Experiment set2S734 for Escherichia coli ECOR27

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Casamino-acids

Genes with specific phenotypes:

  gene name fitness t score description  
NOLOHH_05455 purH -5.6 -17.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
NOLOHH_13145 purL -5.3 -20.8 phosphoribosylformylglycinamidine synthase compare
NOLOHH_13455 purN -5.1 -12.0 phosphoribosylglycinamide formyltransferase conserved
NOLOHH_13460 purM -4.9 -7.3 Phosphoribosylformylglycinamidine cyclo-ligase compare
NOLOHH_14335 purF -4.9 -8.5 amidophosphoribosyltransferase compare
NOLOHH_05460 purD -4.5 -10.6 Phosphoribosylamine--glycine ligase compare
NOLOHH_03270 carB -4.4 -13.6 carbamoyl-phosphate synthase large subunit compare
NOLOHH_03275 carA -4.2 -10.6 carbamoyl phosphate synthase small subunit compare
NOLOHH_07480 pyrE -4.1 -7.4 Orotate phosphoribosyltransferase compare
NOLOHH_04125 pyrB -4.1 -12.8 aspartate carbamoyltransferase compare
NOLOHH_14295 pdxB -4.0 -6.0 4-phosphoerythronate dehydrogenase PdxB compare
NOLOHH_03175 pdxA -3.0 -6.5 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
NOLOHH_23190 nadA -3.0 -5.5 quinolinate synthase NadA conserved
NOLOHH_02875 nadC -2.9 -7.4 carboxylating nicotinate-nucleotide diphosphorylase conserved
NOLOHH_02745 panB -2.3 -5.9 3-methyl-2-oxobutanoate hydroxymethyltransferase conserved
NOLOHH_04695 aspA -2.1 -10.9 aspartate ammonia-lyase conserved
NOLOHH_20325 trpD -2.1 -6.9 bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD compare
NOLOHH_08530 panM -2.0 -5.6 aspartate 1-decarboxylase autocleavage activator PanM conserved
NOLOHH_02750 panC -2.0 -6.7 pantoate--beta-alanine ligase conserved
NOLOHH_02760 panD -1.6 -5.8 aspartate 1-decarboxylase compare
NOLOHH_13045 nadB -1.5 -9.7 L-aspartate oxidase conserved
NOLOHH_05540 thiG -1.5 -6.5 thiazole synthase compare
NOLOHH_05520 thiC -1.3 -8.2 phosphomethylpyrimidine synthase ThiC conserved
NOLOHH_05530 thiF -1.2 -5.6 thiazole biosynthesis adenylyltransferase ThiF conserved
NOLOHH_05525 thiE -1.1 -5.7 thiamine phosphate synthase conserved


Specific phenotypes for carbon source Casamino-acids across organisms