2.2 -11.0 homoserine kinase compare
OLJFJH_05470 -2.2 -2.2 DNA polymerase I compare
OLJFJH_11230 -2.2 -3.9 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_10165 -2.1 -2.0 RnfH family protein compare
OLJFJH_05495 -2.1 -10.4 nitrogen regulation protein NR(I) compare
OLJFJH_12035 -2.1 -16.6 Putative tyrosine-protein kinase AmsA compare
OLJFJH_09390 -2.1 -0.8 Transposase compare
OLJFJH_05770 -2.1 -5.1 orotate phosphoribosyltransferase compare
OLJFJH_13510 -2.0 -6.4 23S rRNA pseudouridine(2605) synthase RluB compare
OLJFJH_07675 -2.0 -10.8 outer membrane channel protein TolC compare
OLJFJH_13485 -2.0 -4.5 Anthranilate phosphoribosyltransferase compare
OLJFJH_17850 -2.0 -12.9 efflux transporter periplasmic adaptor subunit compare
OLJFJH_09590 -2.0 -2.4 carbon storage regulator CsrA compare
OLJFJH_17855 -2.0 -13.6 multidrug efflux RND transporter permease subunit AcrB compare
OLJFJH_14950 -2.0 -7.2 redox-regulated ATPase YchF compare
OLJFJH_12160 -2.0 -1.0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_17880 -1.9 -2.0 transcriptional regulator compare
OLJFJH_06225 -1.9 -13.0 branched-chain-amino-acid transaminase compare
OLJFJH_12025 -1.9 -11.2 Amylovoran export outer membrane protein AmsH compare
OLJFJH_07820 -1.9 -12.5 cystathionine beta-lyase compare
OLJFJH_09105 -1.8 -4.0 exodeoxyribonuclease V subunit alpha compare
OLJFJH_12030 -1.8 -11.6 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OLJFJH_06245 -1.8 -13.1 ketol-acid reductoisomerase compare
OLJFJH_18015 -1.8 -4.4 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_06095 -1.8 -9.6 cystathionine gamma-synthase compare
OLJFJH_04160 -1.8 -4.3 two-component system response regulator OmpR compare
OLJFJH_10200 -1.7 -5.4 ATP-dependent RNA helicase SrmB compare
OLJFJH_05630 -1.7 -1.6 sce7726 family protein compare
OLJFJH_15555 -1.7 -1.8 23S rRNA accumulation protein YceD compare
OLJFJH_13495 -1.7 -10.5 anthranilate synthase component 1 compare
OLJFJH_10855 -1.7 -11.2 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_07330 -1.6 -10.0 aspartate carbamoyltransferase compare
OLJFJH_03260 -1.6 -8.5 translation factor (SUA5) compare
OLJFJH_05910 -1.6 -7.2 protein-export chaperone SecB compare
OLJFJH_02090 -1.6 -7.9 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_10215 -1.6 -7.2 RNA polymerase sigma factor RpoE compare
OLJFJH_05645 -1.6 -1.2 hypothetical protein compare
OLJFJH_00955 -1.6 -6.8 Zn-dependent oxidoreductase compare
OLJFJH_06545 -1.6 -3.6 NAD(P)H-flavin reductase compare
OLJFJH_01850 -1.6 -1.6 Putative cytoplasmic protein compare
OLJFJH_09310 -1.6 -5.1 phosphoadenylyl-sulfate reductase compare
OLJFJH_11625 -1.5 -3.9 Conserved uncharacterized protein compare
OLJFJH_13130 -1.5 -1.1 hypothetical protein compare
OLJFJH_05730 -1.5 -0.6 hypothetical protein compare
OLJFJH_06230 -1.5 -11.4 dihydroxy-acid dehydratase compare
OLJFJH_06515 -1.5 -1.4 twin-arginine translocase subunit TatA compare
OLJFJH_01595 -1.5 -4.0 phosphoserine phosphatase compare
OLJFJH_13490 -1.5 -2.3 anthranilate synthase component II compare
OLJFJH_04990 -1.5 -1.9 mannitol-1-phosphate 5-dehydrogenase compare
OLJFJH_01285 -1.5 -7.5 2-isopropylmalate synthase compare
OLJFJH_16040 -1.5 -8.2 Outer membrane porin OmpC/OmpF/PhoE compare
OLJFJH_16955 -1.5 -2.6 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_15090 -1.4 -1.2 Conserved uncharacterized protein compare
OLJFJH_00700 -1.4 -2.2 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
OLJFJH_02970 -1.4 -5.9 histidine--tRNA ligase compare
OLJFJH_03650 -1.4 -10.2 homoserine O-succinyltransferase compare
OLJFJH_00595 -1.4 -5.2 sigma E protease regulator RseP compare
OLJFJH_08735 -1.4 -7.1 phosphoglycerate dehydrogenase compare
OLJFJH_01380 -1.4 -5.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
OLJFJH_06985 -1.4 -9.4 outer membrane-stress sensor serine endopeptidase DegS compare
OLJFJH_17810 -1.4 -3.0 YbaB/EbfC family nucleoid-associated protein compare
OLJFJH_01835 -1.4 -4.4 T6SS amidase immunity protein Tai4 family protein compare
OLJFJH_13530 -1.4 -2.5 HTH-type transcriptional regulator CysB compare
OLJFJH_12045 -1.3 -1.4 Amylovoran biosynthesis protein AmsC compare
OLJFJH_05500 -1.3 -6.2 nitrogen regulation protein NR(II) compare
OLJFJH_17090 -1.3 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
OLJFJH_06535 -1.3 -5.0 transcription/translation regulatory transformer protein RfaH compare
OLJFJH_10430 -1.3 -1.5 nucleoside-diphosphate kinase compare
OLJFJH_10585 -1.3 -10.0 phosphoribosylglycinamide formyltransferase compare
OLJFJH_07070 -1.3 -6.3 RNA polymerase factor sigma-54 compare
OLJFJH_00745 -1.2 -8.8 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_13240 -1.2 -3.8 asparaginase compare
OLJFJH_12765 -1.2 -2.1 chemotaxis regulatory protein CheY compare
OLJFJH_03710 -1.2 -0.6 peptide deformylase compare
OLJFJH_10360 -1.2 -1.8 Fe-S cluster assembly transcriptional regulator IscR compare
OLJFJH_16940 -1.2 -6.0 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_14840 -1.2 -4.7 gamma-glutamylcyclotransferase compare
OLJFJH_02410 -1.2 -2.3 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_15515 -1.2 -4.2 aminodeoxychorismate lyase compare
OLJFJH_01770 -1.1 -6.1 hypothetical protein compare
OLJFJH_03535 -1.1 -0.9 hypothetical protein compare
OLJFJH_15800 -1.1 -1.5 DUF2594 domain-containing protein compare
OLJFJH_16980 -1.1 -7.7 citrate synthase compare
OLJFJH_14495 -1.1 -5.8 ribonuclease T compare
OLJFJH_11930 -1.1 -6.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
OLJFJH_11275 -1.1 -4.1 colicin V production protein compare
OLJFJH_13885 -1.1 -2.7 hypothetical protein compare
OLJFJH_13645 -1.1 -6.0 peptide ABC transporter ATP-binding protein SapD compare
OLJFJH_14370 -1.1 -0.9 electron transport complex subunit RsxC compare
OLJFJH_16965 -1.1 -2.5 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_06735 -1.1 -7.2 thiamine phosphate synthase compare
OLJFJH_05915 -1.1 -6.5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
OLJFJH_03725 -1.0 -7.4 Trk system potassium transporter TrkA compare
OLJFJH_11455 -1.0 -0.8 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_01495 -1.0 -7.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
OLJFJH_02470 -1.0 -7.9 ribonuclease R compare
OLJFJH_07275 -1.0 -1.9 DEAD/DEAH family ATP-dependent RNA helicase compare
OLJFJH_03945 -1.0 -0.8 peptidylprolyl isomerase compare
OLJFJH_01730 -1.0 -1.2 hypothetical protein compare
OLJFJH_16870 -1.0 -1.0 glycosyltransferase compare
OLJFJH_10220 -1.0 -0.6 anti-sigma-E factor RseA compare
OLJFJH_14245 -1.0 -1.6 hypothetical protein compare
OLJFJH_13115 -1.0 -1.9 septum site-determining protein MinD compare
OLJFJH_15005 -1.0 -1.2 type III secretion system export apparatus subunit SctS compare
OLJFJH_09725 -1.0 -4.1 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
OLJFJH_03950 -1.0 -0.6 DUF2387 domain-containing protein compare
OLJFJH_04910 -1.0 -0.8 hypothetical protein compare
OLJFJH_04305 -1.0 -0.6 DUF2756 domain-containing protein compare
OLJFJH_04080 -1.0 -2.3 adenine-specific DNA-methyltransferase compare
OLJFJH_12845 -1.0 -2.3 YebC/PmpR family DNA-binding transcriptional regulator compare
OLJFJH_07025 -0.9 -6.3 sulfite reductase subunit alpha compare
OLJFJH_01375 -0.9 -3.2 Co2+/Mg2+ efflux protein ApaG compare
OLJFJH_15075 -0.9 -0.7 type III secretion system inner rod subunit SctI compare
OLJFJH_02495 -0.9 -4.0 GTPase HflX compare
OLJFJH_16190 -0.9 -3.3 thioredoxin-disulfide reductase compare
OLJFJH_16960 -0.9 -4.1 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_08390 -0.9 -1.0 DUF4365 domain-containing protein compare
OLJFJH_18025 -0.9 -2.7 heme o synthase compare
OLJFJH_09305 -0.9 -3.6 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
OLJFJH_10940 -0.9 -0.8 tRNA-Ala compare
OLJFJH_06320 -0.9 -3.6 lipid III flippase WzxE compare
OLJFJH_18630 -0.9 -0.7 ribonuclease HI compare
OLJFJH_16315 -0.9 -2.0 YbjN domain-containing protein compare
OLJFJH_08570 -0.9 -4.6 glutathione synthase compare
OLJFJH_07030 -0.9 -6.8 glutamate synthase large subunit compare
OLJFJH_00815 -0.9 -2.6 hypoxanthine phosphoribosyltransferase compare
OLJFJH_09610 -0.9 -0.4 tRNA-Arg compare
OLJFJH_11425 -0.9 -1.4 NADH-quinone oxidoreductase subunit NuoE compare
OLJFJH_01895 -0.8 -5.1 type VI secretion system baseplate subunit TssK compare
OLJFJH_15450 -0.8 -4.2 Glycine zipper 2TM domain-containing protein compare
OLJFJH_03565 -0.8 -4.5 zinc uptake transcriptional repressor Zur compare
OLJFJH_09375 -0.8 -3.5 murein hydrolase activator NlpD compare
OLJFJH_08835 -0.8 -1.9 site-specific tyrosine recombinase XerD compare
OLJFJH_00695 -0.8 -1.8 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
OLJFJH_10700 -0.8 -0.7 type IV secretion protein Rhs compare
OLJFJH_09335 -0.8 -3.3 Adenylyl-sulfate kinase compare
OLJFJH_07090 -0.8 -3.1 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare


Specific Phenotypes

None in this experiment