Experiment set2S58 for Erwinia amylovora T8

Compare to:

Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

200 most important genes:

  gene name fitness t score description  
OLJFJH_17430 -5.6 -1.1 OsmC family peroxiredoxin compare
OLJFJH_12285 -5.1 -1.0 hypothetical protein compare
OLJFJH_10940 -4.9 -0.9 tRNA-Ala compare
OLJFJH_09045 -4.7 -0.9 hypothetical protein compare
OLJFJH_14015 -4.7 -0.9 Putative sugar transport protein compare
OLJFJH_09530 -4.7 -2.5 type III secretion system protein compare
OLJFJH_13490 -4.7 -1.7 anthranilate synthase component II compare
OLJFJH_16185 -4.6 -1.5 leucine-responsive transcriptional regulator Lrp compare
OLJFJH_08340 -4.5 -0.9 hypothetical protein compare
OLJFJH_12965 -4.1 -1.4 Lysine exporter LysO compare
OLJFJH_03950 -4.1 -0.8 DUF2387 domain-containing protein compare
OLJFJH_11065 -4.0 -1.3 GNAT family N-acetyltransferase compare
OLJFJH_02245 -3.9 -1.3 YqjK-like family protein compare
OLJFJH_01850 -3.9 -1.0 Putative cytoplasmic protein compare
OLJFJH_03170 -3.8 -0.7 hypothetical protein compare
OLJFJH_02085 -3.5 -1.3 transcriptional regulator GutM compare
OLJFJH_10685 -3.5 -0.9 Colicin immunity protein/pyocin immunity protein compare
OLJFJH_05645 -3.4 -1.1 hypothetical protein compare
OLJFJH_10220 -3.4 -0.6 anti-sigma-E factor RseA compare
OLJFJH_02410 -3.4 -4.7 3'(2') 5'-bisphosphate nucleotidase CysQ compare
OLJFJH_15635 -3.3 -0.9 anti-sigma-28 factor FlgM compare
OLJFJH_05730 -3.3 -0.6 hypothetical protein compare
OLJFJH_13580 -3.3 -2.2 hypothetical protein compare
OLJFJH_16870 -3.3 -1.1 glycosyltransferase compare
OLJFJH_16430 -3.3 -0.6 hypothetical protein compare
OLJFJH_09445 -3.2 -0.9 AraC family transcriptional regulator compare
OLJFJH_15000 -3.2 -0.6 type III secretion system export apparatus subunit SctT compare
OLJFJH_01710 -3.2 -1.6 hypothetical protein compare
OLJFJH_17650 -3.2 -0.6 ABC transporter ATP-binding protein compare
OLJFJH_09390 -3.2 -0.6 Transposase compare
OLJFJH_12910 -3.1 -0.6 YebG protein compare
OLJFJH_09610 -3.0 -0.6 tRNA-Arg compare
OLJFJH_10715 -3.0 -0.6 hypothetical protein compare
OLJFJH_10740 -3.0 -0.8 protein YpfM compare
OLJFJH_13970 -2.9 -1.7 hypothetical protein compare
OLJFJH_14245 -2.8 -1.7 hypothetical protein compare
OLJFJH_15115 -2.7 -0.9 YgdI/YgdR family lipoprotein compare
OLJFJH_10720 -2.6 -0.7 Uncharacterised protein family (UPF0370) compare
OLJFJH_10590 -2.6 -5.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_17445 -2.6 -0.9 YnfU family zinc-binding protein compare
OLJFJH_11455 -2.6 -0.7 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_13040 -2.5 -0.7 transcription antiterminator/RNA stability regulator CspE compare
OLJFJH_15075 -2.5 -0.7 type III secretion system inner rod subunit SctI compare
OLJFJH_02335 -2.5 -1.5 cytoplasmic protein compare
OLJFJH_05565 -2.5 -0.9 DNA-directed RNA polymerase subunit omega compare
OLJFJH_15090 -2.5 -0.6 Conserved uncharacterized protein compare
OLJFJH_09965 -2.5 -0.7 flagellar biosynthetic protein FliO compare
OLJFJH_13120 -2.5 -1.0 septum site-determining protein MinC compare
OLJFJH_03535 -2.5 -0.6 hypothetical protein compare
OLJFJH_05635 -2.4 -1.5 beta family protein compare
OLJFJH_13240 -2.4 -4.6 asparaginase compare
OLJFJH_13585 -2.4 -0.8 hypothetical protein compare
OLJFJH_08615 -2.3 -1.0 putative double-glycine leader peptidase C39-like (CLD) domain compare
OLJFJH_15060 -2.3 -0.6 type III secretion system protein compare
OLJFJH_17875 -2.2 -2.0 Hha toxicity modulator TomB compare
OLJFJH_14385 -2.2 -0.6 electron transport complex subunit RsxE compare
OLJFJH_01945 -2.2 -0.6 DUF1435 domain-containing protein compare
OLJFJH_14925 -2.1 -0.6 hypothetical protein compare
OLJFJH_03635 -2.1 -2.4 hypothetical protein compare
OLJFJH_06640 -2.0 -2.2 elongation factor Tu compare
OLJFJH_11675 -2.0 -1.3 preprotein translocase compare
OLJFJH_01420 -2.0 -1.1 signal peptidase II compare
OLJFJH_11670 -2.0 -0.6 Tyrosine recombinase xerD compare
OLJFJH_16450 -2.0 -1.5 DksA/TraR family C4-type zinc finger protein compare
OLJFJH_00840 -2.0 -1.0 YacC family pilotin-like protein compare
OLJFJH_15545 -2.0 -1.9 phosphate acyltransferase PlsX compare
OLJFJH_18015 -1.9 -3.3 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_03270 -1.9 -2.5 LysR family transcriptional regulator compare
OLJFJH_17675 -1.9 -0.7 colicin immunity protein Cui compare
OLJFJH_06785 -1.9 -7.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_03550 -1.9 -1.2 pyocin activator protein PrtN compare
OLJFJH_05465 -1.9 -5.3 thiol:disulfide interchange protein DsbA compare
OLJFJH_04990 -1.9 -0.9 mannitol-1-phosphate 5-dehydrogenase compare
OLJFJH_00745 -1.9 -7.2 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_14195 -1.8 -1.1 hypothetical protein compare
OLJFJH_14885 -1.8 -2.7 invasion regulator SirB1 compare
OLJFJH_14660 -1.8 -3.4 endopeptidase compare
OLJFJH_07265 -1.8 -2.8 polyribonucleotide nucleotidyltransferase compare
OLJFJH_03945 -1.8 -0.7 peptidylprolyl isomerase compare
OLJFJH_15670 -1.7 -2.7 dihydroorotase compare
OLJFJH_09105 -1.7 -1.2 exodeoxyribonuclease V subunit alpha compare
OLJFJH_05510 -1.7 -4.0 ribosome-dependent GTPase TypA compare
OLJFJH_16055 -1.7 -1.8 DUF882 domain-containing protein compare
OLJFJH_03055 -1.7 -1.3 hypothetical protein compare
OLJFJH_10735 -1.7 -1.4 hypothetical protein compare
OLJFJH_02500 -1.7 -3.5 RNA chaperone Hfq compare
OLJFJH_02235 -1.7 -1.3 DUF883 domain-containing protein compare
OLJFJH_10335 -1.7 -2.0 nitrogen regulatory protein P-II compare
OLJFJH_03585 -1.7 -1.8 diacylglycerol kinase compare
OLJFJH_13350 -1.6 -3.1 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase compare
OLJFJH_16495 -1.6 -1.6 hypothetical protein compare
OLJFJH_14370 -1.6 -0.7 electron transport complex subunit RsxC compare
OLJFJH_15740 -1.6 -2.0 hypothetical protein compare
OLJFJH_05535 -1.5 -2.1 23S rRNA pseudouridine(2604) synthase RluF compare
OLJFJH_07035 -1.5 -2.6 aerobic respiration two-component sensor histidine kinase ArcB compare
OLJFJH_13865 -1.5 -1.4 Peptidoglycan/LPS O-acetylase OafA/YrhL contains acyltransferase and SGNH-hydrolase domains compare
OLJFJH_00480 -1.5 -2.8 methionine ABC transporter ATP-binding protein MetN compare
OLJFJH_17635 -1.5 -4.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_10850 -1.5 -1.5 PTS glucose transporter subunit IIA compare
OLJFJH_16575 -1.5 -2.9 helix-turn-helix-type transcriptional regulator compare
OLJFJH_09575 -1.5 -2.2 recombinase RecA compare
OLJFJH_03485 -1.5 -1.9 translocase compare
OLJFJH_10115 -1.5 -1.3 flagellar transcriptional regulator FlhC compare
OLJFJH_11280 -1.5 -4.1 amidophosphoribosyltransferase compare
OLJFJH_10430 -1.5 -0.9 nucleoside-diphosphate kinase compare
OLJFJH_01960 -1.5 -1.6 DUF2946 domain-containing protein compare
OLJFJH_08880 -1.5 -3.5 diaminopimelate decarboxylase compare
OLJFJH_01860 -1.5 -0.6 hypothetical protein compare
OLJFJH_05470 -1.4 -0.8 DNA polymerase I compare
OLJFJH_11875 -1.4 -1.9 cytidine deaminase compare
OLJFJH_10855 -1.4 -4.9 phosphoenolpyruvate-protein phosphotransferase PtsI compare
OLJFJH_12535 -1.4 -1.2 flagellar export chaperone FliS compare
OLJFJH_06525 -1.4 -1.0 Sec-independent protein translocase subunit TatC compare
OLJFJH_07525 -1.4 -0.9 transcriptional regulator compare
OLJFJH_09940 -1.4 -1.0 flagellar export protein FliJ compare
OLJFJH_06780 -1.3 -5.4 phosphoribosylamine--glycine ligase compare
OLJFJH_15620 -1.3 -2.3 flagellar basal body rod protein FlgC compare
OLJFJH_15420 -1.3 -1.5 transcriptional regulator RcsA compare
OLJFJH_18555 -1.3 -1.0 MurR/RpiR family transcriptional regulator HpxU compare
OLJFJH_13560 -1.3 -2.7 DUF1049 domain-containing protein compare
OLJFJH_15990 -1.3 -3.0 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_05950 -1.3 -5.2 CDF family cation-efflux transporter FieF compare
OLJFJH_18270 -1.3 -1.9 shikimate kinase AroL compare
OLJFJH_07185 -1.3 -1.7 transcription elongation factor GreA compare
OLJFJH_10885 -1.3 -1.4 cytoplasmic protein compare
OLJFJH_10170 -1.3 -0.7 outer membrane protein assembly factor BamE compare
OLJFJH_13835 -1.3 -2.1 acid resistance repetitive basic protein Asr compare
OLJFJH_15675 -1.2 -1.2 DNA damage-inducible protein I compare
OLJFJH_08630 -1.2 -1.7 Putative secreted protein compare
OLJFJH_10305 -1.2 -4.2 phosphoribosylformylglycinamidine synthase compare
OLJFJH_09815 -1.2 -2.7 hypothetical protein compare
OLJFJH_12885 -1.2 -2.1 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_03030 -1.2 -0.8 hypothetical protein compare
OLJFJH_07540 -1.2 -1.1 integrase core domain-containing protein compare
OLJFJH_03025 -1.2 -0.9 type VI secretion system tip protein VgrG compare
OLJFJH_12940 -1.2 -1.1 DUF2511 domain-containing protein compare
OLJFJH_00695 -1.2 -1.5 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
OLJFJH_14475 -1.2 -0.9 Putative NADH-flavin reductase compare
OLJFJH_15330 -1.2 -0.8 hypothetical protein compare
OLJFJH_05220 -1.2 -1.8 phosphate ABC transporter permease PstA compare
OLJFJH_15475 -1.2 -4.0 penicillin-binding protein activator LpoB compare
OLJFJH_06205 -1.2 -0.9 Protein of unknown function DUF compare
OLJFJH_08835 -1.2 -1.3 site-specific tyrosine recombinase XerD compare
OLJFJH_16435 -1.2 -1.8 outer membrane protein OmpX compare
OLJFJH_06250 -1.2 -1.1 peptidylprolyl isomerase PpiC compare
OLJFJH_10500 -1.2 -2.7 IMP dehydrogenase compare
OLJFJH_07055 -1.2 -4.6 RNase adapter RapZ compare
OLJFJH_18260 -1.2 -1.6 IclR family transcriptional regulator compare
OLJFJH_17720 -1.2 -1.7 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK compare
OLJFJH_18120 -1.1 -1.2 preprotein translocase subunit YajC compare
OLJFJH_13140 -1.1 -0.8 YcgN family cysteine cluster protein compare
OLJFJH_04185 -1.1 -2.0 DNA utilization protein GntX compare
OLJFJH_16260 -1.1 -2.5 lipoprotein compare
OLJFJH_16395 -1.1 -2.1 molybdopterin-synthase adenylyltransferase MoeB compare
OLJFJH_16900 -1.1 -1.9 cell division protein CpoB compare
OLJFJH_11995 -1.1 -1.8 Uncharacterized protein in cps region ORF2 compare
OLJFJH_05910 -1.1 -2.7 protein-export chaperone SecB compare
OLJFJH_07330 -1.1 -3.4 aspartate carbamoyltransferase compare
OLJFJH_04035 -1.1 -3.0 aminodeoxychorismate synthase component II compare
OLJFJH_15705 -1.1 -1.7 lipid A biosynthesis lauroyl acyltransferase compare
OLJFJH_01400 -1.1 -4.3 carbamoyl phosphate synthase small subunit compare
OLJFJH_05690 -1.1 -0.6 hypothetical protein compare
OLJFJH_14445 -1.1 -1.9 Glycine zipper 2TM domain-containing protein compare
OLJFJH_07060 -1.1 -1.7 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_12915 -1.0 -1.7 sugar phosphate isomerase/epimerase compare
OLJFJH_13335 -1.0 -0.5 heme-binding protein compare
OLJFJH_16740 -1.0 -1.4 ABC transporter ATP-binding protein compare
OLJFJH_16720 -1.0 -2.2 molybdenum cofactor biosynthesis protein B compare
OLJFJH_03010 -1.0 -0.6 hypothetical protein compare
OLJFJH_05955 -1.0 -3.9 6-phosphofructokinase compare
OLJFJH_16965 -1.0 -1.6 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_18645 -1.0 -5.3 murein transglycosylase D compare
OLJFJH_05980 -1.0 -1.6 phenazine biosynthesis protein PhzF family compare
OLJFJH_11230 -1.0 -1.4 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_13535 -1.0 -2.2 hypothetical protein compare
OLJFJH_03570 -1.0 -1.6 CsbD domain-containing protein compare
OLJFJH_18135 -1.0 -1.2 glycosyltransferase compare
OLJFJH_14105 -1.0 -2.1 DUF4385 domain-containing protein compare
OLJFJH_08555 -1.0 -1.5 peroxiredoxin compare
OLJFJH_18395 -1.0 -1.2 fluoride efflux transporter CrcB compare
OLJFJH_08275 -1.0 -0.8 hypothetical protein compare
OLJFJH_09310 -1.0 -2.7 phosphoadenylyl-sulfate reductase compare
OLJFJH_03395 -1.0 -1.2 hypothetical protein compare
OLJFJH_08290 -1.0 -1.8 hypothetical protein compare
OLJFJH_05390 -1.0 -3.1 D-ribose pyranase compare
OLJFJH_17215 -0.9 -2.6 ribosome silencing factor compare
OLJFJH_10675 -0.9 -0.8 hypothetical protein compare
OLJFJH_12495 -0.9 -2.4 hypothetical protein compare
OLJFJH_11450 -0.9 -1.3 NADH-quinone oxidoreductase subunit J compare
OLJFJH_14120 -0.9 -0.7 hypothetical protein compare
OLJFJH_10045 -0.9 -0.9 flagellar basal body rod protein FlgB compare
OLJFJH_08420 -0.9 -1.7 GIY-YIG domain-containing protein compare
OLJFJH_18495 -0.9 -0.9 hypothetical protein compare
OLJFJH_09305 -0.9 -3.0 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
OLJFJH_14390 -0.9 -2.3 endonuclease III compare
OLJFJH_07945 -0.9 -0.7 PTS lactose/cellobiose transporter subunit IIA compare
OLJFJH_13365 -0.9 -1.0 type II 3-dehydroquinate dehydratase compare
OLJFJH_06000 -0.9 -0.8 hypothetical protein compare
OLJFJH_05225 -0.9 -2.9 phosphate ABC transporter permease PstC compare
OLJFJH_16180 -0.9 -2.5 cell division protein FtsK compare


Specific Phenotypes

For 1 genes in this experiment