Experiment set2S676 for Escherichia coli ECOR38
L-Arabinose
Group: carbon sourceMedia: M9_plus_L-Arabinose + L-Arabinose (20 mM)
Culturing: Ecoli_ECOR38_ML2, 48 well microplate, Aerobic, at 37 (C), shaken=double orbital, continuous, 205cpm
By: Lucas on 12/6/24
Specific Phenotypes
For 4 genes in this experiment
For carbon source L-Arabinose in Escherichia coli ECOR38
For carbon source L-Arabinose across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| L-Arabinose utilization | 4 |
| L-ascorbate utilization (and related gene clusters) | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| L-arabinose degradation I | 4 | 4 | 3 |
| D-arabinose degradation I | 2 | 2 | 1 |
| ribitol degradation I | 2 | 1 | 1 |
| D-arabinose degradation V | 3 | 1 | 1 |
| L-lyxose degradation | 4 | 4 | 1 |
| L-ascorbate degradation I (bacterial, anaerobic) | 5 | 5 | 1 |
| L-ascorbate degradation II (bacterial, aerobic) | 7 | 7 | 1 |
| superpathway of pentose and pentitol degradation | 42 | 16 | 4 |