Experiment set2S71 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:inactivated cocktail;Temp:28;Samp:15-8

200 most important genes:

  gene name fitness t score description  
OLJFJH_17635 -4.1 -11.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_12075 -4.0 -17.0 Amylovoran biosynthesis protein AmsL compare
OLJFJH_12965 -3.9 -1.5 Lysine exporter LysO compare
OLJFJH_17630 -3.9 -0.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_06785 -3.7 -17.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_11280 -3.7 -12.8 amidophosphoribosyltransferase compare
OLJFJH_12070 -3.6 -9.4 Amylovoran biosynthesis glycosyltransferase AmsK compare
OLJFJH_06780 -3.6 -15.0 phosphoribosylamine--glycine ligase compare
OLJFJH_01400 -3.6 -15.9 carbamoyl phosphate synthase small subunit compare
OLJFJH_10590 -3.5 -8.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_12040 -3.5 -6.6 Amylovoran biosynthesis glycosyltransferase AmsB compare
OLJFJH_01395 -3.4 -13.9 carbamoyl-phosphate synthase large subunit compare
OLJFJH_05310 -3.4 -1.7 F0F1 ATP synthase subunit I compare
OLJFJH_06130 -3.4 -19.9 argininosuccinate lyase compare
OLJFJH_10645 -3.3 -3.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_17720 -3.3 -7.2 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_15175 -3.3 -13.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
OLJFJH_07335 -3.3 -16.2 ornithine carbamoyltransferase compare
OLJFJH_09115 -3.3 -11.9 amino-acid N-acetyltransferase compare
OLJFJH_05615 -3.3 -1.9 Conserved uncharacterized protein compare
OLJFJH_10305 -3.2 -16.1 phosphoribosylformylglycinamidine synthase compare
OLJFJH_12045 -3.2 -1.6 Amylovoran biosynthesis protein AmsC compare
OLJFJH_06120 -3.2 -4.2 acetylglutamate kinase compare
OLJFJH_11670 -3.1 -0.8 Tyrosine recombinase xerD compare
OLJFJH_04030 -3.1 -14.2 bifunctional succinylornithine transaminase/acetylornithine transaminase compare
OLJFJH_12050 -3.1 -2.8 Amylovoran biosynthesis glycosyltransferase AmsD compare
OLJFJH_06115 -3.0 -12.8 acetylornithine deacetylase compare
OLJFJH_13570 -3.0 -7.5 orotidine-5'-phosphate decarboxylase compare
OLJFJH_06125 -3.0 -14.2 argininosuccinate synthase compare
OLJFJH_03580 -3.0 -0.8 transcriptional repressor LexA compare
OLJFJH_10940 -2.9 -0.9 tRNA-Ala compare
OLJFJH_14370 -2.9 -1.0 electron transport complex subunit RsxC compare
OLJFJH_12165 -2.8 -6.2 imidazole glycerol phosphate synthase subunit HisH compare
OLJFJH_12065 -2.8 -8.7 colanic acid biosynthesis pyruvyl transferase WcaK compare
OLJFJH_10500 -2.8 -4.0 IMP dehydrogenase compare
OLJFJH_12035 -2.8 -20.8 Putative tyrosine-protein kinase AmsA compare
OLJFJH_08880 -2.8 -10.2 diaminopimelate decarboxylase compare
OLJFJH_06995 -2.7 -2.8 Z-ring associated protein ZapG compare
OLJFJH_15990 -2.7 -8.5 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_12025 -2.6 -12.8 Amylovoran export outer membrane protein AmsH compare
OLJFJH_12170 -2.6 -9.0 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
OLJFJH_13350 -2.6 -5.8 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_16950 -2.5 -1.9 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_13345 -2.5 -3.0 4-oxalomesaconate tautomerase compare
OLJFJH_12155 -2.5 -4.2 imidazole glycerol phosphate synthase subunit HisF compare
OLJFJH_13355 -2.5 -7.9 4-oxalmesaconate hydratase compare
OLJFJH_05495 -2.5 -9.9 nitrogen regulation protein NR(I) compare
OLJFJH_12175 -2.4 -7.7 histidinol-phosphate transaminase compare
OLJFJH_07330 -2.3 -9.9 aspartate carbamoyltransferase compare
OLJFJH_06105 -2.3 -12.6 methylenetetrahydrofolate reductase compare
OLJFJH_05470 -2.3 -1.0 DNA polymerase I compare
OLJFJH_16980 -2.3 -11.4 citrate synthase compare
OLJFJH_06985 -2.3 -9.6 outer membrane-stress sensor serine endopeptidase DegS compare
OLJFJH_10165 -2.3 -0.9 RnfH family protein compare
OLJFJH_00745 -2.2 -13.7 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_10215 -2.2 -6.8 RNA polymerase sigma factor RpoE compare
OLJFJH_12030 -2.2 -11.3 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OLJFJH_06480 -2.2 -15.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
OLJFJH_06475 -2.2 -6.1 HTH-type transcriptional regulator MetR compare
OLJFJH_12150 -2.2 -4.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
OLJFJH_10860 -2.2 -1.6 phosphocarrier protein Hpr compare
OLJFJH_15725 -2.1 -6.7 glucan biosynthesis protein G compare
OLJFJH_12180 -2.1 -12.5 histidinol dehydrogenase compare
OLJFJH_16940 -2.0 -7.4 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_05770 -2.0 -3.3 orotate phosphoribosyltransferase compare
OLJFJH_11065 -1.9 -1.0 GNAT family N-acetyltransferase compare
OLJFJH_18020 -1.9 -2.9 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_01490 -1.8 -8.3 homoserine kinase compare
OLJFJH_15670 -1.8 -3.8 dihydroorotase compare
OLJFJH_10855 -1.8 -9.2 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_03650 -1.8 -11.9 homoserine O-succinyltransferase compare
OLJFJH_07060 -1.7 -4.3 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_00700 -1.7 -1.6 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
OLJFJH_05630 -1.7 -1.1 sce7726 family protein compare
OLJFJH_16870 -1.7 -0.9 glycosyltransferase compare
OLJFJH_13470 -1.7 -7.1 tryptophan synthase subunit alpha compare
OLJFJH_09725 -1.7 -5.0 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
OLJFJH_13250 -1.7 -1.7 NAD(P)H nitroreductase compare
OLJFJH_13590 -1.7 -0.7 osmotically-inducible lipoprotein OsmB compare
OLJFJH_07675 -1.7 -6.3 outer membrane channel protein TolC compare
OLJFJH_14045 -1.7 -1.7 transcriptional regulator compare
OLJFJH_15515 -1.7 -4.8 aminodeoxychorismate lyase compare
OLJFJH_11425 -1.7 -1.6 NADH-quinone oxidoreductase subunit NuoE compare
OLJFJH_09375 -1.7 -6.5 murein hydrolase activator NlpD compare
OLJFJH_12885 -1.7 -5.8 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_16955 -1.6 -1.7 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_15015 -1.6 -1.4 Type III flagellar switch regulator (C-ring) FliN C-term compare
OLJFJH_01485 -1.6 -6.5 threonine synthase compare
OLJFJH_06535 -1.6 -4.9 transcription/translation regulatory transformer protein RfaH compare
OLJFJH_13980 -1.6 -0.6 hypothetical protein compare
OLJFJH_15720 -1.6 -8.1 glucan biosynthesis glucosyltransferase H compare
OLJFJH_15635 -1.6 -1.0 anti-sigma-28 factor FlgM compare
OLJFJH_10675 -1.6 -1.4 hypothetical protein compare
OLJFJH_08735 -1.6 -7.4 phosphoglycerate dehydrogenase compare
OLJFJH_10360 -1.6 -1.2 Fe-S cluster assembly transcriptional regulator IscR compare
OLJFJH_16935 -1.6 -6.9 succinate--CoA ligase subunit alpha compare
OLJFJH_04305 -1.6 -0.5 DUF2756 domain-containing protein compare
OLJFJH_17040 -1.6 -1.1 replication initiation negative regulator SeqA compare
OLJFJH_03710 -1.6 -0.4 peptide deformylase compare
OLJFJH_02090 -1.5 -6.0 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_17775 -1.5 -7.8 EamA-like transporter family compare
OLJFJH_03055 -1.5 -1.4 hypothetical protein compare
OLJFJH_06225 -1.5 -10.1 branched-chain-amino-acid transaminase compare
OLJFJH_18025 -1.5 -2.6 heme o synthase compare
OLJFJH_09105 -1.5 -2.8 exodeoxyribonuclease V subunit alpha compare
OLJFJH_14950 -1.5 -5.6 redox-regulated ATPase YchF compare
OLJFJH_11230 -1.5 -2.2 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_12160 -1.5 -0.6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_09610 -1.5 -0.4 tRNA-Arg compare
OLJFJH_05955 -1.5 -7.9 6-phosphofructokinase compare
OLJFJH_00690 -1.5 -3.7 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
OLJFJH_09915 -1.4 -1.0 flagellar hook-basal body complex protein FliE compare
OLJFJH_09065 -1.4 -0.8 thymidylate synthase compare
OLJFJH_16180 -1.4 -5.2 cell division protein FtsK compare
OLJFJH_18015 -1.4 -3.0 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_13475 -1.4 -10.2 tryptophan synthase subunit beta compare
OLJFJH_07185 -1.4 -2.9 transcription elongation factor GreA compare
OLJFJH_06095 -1.4 -6.7 cystathionine gamma-synthase compare
OLJFJH_17090 -1.4 -1.8 N-acetylglucosamine-6-phosphate deacetylase compare
OLJFJH_04160 -1.4 -3.4 two-component system response regulator OmpR compare
OLJFJH_14150 -1.4 -0.5 osmotically-inducible lipoprotein B compare
OLJFJH_13365 -1.4 -1.9 type II 3-dehydroquinate dehydratase compare
OLJFJH_16965 -1.4 -2.3 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_10465 -1.4 -1.5 outer membrane protein assembly factor BamB compare
OLJFJH_18405 -1.3 -1.8 glutamate-5-semialdehyde dehydrogenase compare
OLJFJH_01730 -1.3 -1.0 hypothetical protein compare
OLJFJH_07070 -1.3 -5.2 RNA polymerase factor sigma-54 compare
OLJFJH_06320 -1.3 -3.0 lipid III flippase WzxE compare
OLJFJH_16900 -1.3 -3.3 cell division protein CpoB compare
OLJFJH_05550 -1.3 -4.7 ATP-dependent DNA helicase RecG compare
OLJFJH_01995 -1.3 -1.2 DUF2931 domain-containing protein compare
OLJFJH_09305 -1.3 -6.4 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
OLJFJH_05510 -1.3 -3.9 ribosome-dependent GTPase TypA compare
OLJFJH_12845 -1.2 -2.5 YebC/PmpR family DNA-binding transcriptional regulator compare
OLJFJH_06975 -1.2 -1.7 transcriptional regulator ArgR compare
OLJFJH_05500 -1.2 -4.3 nitrogen regulation protein NR(II) compare
OLJFJH_07830 -1.2 -2.2 TonB system transport protein ExbD compare
OLJFJH_00815 -1.2 -2.5 hypoxanthine phosphoribosyltransferase compare
OLJFJH_11445 -1.2 -1.8 NADH-quinone oxidoreductase subunit NuoI compare
OLJFJH_11320 -1.2 -0.6 Uncharacterized GST-like protein yfcF compare
OLJFJH_00695 -1.2 -1.7 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
OLJFJH_02410 -1.2 -4.2 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_03450 -1.2 -2.6 aromatic amino acid aminotransferase compare
OLJFJH_04990 -1.2 -1.2 mannitol-1-phosphate 5-dehydrogenase compare
OLJFJH_07820 -1.2 -8.5 cystathionine beta-lyase compare
OLJFJH_05870 -1.2 -3.8 lipopolysaccharide biosynthesis protein compare
OLJFJH_05850 -1.2 -6.1 deacetylase compare
OLJFJH_01300 -1.2 -2.9 3-isopropylmalate dehydratase small subunit compare
OLJFJH_07825 -1.2 -3.2 tol-pal system-associated acyl-CoA thioesterase compare
OLJFJH_02365 -1.2 -3.8 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
OLJFJH_17235 -1.2 -0.9 hypothetical protein compare
OLJFJH_05920 -1.2 -3.3 serine O-acetyltransferase compare
OLJFJH_05860 -1.2 -3.1 glycosyl transferase compare
OLJFJH_18305 -1.2 -0.7 cold-shock protein compare
OLJFJH_09335 -1.2 -5.3 Adenylyl-sulfate kinase compare
OLJFJH_01290 -1.2 -9.2 3-isopropylmalate dehydrogenase compare
OLJFJH_13440 -1.2 -1.1 TonB system transport protein TonB compare
OLJFJH_03965 -1.1 -6.3 ABC transporter ATP-binding protein compare
OLJFJH_13240 -1.1 -3.0 asparaginase compare
OLJFJH_07125 -1.1 -1.8 lipid asymmetry maintenance protein MlaB compare
OLJFJH_12100 -1.1 -1.5 NAD-dependent dehydratase compare
OLJFJH_15475 -1.1 -3.5 penicillin-binding protein activator LpoB compare
OLJFJH_14345 -1.1 -0.9 Ribulokinase compare
OLJFJH_01295 -1.1 -6.7 3-isopropylmalate dehydratase large subunit compare
OLJFJH_10430 -1.1 -0.8 nucleoside-diphosphate kinase compare
OLJFJH_16190 -1.1 -3.6 thioredoxin-disulfide reductase compare
OLJFJH_09575 -1.1 -2.1 recombinase RecA compare
OLJFJH_12670 -1.1 -5.9 flippase compare
OLJFJH_00595 -1.1 -2.9 sigma E protease regulator RseP compare
OLJFJH_13490 -1.0 -1.5 anthranilate synthase component II compare
OLJFJH_12185 -1.0 -3.7 ATP phosphoribosyltransferase compare
OLJFJH_15330 -1.0 -0.8 hypothetical protein compare
OLJFJH_09445 -1.0 -0.7 AraC family transcriptional regulator compare
OLJFJH_16780 -1.0 -2.2 6-phosphogluconolactonase compare
OLJFJH_16820 -1.0 -2.7 galactose-1-phosphate uridylyltransferase compare
OLJFJH_09490 -1.0 -0.8 EscR/YscR/HrcR family type III secretion system export apparatus protein compare
OLJFJH_15555 -1.0 -0.8 23S rRNA accumulation protein YceD compare
OLJFJH_16960 -1.0 -3.2 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_11410 -1.0 -2.7 NADH-quinone oxidoreductase subunit NuoA compare
OLJFJH_13655 -1.0 -4.9 putrescine ABC transporter permease SapB compare
OLJFJH_17505 -1.0 -1.2 hypothetical protein compare
OLJFJH_16325 -1.0 -1.5 DUF1418 domain-containing protein compare
OLJFJH_11435 -1.0 -4.0 NADH-quinone oxidoreductase subunit NuoG compare
OLJFJH_15115 -1.0 -0.6 YgdI/YgdR family lipoprotein compare
OLJFJH_12850 -1.0 -0.9 crossover junction endodeoxyribonuclease RuvC compare
OLJFJH_01615 -1.0 -5.3 phosphopentomutase compare
OLJFJH_01475 -1.0 -4.0 transaldolase B compare
OLJFJH_05105 -1.0 -4.2 glyoxylate/hydroxypyruvate reductase GhrB compare
OLJFJH_16495 -1.0 -1.4 hypothetical protein compare
OLJFJH_08875 -1.0 -4.9 LysR family transcriptional regulator compare
OLJFJH_18395 -1.0 -2.1 fluoride efflux transporter CrcB compare
OLJFJH_13495 -1.0 -6.7 anthranilate synthase component 1 compare
OLJFJH_15235 -0.9 -0.9 Putative glycosyl transferase compare
OLJFJH_14990 -0.9 -1.9 SycD/LcrH family type III secretion system chaperone compare
OLJFJH_01375 -0.9 -2.2 Co2+/Mg2+ efflux protein ApaG compare
OLJFJH_02500 -0.9 -2.3 RNA chaperone Hfq compare
OLJFJH_01285 -0.9 -4.4 2-isopropylmalate synthase compare
OLJFJH_10585 -0.9 -6.5 phosphoribosylglycinamide formyltransferase compare
OLJFJH_03740 -0.9 -0.5 alternative ribosome-rescue factor A compare
OLJFJH_13130 -0.9 -0.6 hypothetical protein compare


Specific Phenotypes

None in this experiment