Experiment set2S65 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-8

200 most important genes:

  gene name fitness t score description  
OLJFJH_06785 -5.7 -21.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_06780 -4.8 -18.8 phosphoribosylamine--glycine ligase compare
OLJFJH_11280 -4.8 -18.6 amidophosphoribosyltransferase compare
OLJFJH_10590 -4.7 -9.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_00745 -4.5 -20.3 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_17720 -4.5 -9.2 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_10645 -4.5 -6.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_06105 -4.4 -18.2 methylenetetrahydrofolate reductase compare
OLJFJH_17630 -4.4 -1.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_17635 -4.4 -10.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_10305 -4.3 -18.2 phosphoribosylformylglycinamidine synthase compare
OLJFJH_06480 -4.3 -20.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
OLJFJH_06115 -4.2 -16.9 acetylornithine deacetylase compare
OLJFJH_06130 -4.2 -21.2 argininosuccinate lyase compare
OLJFJH_16950 -4.0 -2.8 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_02410 -4.0 -10.3 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_10500 -4.0 -5.5 IMP dehydrogenase compare
OLJFJH_09115 -4.0 -15.9 amino-acid N-acetyltransferase compare
OLJFJH_04030 -4.0 -16.8 bifunctional succinylornithine transaminase/acetylornithine transaminase compare
OLJFJH_03650 -4.0 -17.8 homoserine O-succinyltransferase compare
OLJFJH_15475 -4.0 -17.6 penicillin-binding protein activator LpoB compare
OLJFJH_08880 -4.0 -10.9 diaminopimelate decarboxylase compare
OLJFJH_15670 -3.9 -10.4 dihydroorotase compare
OLJFJH_05465 -3.9 -13.6 thiol:disulfide interchange protein DsbA compare
OLJFJH_01395 -3.8 -15.7 carbamoyl-phosphate synthase large subunit compare
OLJFJH_01490 -3.8 -12.5 homoserine kinase compare
OLJFJH_01400 -3.8 -18.5 carbamoyl phosphate synthase small subunit compare
OLJFJH_06120 -3.8 -6.8 acetylglutamate kinase compare
OLJFJH_15175 -3.8 -18.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
OLJFJH_03580 -3.7 -1.6 transcriptional repressor LexA compare
OLJFJH_09305 -3.7 -16.0 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
OLJFJH_06095 -3.7 -15.5 cystathionine gamma-synthase compare
OLJFJH_01485 -3.6 -11.4 threonine synthase compare
OLJFJH_07335 -3.6 -17.5 ornithine carbamoyltransferase compare
OLJFJH_12165 -3.6 -6.6 imidazole glycerol phosphate synthase subunit HisH compare
OLJFJH_06475 -3.5 -9.1 HTH-type transcriptional regulator MetR compare
OLJFJH_05470 -3.4 -2.4 DNA polymerase I compare
OLJFJH_10215 -3.4 -10.6 RNA polymerase sigma factor RpoE compare
OLJFJH_09310 -3.4 -9.7 phosphoadenylyl-sulfate reductase compare
OLJFJH_01595 -3.4 -9.1 phosphoserine phosphatase compare
OLJFJH_06125 -3.4 -16.2 argininosuccinate synthase compare
OLJFJH_13480 -3.4 -8.3 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
OLJFJH_12150 -3.3 -6.9 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
OLJFJH_09335 -3.3 -10.0 Adenylyl-sulfate kinase compare
OLJFJH_18395 -3.3 -4.8 fluoride efflux transporter CrcB compare
OLJFJH_07330 -3.3 -15.2 aspartate carbamoyltransferase compare
OLJFJH_05615 -3.3 -2.6 Conserved uncharacterized protein compare
OLJFJH_04080 -3.3 -4.9 adenine-specific DNA-methyltransferase compare
OLJFJH_09300 -3.3 -16.6 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
OLJFJH_12170 -3.2 -14.0 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
OLJFJH_12185 -3.2 -13.0 ATP phosphoribosyltransferase compare
OLJFJH_13470 -3.2 -12.4 tryptophan synthase subunit alpha compare
OLJFJH_12175 -3.2 -10.6 histidinol-phosphate transaminase compare
OLJFJH_05510 -3.2 -7.8 ribosome-dependent GTPase TypA compare
OLJFJH_09590 -3.1 -3.2 carbon storage regulator CsrA compare
OLJFJH_06515 -3.1 -2.3 twin-arginine translocase subunit TatA compare
OLJFJH_07015 -3.1 -4.7 stringent starvation protein A compare
OLJFJH_12180 -3.1 -17.2 histidinol dehydrogenase compare
OLJFJH_09320 -3.0 -16.4 siroheme synthase CysG compare
OLJFJH_08735 -3.0 -12.0 phosphoglycerate dehydrogenase compare
OLJFJH_05835 -3.0 -5.8 glycosyl transferase compare
OLJFJH_13570 -3.0 -7.1 orotidine-5'-phosphate decarboxylase compare
OLJFJH_13475 -3.0 -14.9 tryptophan synthase subunit beta compare
OLJFJH_01300 -3.0 -6.2 3-isopropylmalate dehydratase small subunit compare
OLJFJH_06995 -3.0 -4.2 Z-ring associated protein ZapG compare
OLJFJH_16980 -2.9 -17.7 citrate synthase compare
OLJFJH_13485 -2.9 -7.7 Anthranilate phosphoribosyltransferase compare
OLJFJH_10465 -2.8 -3.3 outer membrane protein assembly factor BamB compare
OLJFJH_15990 -2.8 -8.8 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_06225 -2.8 -15.9 branched-chain-amino-acid transaminase compare
OLJFJH_05920 -2.8 -5.5 serine O-acetyltransferase compare
OLJFJH_12155 -2.7 -9.2 imidazole glycerol phosphate synthase subunit HisF compare
OLJFJH_01290 -2.7 -19.6 3-isopropylmalate dehydrogenase compare
OLJFJH_12965 -2.7 -2.4 Lysine exporter LysO compare
OLJFJH_06535 -2.7 -6.2 transcription/translation regulatory transformer protein RfaH compare
OLJFJH_12670 -2.7 -17.4 flippase compare
OLJFJH_06985 -2.7 -14.0 outer membrane-stress sensor serine endopeptidase DegS compare
OLJFJH_05770 -2.6 -5.8 orotate phosphoribosyltransferase compare
OLJFJH_01295 -2.6 -13.1 3-isopropylmalate dehydratase large subunit compare
OLJFJH_05105 -2.6 -10.8 glyoxylate/hydroxypyruvate reductase GhrB compare
OLJFJH_07675 -2.5 -12.6 outer membrane channel protein TolC compare
OLJFJH_12160 -2.5 -1.4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_09330 -2.5 -14.0 sulfate adenylyltransferase subunit CysN compare
OLJFJH_10865 -2.4 -1.8 cysteine synthase A compare
OLJFJH_05910 -2.4 -8.2 protein-export chaperone SecB compare
OLJFJH_06525 -2.4 -3.6 Sec-independent protein translocase subunit TatC compare
OLJFJH_12885 -2.4 -9.9 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_13345 -2.4 -4.9 4-oxalomesaconate tautomerase compare
OLJFJH_03945 -2.3 -1.5 peptidylprolyl isomerase compare
OLJFJH_01285 -2.3 -10.4 2-isopropylmalate synthase compare
OLJFJH_13495 -2.3 -13.1 anthranilate synthase component 1 compare
OLJFJH_01380 -2.3 -6.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
OLJFJH_05870 -2.2 -8.1 lipopolysaccharide biosynthesis protein compare
OLJFJH_09065 -2.2 -2.1 thymidylate synthase compare
OLJFJH_05495 -2.2 -10.6 nitrogen regulation protein NR(I) compare
OLJFJH_15205 -2.2 -6.1 muramoyltetrapeptide carboxypeptidase compare
OLJFJH_09325 -2.2 -9.4 sulfate adenylyltransferase subunit CysD compare
OLJFJH_06415 -2.2 -6.7 tyrosine recombinase XerC compare
OLJFJH_13530 -2.1 -3.2 HTH-type transcriptional regulator CysB compare
OLJFJH_07830 -2.1 -5.3 TonB system transport protein ExbD compare
OLJFJH_05850 -2.1 -10.9 deacetylase compare
OLJFJH_15115 -2.1 -1.8 YgdI/YgdR family lipoprotein compare
OLJFJH_03260 -2.1 -8.2 translation factor (SUA5) compare
OLJFJH_09625 -2.0 -9.6 glutamate--cysteine ligase compare
OLJFJH_16180 -2.0 -7.9 cell division protein FtsK compare
OLJFJH_13120 -2.0 -2.8 septum site-determining protein MinC compare
OLJFJH_10860 -2.0 -3.2 phosphocarrier protein Hpr compare
OLJFJH_08570 -2.0 -8.1 glutathione synthase compare
OLJFJH_00595 -2.0 -7.2 sigma E protease regulator RseP compare
OLJFJH_04160 -2.0 -6.1 two-component system response regulator OmpR compare
OLJFJH_10200 -2.0 -6.4 ATP-dependent RNA helicase SrmB compare
OLJFJH_16780 -2.0 -4.5 6-phosphogluconolactonase compare
OLJFJH_13490 -1.9 -4.5 anthranilate synthase component II compare
OLJFJH_10170 -1.9 -2.3 outer membrane protein assembly factor BamE compare
OLJFJH_15725 -1.9 -6.2 glucan biosynthesis protein G compare
OLJFJH_06230 -1.9 -13.4 dihydroxy-acid dehydratase compare
OLJFJH_04155 -1.8 -5.1 two-component system sensor histidine kinase EnvZ compare
OLJFJH_02090 -1.8 -9.1 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_03710 -1.8 -0.9 peptide deformylase compare
OLJFJH_13510 -1.8 -7.2 23S rRNA pseudouridine(2605) synthase RluB compare
OLJFJH_15720 -1.8 -12.1 glucan biosynthesis glucosyltransferase H compare
OLJFJH_09725 -1.8 -8.0 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
OLJFJH_11445 -1.8 -5.0 NADH-quinone oxidoreductase subunit NuoI compare
OLJFJH_13240 -1.7 -5.8 asparaginase compare
OLJFJH_17775 -1.7 -10.5 EamA-like transporter family compare
OLJFJH_01495 -1.7 -10.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
OLJFJH_03200 -1.7 -9.0 TonB-dependent siderophore receptor compare
OLJFJH_06245 -1.7 -12.0 ketol-acid reductoisomerase compare
OLJFJH_17850 -1.7 -11.0 efflux transporter periplasmic adaptor subunit compare
OLJFJH_05860 -1.6 -4.9 glycosyl transferase compare
OLJFJH_05865 -1.6 -7.0 ligase compare
OLJFJH_00700 -1.6 -3.3 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
OLJFJH_07025 -1.6 -11.7 sulfite reductase subunit alpha compare
OLJFJH_07215 -1.6 -4.1 preprotein translocase subunit SecG compare
OLJFJH_11425 -1.6 -2.1 NADH-quinone oxidoreductase subunit NuoE compare
OLJFJH_07030 -1.6 -13.2 glutamate synthase large subunit compare
OLJFJH_11560 -1.5 -3.9 transcriptional regulator RcsB compare
OLJFJH_07070 -1.5 -6.1 RNA polymerase factor sigma-54 compare
OLJFJH_08875 -1.5 -7.9 LysR family transcriptional regulator compare
OLJFJH_12070 -1.5 -9.2 Amylovoran biosynthesis glycosyltransferase AmsK compare
OLJFJH_00695 -1.5 -3.7 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
OLJFJH_06330 -1.5 -7.7 ECA oligosaccharide polymerase compare
OLJFJH_16965 -1.5 -2.9 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_10855 -1.5 -9.7 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_16955 -1.5 -2.8 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_13350 -1.4 -4.2 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_00690 -1.4 -5.3 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
OLJFJH_10220 -1.4 -0.9 anti-sigma-E factor RseA compare
OLJFJH_01475 -1.4 -7.2 transaldolase B compare
OLJFJH_18020 -1.4 -2.9 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_11440 -1.4 -5.0 NADH-quinone oxidoreductase subunit NuoH compare
OLJFJH_05635 -1.4 -2.3 beta family protein compare
OLJFJH_07825 -1.4 -4.8 tol-pal system-associated acyl-CoA thioesterase compare
OLJFJH_12130 -1.4 -2.1 glycosyltransferase family 1 protein compare
OLJFJH_04305 -1.4 -1.0 DUF2756 domain-containing protein compare
OLJFJH_16040 -1.4 -8.6 Outer membrane porin OmpC/OmpF/PhoE compare
OLJFJH_11470 -1.4 -7.8 NADH-quinone oxidoreductase subunit NuoN compare
OLJFJH_18015 -1.3 -4.4 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_17960 -1.3 -6.1 endopeptidase La compare
OLJFJH_09610 -1.3 -0.7 tRNA-Arg compare
OLJFJH_12075 -1.3 -8.2 Amylovoran biosynthesis protein AmsL compare
OLJFJH_07055 -1.3 -7.0 RNase adapter RapZ compare
OLJFJH_05730 -1.3 -0.7 hypothetical protein compare
OLJFJH_11435 -1.3 -7.7 NADH-quinone oxidoreductase subunit NuoG compare
OLJFJH_08730 -1.2 -4.6 hypothetical protein compare
OLJFJH_11420 -1.2 -6.1 NADH-quinone oxidoreductase subunit C/D compare
OLJFJH_11460 -1.2 -8.2 NADH-quinone oxidoreductase subunit L compare
OLJFJH_03565 -1.2 -6.6 zinc uptake transcriptional repressor Zur compare
OLJFJH_08795 -1.2 -8.1 hydrolase compare
OLJFJH_09575 -1.2 -3.3 recombinase RecA compare
OLJFJH_16960 -1.2 -4.4 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_08645 -1.2 -8.3 transketolase compare
OLJFJH_05915 -1.2 -6.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
OLJFJH_01370 -1.2 -2.7 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_10820 -1.2 -3.9 sulfate/thiosulfate ABC transporter permease CysT compare
OLJFJH_17855 -1.2 -9.1 multidrug efflux RND transporter permease subunit AcrB compare
OLJFJH_09390 -1.2 -0.7 Transposase compare
OLJFJH_11775 -1.1 -3.9 1-phosphofructokinase compare
OLJFJH_02470 -1.1 -8.4 ribonuclease R compare
OLJFJH_07320 -1.1 -5.6 2-iminobutanoate/2-iminopropanoate deaminase compare
OLJFJH_18025 -1.1 -2.8 heme o synthase compare
OLJFJH_07275 -1.1 -2.3 DEAD/DEAH family ATP-dependent RNA helicase compare
OLJFJH_13115 -1.1 -2.5 septum site-determining protein MinD compare
OLJFJH_14950 -1.1 -5.5 redox-regulated ATPase YchF compare
OLJFJH_06270 -1.1 -3.6 thioredoxin TrxA compare
OLJFJH_13430 -1.1 -6.3 cardiolipin synthase ClsA compare
OLJFJH_10825 -1.1 -5.7 sulfate/thiosulfate ABC transporter permease CysW compare
OLJFJH_13880 -1.1 -3.7 two-component system response regulator RstA compare
OLJFJH_01895 -1.1 -5.6 type VI secretion system baseplate subunit TssK compare
OLJFJH_11625 -1.1 -3.1 Conserved uncharacterized protein compare
OLJFJH_11450 -1.1 -2.9 NADH-quinone oxidoreductase subunit J compare
OLJFJH_05500 -1.1 -5.9 nitrogen regulation protein NR(II) compare
OLJFJH_13355 -1.1 -6.9 4-oxalmesaconate hydratase compare
OLJFJH_10830 -1.1 -6.1 sulfate/thiosulfate ABC transporter ATP-binding protein CysA compare
OLJFJH_11410 -1.1 -4.7 NADH-quinone oxidoreductase subunit NuoA compare
OLJFJH_07060 -1.0 -4.2 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_05225 -1.0 -6.1 phosphate ABC transporter permease PstC compare
OLJFJH_11415 -1.0 -5.9 NADH-quinone oxidoreductase subunit B compare
OLJFJH_11465 -1.0 -5.4 NADH-quinone oxidoreductase subunit M compare
OLJFJH_12105 -1.0 -2.1 ABC transporter permease compare


Specific Phenotypes

None in this experiment